Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 3.8e-157 558.1 287 100.0
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 4.8e-59 232.3 264 53.4
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 6.9e-58 228.4 242 53.7
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 4.5e-57 225.7 266 51.1
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 2.2e-56 223.4 269 50.2
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 5.0e-56 222.2 262 52.7
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 4.2e-55 219.2 265 50.2
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 6.1e-54 215.3 280 50.4
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.0e-53 214.5 267 51.7
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 1.8e-53 213.8 280 47.1
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 5.7e-52 208.8 277 46.2
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 1.3e-51 207.6 272 46.3
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 1.3e-51 207.6 272 46.3
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 1.3e-51 207.6 272 46.3
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 2.2e-51 206.8 244 49.6
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 2.8e-51 206.5 250 50.4
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 2.8e-51 206.5 267 49.8
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 6.3e-51 205.3 289 45.0
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 6.3e-51 205.3 202 57.4
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 1.1e-50 204.5 271 47.2
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 1.4e-50 204.1 269 48.0
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 1.8e-50 203.8 279 46.6
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 4.1e-50 202.6 208 53.4
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 1.2e-49 201.1 271 46.1
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 1.5e-49 200.7 266 46.2
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 2.6e-49 199.9 254 46.5
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 3.5e-49 199.5 282 45.4
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 5.9e-49 198.7 223 50.7
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 2.9e-48 196.4 264 47.0
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 1.4e-47 194.1 227 49.8
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 1.4e-47 194.1 260 46.9
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 3.2e-47 193.0 281 44.1
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 5.5e-47 192.2 272 45.6
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 9.4e-47 191.4 269 45.0
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 6.1e-46 188.7 256 43.8
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 8.0e-46 188.3 216 50.0
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 1.4e-45 187.6 238 47.1
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 1.8e-45 187.2 270 47.4
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 3.0e-45 186.4 227 46.7
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 6.7e-45 185.3 208 51.9
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 2.6e-44 183.3 212 48.1
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 4.4e-44 182.6 235 44.7
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 7.4e-44 181.8 179 53.1
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 7.4e-44 181.8 253 45.1
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 7.4e-44 181.8 158 59.5
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.2e-43 180.3 246 45.5
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 2.8e-43 179.9 249 43.4
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 2.8e-43 179.9 177 53.1
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 3.7e-43 179.5 222 49.1
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 3.7e-43 179.5 144 59.7
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 4.8e-43 179.1 175 57.7
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.1e-42 177.9 210 44.8
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 1.8e-42 177.2 261 44.4
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 3.1e-42 176.4 308 39.3
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 4.1e-42 176.0 148 58.8
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 4.1e-42 176.0 246 43.5
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.3e-42 175.6 247 43.3
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 7.0e-42 175.3 194 49.0
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 7.0e-42 175.3 233 47.2
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 1.2e-41 174.5 321 37.4
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 1.2e-41 174.5 235 44.7
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.6e-41 174.1 249 42.2
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 5.9e-41 172.2 210 49.0
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 1.0e-40 171.4 155 56.8
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 3.8e-40 169.5 252 43.7
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 5.0e-40 169.1 205 47.3
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 2.5e-39 166.8 216 45.4
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 4.2e-39 166.0 202 48.0
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 7.2e-39 165.2 210 47.6
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 2.1e-38 163.7 140 55.0
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 3.6e-38 162.9 271 40.6
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 3.6e-38 162.9 122 61.5
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 8.8e-37 158.3 233 45.5
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 1.2e-36 157.9 155 49.7
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.5e-36 157.5 130 60.0
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 3.7e-35 152.9 246 39.4
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 1.1e-34 151.4 127 59.1
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 5.3e-34 149.1 160 49.4
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 7.7e-33 145.2 105 63.8
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 1.3e-32 144.4 229 42.4
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.3e-32 144.4 161 47.2
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 2.2e-32 143.7 232 43.5
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 1.0e-29 134.8 292 34.9
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 4.0e-29 132.9 208 39.4
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 7.5e-28 128.6 155 47.7
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 3.7e-27 126.3 169 43.2
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 1.1e-26 124.8 205 41.5
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 3.1e-26 123.2 222 34.7
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 5.9e-25 119.0 221 38.9
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.1e-23 114.8 202 40.1
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 3.6e-22 109.8 274 32.5
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 5.2e-21 105.9 296 30.4
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 7.5e-20 102.1 123 43.1
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 2.8e-19 100.1 249 31.3
AL3G14490 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 1.7e-11 74.3 52 65.4
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 2.2e-11 73.9 52 65.4
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 6.0e-09 65.9 148 37.8
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 1.0e-08 65.1 163 32.5
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 3.6e-06 56.6 150 31.3


User provided reference genes

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