Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 8.5e-111 403.7 203 100.0
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 4.4e-99 364.8 186 98.4
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 7.8e-56 221.1 221 56.6
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 7.8e-56 221.1 192 58.9
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 1.1e-54 217.2 195 58.5
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 1.3e-53 213.8 195 58.5
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.3e-53 213.8 196 57.1
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 2.1e-53 213.0 194 56.2
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 2.1e-53 213.0 178 61.2
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 2.4e-52 209.5 194 56.2
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 2.0e-51 206.5 195 56.9
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 3.4e-51 205.7 188 57.4
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 3.4e-51 205.7 191 56.5
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 4.4e-51 205.3 221 52.5
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.3e-50 203.8 194 55.2
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.3e-50 203.8 215 53.0
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 1.7e-50 203.4 187 56.1
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 1.1e-49 200.7 194 52.1
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 1.9e-49 199.9 195 54.4
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 1.9e-49 199.9 188 56.4
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 1.9e-49 199.9 195 52.8
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.4e-49 199.5 203 53.2
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 2.4e-49 199.5 156 62.8
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 3.2e-49 199.1 194 51.5
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 7.1e-49 198.0 203 53.2
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 7.1e-49 198.0 156 62.2
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 9.3e-49 197.6 197 55.3
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 9.3e-49 197.6 191 51.3
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.6e-48 196.8 194 50.0
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 2.1e-48 196.4 203 52.7
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 2.7e-48 196.1 193 56.0
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.7e-48 196.1 195 51.3
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 4.6e-48 195.3 199 54.3
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.0e-47 194.1 194 49.5
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.7e-47 193.4 194 50.0
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 6.6e-47 191.4 194 56.2
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 9.6e-46 187.6 169 57.4
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.3e-45 187.2 176 55.7
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 6.2e-45 184.9 195 50.8
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 1.8e-44 183.3 183 53.0
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.8e-44 183.3 187 54.0
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.8e-44 183.3 194 53.1
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 2.4e-44 183.0 197 48.2
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 5.3e-44 181.8 193 50.3
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 5.3e-44 181.8 193 52.8
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 6.9e-44 181.4 194 52.6
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 9.0e-44 181.0 177 54.2
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 1.2e-43 180.6 195 52.3
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 1.2e-43 180.6 198 52.5
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 1.5e-43 180.3 193 52.3
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 2.6e-43 179.5 189 51.9
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 2.6e-43 179.5 176 51.7
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 2.6e-43 179.5 205 50.2
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 3.4e-43 179.1 194 49.0
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 4.5e-43 178.7 185 51.4
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 7.6e-43 177.9 194 48.5
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 9.9e-43 177.6 197 49.7
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 1.3e-42 177.2 192 52.6
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 2.9e-42 176.0 194 51.0
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 2.9e-42 176.0 171 56.1
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 4.9e-42 175.3 195 52.3
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 8.4e-42 174.5 195 48.2
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 1.1e-41 174.1 194 47.9
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 1.1e-41 174.1 192 50.0
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 2.4e-41 172.9 195 51.3
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.2e-41 172.2 194 51.0
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 9.3e-41 171.0 192 48.4
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 1.2e-40 170.6 218 46.8
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 1.2e-40 170.6 225 42.2
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 1.6e-40 170.2 172 52.9
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 7.9e-40 167.9 194 44.3
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 7.9e-40 167.9 195 49.2
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 1.3e-39 167.2 193 49.7
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.3e-39 167.2 192 47.9
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 1.3e-39 167.2 189 49.2
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 3.9e-39 165.6 194 49.0
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 5.1e-39 165.2 184 49.5
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 1.1e-38 164.1 184 47.3
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 1.1e-38 164.1 211 43.6
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.5e-38 163.7 195 47.2
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.5e-38 162.9 193 45.6
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 3.3e-38 162.5 193 47.2
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 3.3e-38 162.5 206 43.2
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 4.3e-38 162.2 195 46.2
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 5.6e-38 161.8 183 50.8
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 1.6e-37 160.2 181 49.2
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 2.8e-37 159.5 188 46.8
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 3.7e-37 159.1 197 45.2
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 8.1e-37 157.9 193 47.2
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 1.4e-36 157.1 193 46.6
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 1.8e-36 156.8 188 46.3
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.8e-36 156.8 193 45.6
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 2.4e-36 156.4 195 46.2
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 3.1e-36 156.0 188 47.3
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 3.1e-36 156.0 195 46.2
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 9.0e-36 154.5 185 48.1
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.5e-35 153.7 192 47.4
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.5e-35 153.7 219 43.8
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 4.5e-35 152.1 196 44.9
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.7e-34 150.2 162 46.3
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.8e-34 149.1 134 55.2
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 8.4e-34 147.9 195 42.6
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 2.5e-33 146.4 193 41.5
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 2.5e-33 146.4 196 41.3
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 3.2e-33 146.0 193 41.5
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 4.2e-33 145.6 194 38.7
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 7.1e-33 144.8 193 40.4
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 7.1e-33 144.8 193 38.9
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 7.1e-33 144.8 194 38.7
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 7.1e-33 144.8 195 41.5
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 1.2e-32 144.1 113 58.4
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 1.6e-32 143.7 196 40.8
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 3.5e-32 142.5 193 38.9
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 1.0e-31 141.0 196 40.8
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 2.3e-31 139.8 174 40.8
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 6.7e-31 138.3 144 50.7
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 1.1e-30 137.5 174 40.2
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 3.3e-30 136.0 138 51.4
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 5.7e-30 135.2 129 52.7
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 5.7e-30 135.2 117 53.8
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 4.8e-29 132.1 188 39.4
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 9.0e-28 127.9 192 41.7
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 5.9e-27 125.2 169 45.6
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.5e-25 119.8 96 57.3
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 4.2e-25 119.0 182 39.0
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.5e-24 115.9 189 36.0
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 4.6e-24 115.5 135 43.0
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 2.3e-23 113.2 108 48.1
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 2.3e-23 113.2 196 36.7
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 1.1e-22 110.9 115 46.1
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.1e-22 110.9 197 36.0
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 1.9e-22 110.2 149 42.3
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.6e-21 107.1 175 40.0
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 4.8e-21 105.5 194 35.1
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 6.9e-20 101.7 74 63.5
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 3.4e-19 99.4 91 49.5
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 1.7e-18 97.1 104 40.4
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 1.2e-16 90.9 161 31.1
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 4.6e-16 89.0 74 58.1
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 3.0e-15 86.3 113 40.7
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 1.5e-14 84.0 108 38.0
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 1.3e-13 80.9 112 37.5
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 6.3e-13 78.6 108 37.0
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 6.3e-13 78.6 108 37.0
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 8.2e-13 78.2 112 35.7
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 5.0e-10 68.9 114 31.6
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 6.5e-10 68.6 111 31.5
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 4.7e-08 62.4 113 36.3


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