Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 1.6e-302 1042.0 522 100.0
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 1.9e-207 726.1 498 72.5
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 2.5e-207 725.7 497 72.8
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 5.6e-207 724.5 492 72.2
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 6.9e-205 717.6 512 70.3
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 6.9e-205 717.6 472 75.4
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 1.5e-204 716.5 494 71.3
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 3.4e-204 715.3 467 75.8
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 4.9e-203 711.4 469 74.8
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 2.4e-202 709.1 442 77.1
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 5.4e-202 708.0 470 74.3
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.7e-201 705.7 469 74.2
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 4.6e-201 704.9 466 74.2
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 6.0e-201 704.5 500 70.2
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 1.0e-200 703.7 468 73.7
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.3e-200 702.6 499 69.3
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 5.1e-200 701.4 490 70.4
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.1e-199 700.3 445 76.2
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 4.3e-199 698.4 497 69.4
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 1.3e-198 696.8 442 75.6
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.6e-198 696.4 442 76.0
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 2.1e-198 696.0 446 75.8
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 1.1e-197 693.7 459 74.9
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 2.4e-197 692.6 516 68.0
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 4.0e-197 691.8 445 75.5
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 6.9e-197 691.0 496 69.0
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 6.9e-197 691.0 478 72.4
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 1.2e-196 690.3 500 67.6
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 3.4e-196 688.7 465 74.0
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 4.5e-196 688.3 442 75.3
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 7.6e-196 687.6 479 70.8
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 2.9e-195 685.6 455 71.9
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 8.4e-195 684.1 504 68.1
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 2.4e-194 682.6 483 69.4
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 4.2e-194 681.8 453 71.5
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 5.4e-194 681.4 446 74.0
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 7.1e-194 681.0 500 67.6
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 9.3e-194 680.6 444 72.5
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 1.2e-193 680.2 465 71.4
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 3.5e-193 678.7 444 72.3
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 6.0e-193 677.9 444 72.3
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 6.0e-193 677.9 490 69.2
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 6.0e-193 677.9 462 71.2
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 6.7e-192 674.5 467 69.8
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 1.1e-191 673.7 444 72.3
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 1.5e-191 673.3 442 74.0
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 5.6e-191 671.4 444 73.0
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 7.4e-191 671.0 463 71.1
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 1.3e-190 670.2 472 71.2
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 1.6e-190 669.8 471 70.9
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 2.8e-190 669.1 442 74.2
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 2.8e-190 669.1 475 69.9
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 6.2e-190 667.9 462 71.2
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 1.8e-189 666.4 478 69.2
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 2.6e-188 662.5 479 69.1
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 5.8e-188 661.4 467 69.8
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 1.3e-187 660.2 478 68.6
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 2.2e-187 659.4 470 69.8
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 1.1e-186 657.1 475 68.6
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 7.9e-185 651.0 445 70.6
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 1.8e-184 649.8 441 71.2
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 7.4e-183 644.4 455 69.5
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 2.1e-182 642.9 401 78.1
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 9.0e-181 637.5 505 65.3
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 9.0e-181 637.5 404 76.0
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 9.3e-178 627.5 400 75.8
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 1.2e-177 627.1 402 74.4
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 1.2e-177 627.1 408 73.8
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 1.6e-177 626.7 462 68.2
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 1.6e-177 626.7 403 75.9
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 6.0e-177 624.8 502 64.1
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 1.0e-176 624.0 403 73.2
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 5.1e-176 621.7 468 67.1
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 1.8e-173 613.2 470 66.0
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 9.0e-173 610.9 444 69.6
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 5.9e-172 608.2 457 67.8
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 2.5e-167 592.8 460 64.8
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 1.3e-166 590.5 361 79.5
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 5.9e-164 581.6 445 66.7
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 1.2e-161 573.9 426 66.9
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 4.7e-161 572.0 448 63.4
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 4.7e-161 572.0 430 67.2
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 8.8e-160 567.8 444 64.9
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 7.7e-156 554.7 375 71.5
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 2.9e-155 552.7 497 58.8
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 3.2e-154 549.3 461 62.3
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 9.4e-154 547.7 446 59.9
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 3.9e-152 542.3 443 59.4
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 3.8e-147 525.8 328 74.7
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 1.5e-143 513.8 335 74.3
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 1.5e-130 470.7 464 53.7
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 5.7e-127 458.8 446 52.9
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 2.3e-112 410.2 497 46.1
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 3.4e-111 406.4 242 77.3
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 2.8e-105 386.7 246 74.4
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 5.2e-96 355.9 461 44.5
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 1.7e-91 340.9 332 55.7
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 6.6e-91 339.0 332 55.7
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 2.4e-88 330.5 200 76.5
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 5.3e-88 329.3 262 60.7
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 2.8e-81 307.0 226 69.9
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 2.4e-72 277.3 211 65.9
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.3e-67 260.8 179 69.8
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 9.0e-64 248.8 314 49.4
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 3.0e-59 233.8 477 36.5
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 4.5e-55 219.9 165 64.8
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 5.0e-38 163.3 109 68.8
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 1.8e-35 154.8 93 79.6
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 6.5e-30 136.3 111 64.0
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 1.7e-25 121.7 111 58.6
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 2.5e-13 81.3 86 48.8
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 9.8e-10 69.3 100 41.0
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 3.2e-08 64.3 64 56.2


User provided reference genes

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