Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 3.0e-117 425.2 225 100.0
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 8.3e-83 310.8 226 77.0
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 1.7e-80 303.1 225 74.7
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.6e-78 296.6 226 74.3
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 3.6e-78 295.4 226 73.9
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 2.0e-76 289.7 231 72.3
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 3.4e-76 288.9 221 74.7
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.7e-75 286.6 221 74.2
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.6e-73 280.0 219 72.6
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 3.0e-72 275.8 225 69.3
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 3.9e-72 275.4 225 68.0
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 5.1e-72 275.0 221 71.0
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 6.6e-72 274.6 172 83.7
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 8.6e-72 274.2 169 87.0
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.5e-71 273.5 226 69.9
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 1.9e-71 273.1 225 68.4
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 4.3e-71 271.9 228 69.3
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 5.6e-71 271.6 236 68.2
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 7.3e-71 271.2 225 70.2
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 7.3e-71 271.2 231 67.1
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.2e-70 270.4 225 68.9
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 1.2e-70 270.4 235 67.2
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 1.6e-70 270.0 211 70.1
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.6e-70 270.0 231 68.4
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 2.1e-70 269.6 223 69.1
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.8e-70 269.2 226 69.5
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 3.6e-70 268.9 230 68.3
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 3.6e-70 268.9 225 70.7
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 4.7e-70 268.5 226 69.5
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.1e-69 267.3 226 69.9
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.1e-69 267.3 225 68.4
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 3.1e-69 265.8 212 72.6
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 3.1e-69 265.8 226 68.1
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 5.2e-69 265.0 225 68.9
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 8.9e-69 264.2 235 67.2
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 8.9e-69 264.2 237 67.5
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 2.6e-68 262.7 212 71.7
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 2.6e-68 262.7 167 85.0
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 3.4e-68 262.3 226 68.1
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 9.9e-68 260.8 231 67.1
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 9.9e-68 260.8 233 64.8
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 2.2e-67 259.6 210 71.0
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 2.9e-67 259.2 212 71.2
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 3.8e-67 258.8 209 71.3
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 1.1e-66 257.3 226 66.4
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 1.1e-66 257.3 248 62.1
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 2.4e-66 256.1 210 70.0
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.2e-66 255.8 167 82.0
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 1.6e-65 253.4 230 64.8
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 2.1e-65 253.1 216 70.4
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 2.1e-65 253.1 232 65.9
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.3e-64 250.4 224 66.1
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.3e-64 250.4 224 66.1
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 1.7e-64 250.0 216 69.9
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 3.0e-64 249.2 204 70.6
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 6.6e-64 248.1 185 75.7
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 8.7e-64 247.7 204 69.6
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 3.3e-63 245.7 171 77.8
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 9.6e-63 244.2 217 67.3
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 9.6e-63 244.2 171 78.9
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 9.6e-63 244.2 215 63.7
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 1.6e-62 243.4 189 70.4
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 2.1e-62 243.0 213 68.5
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 1.1e-61 240.7 257 58.8
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.4e-61 240.4 172 73.3
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 2.4e-61 239.6 187 70.6
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 5.3e-61 238.4 224 60.3
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 5.3e-61 238.4 159 83.0
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 6.9e-61 238.0 171 77.8
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 9.0e-61 237.7 169 78.7
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 3.4e-60 235.7 171 77.2
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 3.4e-60 235.7 201 68.2
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 5.8e-60 235.0 215 63.7
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 1.3e-59 233.8 170 76.5
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 2.9e-59 232.6 167 78.4
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 2.9e-59 232.6 175 74.9
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 6.4e-59 231.5 173 71.7
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 8.4e-59 231.1 235 58.3
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 1.1e-58 230.7 209 64.6
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 5.4e-58 228.4 232 60.8
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 7.1e-58 228.0 208 65.4
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 7.1e-58 228.0 229 58.1
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 1.2e-57 227.3 186 69.4
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 3.5e-57 225.7 217 59.4
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 4.6e-57 225.3 199 63.8
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 7.9e-57 224.6 220 61.8
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 2.3e-56 223.0 176 71.0
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 3.9e-56 222.2 127 90.6
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 1.1e-55 220.7 203 65.0
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 2.5e-55 219.5 172 69.8
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 3.3e-55 219.2 182 67.6
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.6e-54 216.9 149 81.9
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 4.8e-54 215.3 149 79.2
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 2.4e-53 213.0 164 75.6
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 5.3e-53 211.8 173 67.6
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 6.9e-53 211.5 182 68.1
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 4.5e-52 208.8 125 84.8
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 2.9e-51 206.1 191 64.9
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 2.4e-50 203.0 159 76.1
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 4.2e-50 202.2 167 65.3
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 5.5e-50 201.8 122 86.9
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 5.5e-50 201.8 122 86.9
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 1.0e-48 197.6 327 45.6
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 1.1e-47 194.1 160 67.5
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 1.4e-45 187.2 176 58.0
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 1.7e-43 180.3 164 60.4
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 1.9e-42 176.8 151 58.9
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 2.7e-41 172.9 149 62.4
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 4.6e-41 172.2 151 58.9
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 2.0e-36 156.8 108 76.9
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.4e-34 150.6 167 55.7
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 2.1e-33 146.7 174 48.3
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 2.2e-30 136.7 98 71.4
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 2.6e-28 129.8 120 61.7
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 1.4e-26 124.0 98 63.3
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.2e-25 120.9 141 48.2
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 7.4e-23 111.7 139 43.9
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 9.7e-23 111.3 73 79.5
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 3.7e-22 109.4 90 67.8
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 1.3e-19 100.9 71 80.3
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 3.8e-19 99.4 147 44.9


User provided reference genes

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