Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc15.83 Carica papaya HOM05D004524 ORTHO05D005477 2.6e-115 418.7 210 100.0
Dinv26770 Davidia involucrata HOM05D004524 ORTHO05D005477 1.6e-40 170.2 187 51.3
Prupe.7G144700 Prunus persica HOM05D004524 ORTHO05D005477 2.8e-40 169.5 176 51.7
Manes.13G131650 Manihot esculenta HOM05D004524 ORTHO05D005477 1.2e-38 164.1 172 49.4
Gorai.007G208400 Gossypium raimondii HOM05D004524 ORTHO05D005477 2.0e-38 163.3 180 48.3
Ciclev10024678m.g Citrus clementina HOM05D004524 ORTHO05D005477 3.4e-38 162.5 189 46.6
Atru.chr3.464 Acer truncatum HOM05D004524 ORTHO05D005477 1.0e-37 161.0 190 49.5
Potri.007G034900 Populus trichocarpa HOM05D004524 ORTHO05D005477 1.0e-37 161.0 178 51.1
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 1.3e-37 160.6 180 50.6
Duzib187G1201 Durio zibethinus HOM05D004524 ORTHO05D005477 1.4e-36 157.1 180 47.8
CiPaw.01G027900 Carya illinoinensis HOM05D004524 ORTHO05D005477 7.1e-36 154.8 179 48.0
Haze_15174 Corylus avellana HOM05D004524 ORTHO05D005477 1.0e-34 151.0 178 46.1
Cfa004228 Carpinus fangiana HOM05D004524 ORTHO05D005477 3.9e-34 149.1 178 45.5
MD02G1159300 Malus domestica HOM05D004524 ORTHO05D005477 8.7e-34 147.9 187 43.3
Medtr8g078970 Medicago truncatula HOM05D004524 ORTHO05D005477 1.1e-33 147.5 184 43.5
CANSAT01G1357 Cannabis sativa HOM05D004524 ORTHO05D005477 1.9e-33 146.7 178 43.8
Lsat_1_v5_gn_3_94181 Lactuca sativa HOM05D004524 ORTHO05D005477 3.3e-33 146.0 177 48.0
Sabra07G0030300 Salix brachista HOM05D004524 ORTHO05D005477 4.3e-33 145.6 177 45.2
THA.LOC104827123 Tarenaya hassleriana HOM05D004524 ORTHO05D005477 7.4e-33 144.8 177 40.1
TWI53G1766 Tripterygium wilfordii HOM05D004524 ORTHO05D005477 4.8e-32 142.1 183 44.3
AL5G30510 Arabidopsis lyrata HOM05D004524 ORTHO05D005477 1.4e-31 140.6 159 47.8
FAN19G0876 Fragaria x ananassa HOM05D004524 ORTHO05D005477 1.8e-31 140.2 172 44.8
Aqoxy5G01755 Aquilegia oxysepala HOM05D004524 ORTHO05D005477 3.1e-31 139.4 177 41.2
FvH4_1g14580 Fragaria vesca HOM05D004524 ORTHO05D005477 3.1e-31 139.4 172 44.8
FAN26G3430 Fragaria x ananassa HOM05D004524 ORTHO05D005477 3.1e-31 139.4 172 44.8
RcHm_v2.0_Chr2g0103341 Rosa chinensis HOM05D004524 ORTHO05D005477 3.1e-31 139.4 173 46.8
Lj4g0019712 Lotus japonicus HOM05D004524 ORTHO05D005477 4.1e-31 139.0 188 39.9
Aa31LG4G18620 Aethionema arabicum HOM05D004524 ORTHO05D005477 5.3e-31 138.7 158 43.7
FAN23G1697 Fragaria x ananassa HOM05D004524 ORTHO05D005477 6.9e-31 138.3 172 44.8
Ca_22222_v3 Cicer arietinum L. HOM05D004524 ORTHO05D005477 2.0e-30 136.7 190 38.9
arahy.Tifrunner.gnm1.ann1.Z7Z8T5 Arachis hypogaea HOM05D004524 ORTHO05D005477 4.5e-30 135.6 184 39.7
BcaB05g23215 Brassica carinata HOM05D004524 ORTHO05D005477 4.5e-30 135.6 177 42.4
A01p24160 Brassica napus HOM05D004524 ORTHO05D005477 7.6e-30 134.8 158 43.0
BraA01t02328Z Brassica rapa HOM05D004524 ORTHO05D005477 7.6e-30 134.8 158 43.0
CARHR159890 Cardamine hirsuta HOM05D004524 ORTHO05D005477 1.0e-29 134.4 160 46.2
BcaC09g50025 Brassica carinata HOM05D004524 ORTHO05D005477 2.2e-29 133.3 177 41.2
BolC1t02927H Brassica oleracea HOM05D004524 ORTHO05D005477 2.2e-29 133.3 177 41.2
Carub.0005s1670 Capsella rubella HOM05D004524 ORTHO05D005477 2.2e-29 133.3 159 44.7
Hma1.2p1_0261F.1_g105050 Hydrangea macrophylla HOM05D004524 ORTHO05D005477 2.2e-29 133.3 178 41.6
Thhalv10027614m.g Eutrema salsugineum HOM05D004524 ORTHO05D005477 2.9e-29 132.9 158 43.0
arahy.Tifrunner.gnm1.ann1.7NUW0V Arachis hypogaea HOM05D004524 ORTHO05D005477 5.0e-29 132.1 184 39.1
Lj7A15G50 Lonicera japonica HOM05D004524 ORTHO05D005477 8.4e-29 131.3 177 45.2
TAR628G0958 Trochodendron aralioides HOM05D004524 ORTHO05D005477 1.4e-28 130.6 160 41.2
PSO170G3447 Papaver somniferum HOM05D004524 ORTHO05D005477 3.2e-28 129.4 171 41.5
Eucgr.H01946 Eucalyptus grandis HOM05D004524 ORTHO05D005477 4.2e-28 129.0 178 39.3
Lalb_Chr05g0226951 Lupinus albus HOM05D004524 ORTHO05D005477 1.2e-27 127.5 179 38.0
Oeu032928.5 Olea europaea HOM05D004524 ORTHO05D005477 1.2e-27 127.5 178 41.6
Glyma.16G144200 Glycine max HOM05D004524 ORTHO05D005477 2.7e-27 126.3 188 37.8
Psat0s4301g0040 Pisum sativum HOM05D004524 ORTHO05D005477 2.7e-27 126.3 188 37.2
PSO700G0043 Papaver somniferum HOM05D004524 ORTHO05D005477 4.6e-27 125.6 171 40.9
PGR102G0585 Punica granatum HOM05D004524 ORTHO05D005477 4.6e-27 125.6 177 37.9
Sopen02g034830 Solanum pennellii HOM05D004524 ORTHO05D005477 4.6e-27 125.6 182 37.9
Nn5g29420 Nelumbo nucifera HOM05D004524 ORTHO05D005477 1.0e-26 124.4 178 41.0
Sp5g11790 Schrenkiella parvula HOM05D004524 ORTHO05D005477 1.0e-26 124.4 159 40.9
PGSC0003DMG400010031 Solanum tuberosum HOM05D004524 ORTHO05D005477 2.3e-26 123.2 182 38.5
Nitab4.5_0001014g0150 Nicotiana tabacum HOM05D004524 ORTHO05D005477 8.7e-26 121.3 184 38.6
Gohir.A11G188400 Gossypium hirsutum HOM05D004524 ORTHO05D005477 1.9e-25 120.2 177 40.1
EL10Ac6g14835 Beta vulgaris HOM05D004524 ORTHO05D005477 2.5e-25 119.8 171 38.0
CAN.G836.24 Capsicum annuum HOM05D004524 ORTHO05D005477 4.3e-25 119.0 182 36.3
Nitab4.5_0000108g0190 Nicotiana tabacum HOM05D004524 ORTHO05D005477 7.4e-25 118.2 182 38.5
unitig_62.g23407 Utricularia gibba HOM05D004524 ORTHO05D005477 2.8e-24 116.3 178 37.1
MBI16_g31331_MAGBIO Magnolia biondii HOM05D004524 ORTHO05D005477 3.7e-24 115.9 178 37.6
Peaxi162Scf00535g00736 Petunia axillaris HOM05D004524 ORTHO05D005477 6.3e-24 115.2 182 37.4
SalBow1G7798 Salvia bowleyana HOM05D004524 ORTHO05D005477 1.1e-23 114.4 167 36.5
ClCG01G016470 Citrullus lanatus HOM05D004524 ORTHO05D005477 1.8e-23 113.6 183 38.3
Hund14111 Selenicereus undatus HOM05D004524 ORTHO05D005477 5.3e-23 112.1 193 34.7
Rhsim08G0108900 Rhododendron simsii HOM05D004524 ORTHO05D005477 9.0e-23 111.3 179 38.0
SGA_v2.0_scaffold15G07211 Striga asiatica HOM05D004524 ORTHO05D005477 1.5e-22 110.5 166 34.9
CsaV3_6G042750 Cucumis sativus L. HOM05D004524 ORTHO05D005477 2.0e-22 110.2 182 38.5
HanXRQChr12g0378491 Helianthus annuus HOM05D004524 ORTHO05D005477 2.0e-22 110.2 173 38.7
Migut.H00497 Erythranthe guttata HOM05D004524 ORTHO05D005477 5.9e-22 108.6 178 34.8
ECA246G4564 Erigeron canadensis HOM05D004524 ORTHO05D005477 7.7e-22 108.2 171 39.8
Phvul.003G249100 Phaseolus vulgaris HOM05D004524 ORTHO05D005477 7.7e-22 108.2 178 36.0
MSTRG.23802 Avicennia marina HOM05D004524 ORTHO05D005477 2.2e-21 106.7 178 33.1
DCAR_025673 Daucus carota HOM05D004524 ORTHO05D005477 2.9e-21 106.3 173 39.9
Cc07_g05430 Coffea canephora HOM05D004524 ORTHO05D005477 3.8e-21 105.9 173 38.2
AUR62003242 Chenopodium quinoa HOM05D004524 ORTHO05D005477 1.9e-20 103.6 173 33.5
Sed0025355 Sechium edule HOM05D004524 ORTHO05D005477 1.9e-20 103.6 185 35.7
Sc16g0001530 Simmondsia chinensis HOM05D004524 ORTHO05D005477 3.2e-20 102.8 160 36.2
MELO3C007516.2 Cucumis melo HOM05D004524 ORTHO05D005477 6.1e-19 98.6 182 35.2
COL.COLO4_22188 Corchorus olitorius HOM05D004524 ORTHO05D005477 7.9e-19 98.2 114 44.7
ATR0733G201 Amborella trichopoda HOM05D004524 ORTHO05D005477 4.3e-17 92.4 162 34.6
vmacro17890 Vaccinium macrocarpon HOM05D004524 ORTHO05D005477 1.3e-16 90.9 198 33.8
HPP92_018739 Vanilla planifolia HOM05D004524 ORTHO05D005477 2.6e-14 83.2 129 34.1
SEGI_30472 Sequoiadendron giganteum HOM05D004524 ORTHO05D037600 5.0e-13 79.0 158 29.1
VMungo0720G0368 Vigna mungo HOM05D004524 ORTHO05D051592 2.3e-10 70.1 78 43.6
TPR.G11249 Trifolium pratense HOM05D004524 ORTHO05D005477 1.7e-08 63.9 80 37.5
arahy.Tifrunner.gnm1.ann1.Y36QTI Arachis hypogaea HOM05D004524 ORTHO05D005477 3.5e-06 56.2 77 35.1


User provided reference genes

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