Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc15.77 Carica papaya HOM05D004524 ORTHO05D005477 1.5e-225 785.8 394 100.0
Manes.13G131650 Manihot esculenta HOM05D004524 ORTHO05D005477 2.1e-89 333.6 434 44.0
Thecc.01G046200 Theobroma cacao HOM05D004524 ORTHO05D005477 7.0e-85 318.5 430 44.7
Atru.chr3.464 Acer truncatum HOM05D004524 ORTHO05D005477 1.3e-83 314.3 434 43.3
Gohir.A11G188400 Gossypium hirsutum HOM05D004524 ORTHO05D005477 2.9e-83 313.2 430 44.4
Potri.007G034900 Populus trichocarpa HOM05D004524 ORTHO05D005477 2.9e-83 313.2 431 43.9
Prupe.7G144700 Prunus persica HOM05D004524 ORTHO05D005477 5.0e-83 312.4 433 42.5
Cfa004228 Carpinus fangiana HOM05D004524 ORTHO05D005477 8.6e-83 311.6 431 45.0
Gohir.D11G194900 Gossypium hirsutum HOM05D004524 ORTHO05D005477 8.6e-83 311.6 430 44.2
Gorai.007G208400 Gossypium raimondii HOM05D004524 ORTHO05D005477 8.6e-83 311.6 430 44.2
Duzib187G1201 Durio zibethinus HOM05D004524 ORTHO05D005477 1.5e-82 310.8 431 44.3
FAN28G0821 Fragaria x ananassa HOM05D004524 ORTHO05D005477 5.5e-82 308.9 438 43.2
FvH4_1g14580 Fragaria vesca HOM05D004524 ORTHO05D005477 1.2e-81 307.8 433 43.2
CiPaw.01G027900 Carya illinoinensis HOM05D004524 ORTHO05D005477 2.8e-81 306.6 432 44.2
RcHm_v2.0_Chr2g0103341 Rosa chinensis HOM05D004524 ORTHO05D005477 1.0e-80 304.7 433 43.0
Glyma.16G144200 Glycine max HOM05D004524 ORTHO05D005477 1.4e-80 304.3 432 41.7
Haze_15172 Corylus avellana HOM05D004524 ORTHO05D005477 1.2e-79 301.2 429 44.1
MD02G1159300 Malus domestica HOM05D004524 ORTHO05D005477 1.5e-79 300.8 433 42.3
QL06p044160 Quercus lobata HOM05D004524 ORTHO05D005477 9.8e-79 298.1 433 43.2
VMungo0251G2856 Vigna mungo HOM05D004524 ORTHO05D005477 2.8e-78 296.6 430 40.7
Dinv26770 Davidia involucrata HOM05D004524 ORTHO05D005477 4.1e-77 292.7 442 41.9
Lalb_Chr05g0226951 Lupinus albus HOM05D004524 ORTHO05D005477 5.4e-77 292.4 429 40.6
TAR628G0958 Trochodendron aralioides HOM05D004524 ORTHO05D005477 5.4e-77 292.4 426 42.7
Lj4g0019712 Lotus japonicus HOM05D004524 ORTHO05D005477 9.2e-77 291.6 426 40.6
THA.LOC104827123 Tarenaya hassleriana HOM05D004524 ORTHO05D005477 1.6e-76 290.8 434 40.8
Sp5g11790 Schrenkiella parvula HOM05D004524 ORTHO05D005477 7.8e-76 288.5 431 41.1
TWI53G1766 Tripterygium wilfordii HOM05D004524 ORTHO05D005477 7.8e-76 288.5 432 41.2
FAN19G0876 Fragaria x ananassa HOM05D004524 ORTHO05D005477 1.3e-75 287.7 419 42.0
Ca_22222_v3 Cicer arietinum L. HOM05D004524 ORTHO05D005477 5.0e-75 285.8 425 40.7
Phvul.003G249100 Phaseolus vulgaris HOM05D004524 ORTHO05D005477 1.9e-74 283.9 430 39.5
AL5G30510 Arabidopsis lyrata HOM05D004524 ORTHO05D005477 2.5e-74 283.5 432 41.4
Carub.0005s1670 Capsella rubella HOM05D004524 ORTHO05D005477 1.2e-73 281.2 432 40.5
TPR.G11249 Trifolium pratense HOM05D004524 ORTHO05D005477 1.2e-73 281.2 419 40.1
GSVIVG01005092001 Vitis vinifera HOM05D004524 ORTHO05D005477 2.1e-73 280.4 442 41.0
AT3G50380 Arabidopsis thaliana HOM05D004524 ORTHO05D005477 3.6e-73 279.6 432 40.5
Eucgr.H01945 Eucalyptus grandis HOM05D004524 ORTHO05D005477 5.2e-72 275.8 427 38.4
Thhalv10027614m.g Eutrema salsugineum HOM05D004524 ORTHO05D005477 8.9e-72 275.0 431 39.9
BcaB05g23215 Brassica carinata HOM05D004524 ORTHO05D005477 1.2e-71 274.6 431 39.7
Ciclev10024678m.g Citrus clementina HOM05D004524 ORTHO05D005477 1.5e-71 274.2 434 39.2
Aa31LG4G18620 Aethionema arabicum HOM05D004524 ORTHO05D005477 2.0e-71 273.9 431 39.9
Sabra07G0030300 Salix brachista HOM05D004524 ORTHO05D005477 4.4e-71 272.7 448 39.1
A01p24160 Brassica napus HOM05D004524 ORTHO05D005477 5.8e-71 272.3 431 39.4
BraA01t02328Z Brassica rapa HOM05D004524 ORTHO05D005477 5.8e-71 272.3 431 39.4
Medtr8g078970 Medicago truncatula HOM05D004524 ORTHO05D005477 5.8e-71 272.3 424 38.2
BcaC09g50025 Brassica carinata HOM05D004524 ORTHO05D005477 7.5e-71 271.9 431 39.4
arahy.Tifrunner.gnm1.ann1.S59764 Arachis hypogaea HOM05D004524 ORTHO05D005477 9.8e-71 271.6 430 39.5
C01p29870 Brassica napus HOM05D004524 ORTHO05D005477 1.7e-70 270.8 431 39.4
BolC1t02927H Brassica oleracea HOM05D004524 ORTHO05D005477 1.7e-70 270.8 431 39.4
CANSAT01G1357 Cannabis sativa HOM05D004524 ORTHO05D005477 4.6e-68 262.7 433 38.6
Psat0s4220g0040 Pisum sativum HOM05D004524 ORTHO05D005477 4.6e-68 262.7 424 38.7
FAN23G1697 Fragaria x ananassa HOM05D004524 ORTHO05D005477 1.3e-67 261.2 475 36.8
Nitab4.5_0000108g0200 Nicotiana tabacum HOM05D004524 ORTHO05D005477 2.0e-63 247.3 447 35.8
Nn5g29420 Nelumbo nucifera HOM05D004524 ORTHO05D005477 2.6e-63 246.9 441 36.5
PGR102G0585 Punica granatum HOM05D004524 ORTHO05D005477 1.3e-62 244.6 429 36.1
Sc16g0001530 Simmondsia chinensis HOM05D004524 ORTHO05D005477 2.9e-62 243.4 439 37.8
vmacro17888 Vaccinium macrocarpon HOM05D004524 ORTHO05D005477 1.1e-61 241.5 383 40.2
Cc07_g05430 Coffea canephora HOM05D004524 ORTHO05D005477 3.2e-61 240.0 436 36.7
Sed0025355 Sechium edule HOM05D004524 ORTHO05D005477 4.1e-61 239.6 432 36.8
Aqoxy5G01755 Aquilegia oxysepala HOM05D004524 ORTHO05D005477 2.1e-60 237.3 439 36.7
HanXRQChr12g0378491 Helianthus annuus HOM05D004524 ORTHO05D005477 6.0e-60 235.7 435 36.6
CAN.G836.23 Capsicum annuum HOM05D004524 ORTHO05D005477 2.3e-59 233.8 444 35.1
ECA246G4564 Erigeron canadensis HOM05D004524 ORTHO05D005477 2.3e-59 233.8 436 36.2
arahy.Tifrunner.gnm1.ann1.7NUW0V Arachis hypogaea HOM05D004524 ORTHO05D005477 3.9e-59 233.0 430 37.0
Lsat_1_v5_gn_3_94181 Lactuca sativa HOM05D004524 ORTHO05D005477 8.6e-59 231.9 439 35.5
PSO170G3447 Papaver somniferum HOM05D004524 ORTHO05D005477 3.3e-58 229.9 439 35.8
DCAR_025673 Daucus carota HOM05D004524 ORTHO05D005477 9.5e-58 228.4 437 34.6
MSTRG.23802 Avicennia marina HOM05D004524 ORTHO05D005477 2.8e-57 226.9 441 35.1
Rhsim08G0108900 Rhododendron simsii HOM05D004524 ORTHO05D005477 2.8e-57 226.9 527 32.3
MELO3C007516.2 Cucumis melo HOM05D004524 ORTHO05D005477 6.2e-57 225.7 436 36.2
Sopen02g034830 Solanum pennellii HOM05D004524 ORTHO05D005477 6.2e-57 225.7 441 34.5
CsaV3_6G042750 Cucumis sativus L. HOM05D004524 ORTHO05D005477 8.1e-57 225.3 427 35.8
FAN26G3430 Fragaria x ananassa HOM05D004524 ORTHO05D005477 2.3e-56 223.8 415 35.7
Migut.H00497 Erythranthe guttata HOM05D004524 ORTHO05D005477 2.2e-54 217.2 437 35.0
SalBow1G7798 Salvia bowleyana HOM05D004524 ORTHO05D005477 3.5e-52 209.9 444 33.6
Nitab4.5_0001014g0170 Nicotiana tabacum HOM05D004524 ORTHO05D005477 1.7e-51 207.6 378 36.8
ATR0733G201 Amborella trichopoda HOM05D004524 ORTHO05D005477 5.1e-51 206.1 441 33.1
Hund14111 Selenicereus undatus HOM05D004524 ORTHO05D005477 6.6e-51 205.7 442 31.2
CARHR159880 Cardamine hirsuta HOM05D004524 ORTHO05D005477 7.3e-50 202.2 406 36.0
Peaxi162Scf00535g00735 Petunia axillaris HOM05D004524 ORTHO05D005477 2.4e-48 197.2 378 36.8
SGA_v2.0_scaffold15G07211 Striga asiatica HOM05D004524 ORTHO05D005477 8.9e-48 195.3 383 33.4
AUR62027230 Chenopodium quinoa HOM05D004524 ORTHO05D005477 2.0e-47 194.1 441 30.4
HPP92_018815 Vanilla planifolia HOM05D004524 ORTHO05D005477 1.7e-46 191.0 442 31.0
AUR62003242 Chenopodium quinoa HOM05D004524 ORTHO05D005477 1.4e-45 188.0 444 30.2
EL10Ac6g14835 Beta vulgaris HOM05D004524 ORTHO05D005477 2.4e-45 187.2 440 28.0
Solyc02g090130.4 Solanum lycopersicum HOM05D004524 ORTHO05D005477 3.2e-45 186.8 373 36.7
ClCG01G016470 Citrullus lanatus HOM05D004524 ORTHO05D005477 9.2e-45 185.3 257 43.2
CDE01G0297 Ceratophyllum demersum HOM05D004524 ORTHO05D005477 2.7e-44 183.7 462 30.3
PSO700G0043 Papaver somniferum HOM05D004524 ORTHO05D005477 3.0e-43 180.3 266 41.4
Zm00001eb030660 Zea mays HOM05D004524 ORTHO05D005477 6.2e-41 172.6 456 29.4
Ah.02g126100 Amaranthus hybridus HOM05D004524 ORTHO05D005477 6.9e-40 169.1 444 29.1
COL.COLO4_22188 Corchorus olitorius HOM05D004524 ORTHO05D005477 3.4e-31 140.2 116 61.2
SEGI_08749 Sequoiadendron giganteum HOM05D004524 ORTHO05D005477 4.8e-25 119.8 416 26.2
MBI16_g31331_MAGBIO Magnolia biondii HOM05D004524 ORTHO05D005477 3.8e-22 110.2 145 41.4
unitig_62.g23407 Utricularia gibba HOM05D004524 ORTHO05D005477 4.9e-22 109.8 408 26.5
MBI16_g31332_MAGBIO Magnolia biondii HOM05D004524 ORTHO05D005477 3.2e-21 107.1 114 49.1
AagrBONN_evm.TU.Sc2ySwM_344.2829 Anthoceros agrestis HOM05D004524 ORTHO05D005477 2.5e-18 97.4 394 24.4
Mapoly0053s0053 Marchantia polymorpha HOM05D004524 ORTHO05D005477 3.7e-17 93.6 412 26.0
ClCG01G016450 Citrullus lanatus HOM05D004524 ORTHO05D005477 1.2e-15 88.6 106 45.3
Pp3c8_13080 Physcomitrium patens HOM05D004524 ORTHO05D005477 9.3e-13 79.0 410 22.0
Actinidia30986 Actinidia chinensis HOM05D004524 ORTHO05D005477 8.2e-09 65.9 57 50.9


User provided reference genes

Program Settings