Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 1.3e-58 229.9 155 100.0
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 7.1e-25 117.9 169 62.1
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 2.7e-24 115.9 169 61.5
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 3.9e-23 112.1 154 61.0
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 6.7e-23 111.3 162 62.3
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 2.5e-22 109.4 168 56.5
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 4.3e-22 108.6 136 62.5
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 2.8e-21 105.9 153 63.4
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 2.8e-21 105.9 167 57.5
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.7e-21 105.5 151 57.0
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 4.8e-21 105.1 168 56.0
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 6.2e-21 104.8 162 59.9
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 6.2e-21 104.8 162 59.9
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.1e-20 104.0 151 58.3
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 1.1e-20 104.0 172 59.9
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 2.4e-20 102.8 152 59.2
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 3.1e-20 102.4 141 63.8
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 4.0e-20 102.1 162 59.3
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 5.3e-20 101.7 162 58.6
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 5.3e-20 101.7 170 57.6
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 6.9e-20 101.3 152 61.2
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 6.9e-20 101.3 154 57.1
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 9.0e-20 100.9 130 56.9
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 9.0e-20 100.9 168 55.4
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 9.0e-20 100.9 142 63.4
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 1.5e-19 100.1 159 57.9
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.5e-19 100.1 125 68.8
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 2.0e-19 99.8 168 54.8
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 5.8e-19 98.2 110 76.4
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 7.6e-19 97.8 152 61.8
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 7.6e-19 97.8 152 59.9
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.0e-18 97.4 142 58.5
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.3e-18 97.1 158 58.2
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.3e-18 97.1 158 58.2
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 1.3e-18 97.1 168 51.8
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.3e-18 97.1 164 59.1
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 6.5e-18 94.7 166 57.2
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 6.5e-18 94.7 149 61.7
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 6.5e-18 94.7 142 59.9
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 8.4e-18 94.4 166 57.2
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 1.9e-17 93.2 165 57.6
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 2.5e-17 92.8 162 57.4
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 3.2e-17 92.4 157 57.3
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 5.5e-17 91.7 169 56.2
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 5.5e-17 91.7 163 57.1
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 9.3e-17 90.9 125 63.2
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 9.3e-17 90.9 169 54.4
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.6e-16 90.1 158 54.4
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 4.6e-16 88.6 121 64.5
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 4.6e-16 88.6 158 54.4
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 4.6e-16 88.6 162 58.6
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 6.1e-16 88.2 169 53.8
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 7.9e-16 87.8 122 66.4
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 1.3e-15 87.0 129 58.1
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 1.3e-15 87.0 129 58.1
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 1.8e-15 86.7 161 52.2
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 2.3e-15 86.3 161 55.9
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 5.1e-15 85.1 130 56.2
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 6.7e-15 84.7 151 59.6
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 8.7e-15 84.3 165 54.5
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 1.1e-14 84.0 156 59.0
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 5.7e-14 81.6 149 57.0
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 5.7e-14 81.6 157 53.5
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 5.7e-14 81.6 166 52.4
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 9.7e-14 80.9 160 47.5
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 9.7e-14 80.9 164 51.8
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 1.3e-13 80.5 162 50.6
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.6e-13 80.1 177 50.8
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 2.2e-13 79.7 149 57.7
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 3.7e-13 79.0 170 52.9
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 3.7e-13 79.0 149 56.4
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 4.8e-13 78.6 142 57.7
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 6.3e-13 78.2 166 51.8
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 8.2e-13 77.8 170 50.6
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 8.2e-13 77.8 152 55.9
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 8.2e-13 77.8 120 58.3
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 1.1e-12 77.4 170 49.4
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 2.4e-12 76.3 144 56.2
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 3.1e-12 75.9 151 55.0
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 3.1e-12 75.9 172 50.0
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 6.9e-12 74.7 126 61.1
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 9.0e-12 74.3 206 44.7
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 9.0e-12 74.3 156 52.6
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 2.6e-11 72.8 121 61.2
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 7.7e-11 71.2 109 45.0
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 1.3e-10 70.5 128 58.6
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 2.2e-10 69.7 166 50.6
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 3.8e-10 68.9 104 64.4
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 1.1e-09 67.4 162 42.6
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 5.5e-09 65.1 118 60.2
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 7.2e-09 64.7 161 54.7
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 7.2e-09 64.7 161 54.0
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 9.4e-09 64.3 161 54.0
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 1.2e-08 63.9 156 47.4
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.2e-08 63.9 93 69.9
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.1e-08 61.6 168 51.8
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 3.9e-07 58.9 166 47.0
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 2.0e-06 56.6 142 42.3


User provided reference genes

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