Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc15.22 Carica papaya HOM05D005847 ORTHO05D007143 6.9e-65 250.4 116 100.0
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 6.3e-34 147.5 81 85.2
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 6.3e-34 147.5 81 85.2
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 1.1e-33 146.7 81 85.2
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 2.4e-33 145.6 81 84.0
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 3.1e-33 145.2 81 84.0
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 5.3e-33 144.4 82 84.1
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 7.0e-33 144.1 81 82.7
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 7.0e-33 144.1 84 79.8
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 1.5e-32 142.9 81 81.5
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 1.5e-32 142.9 82 81.7
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 1.5e-32 142.9 84 77.4
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 2.6e-32 142.1 81 81.5
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 4.5e-32 141.4 82 79.3
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 7.7e-32 140.6 82 79.3
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 7.7e-32 140.6 82 79.3
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 7.7e-32 140.6 84 77.4
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 1.3e-31 139.8 82 78.0
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 1.7e-31 139.4 80 80.0
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 1.7e-31 139.4 84 77.4
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 2.2e-31 139.0 82 78.0
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 2.2e-31 139.0 82 76.8
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 2.9e-31 138.7 82 76.8
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 3.8e-31 138.3 82 75.6
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 5.0e-31 137.9 82 78.0
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 6.5e-31 137.5 82 75.6
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 8.5e-31 137.1 80 78.8
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 8.5e-31 137.1 80 78.8
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 8.5e-31 137.1 80 78.8
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 8.5e-31 137.1 80 78.8
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 8.5e-31 137.1 80 78.8
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 1.1e-30 136.7 82 76.8
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 1.5e-30 136.3 84 75.0
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 1.5e-30 136.3 82 78.0
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 1.5e-30 136.3 82 75.6
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 1.9e-30 136.0 84 75.0
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 5.5e-30 134.4 82 74.4
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 7.2e-30 134.0 82 73.2
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 7.2e-30 134.0 82 76.8
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 9.4e-30 133.7 82 74.4
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 2.1e-29 132.5 82 75.6
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 2.7e-29 132.1 82 73.2
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 2.7e-29 132.1 82 75.6
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 2.7e-29 132.1 82 75.6
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 3.6e-29 131.7 87 73.6
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 3.6e-29 131.7 82 74.4
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 6.1e-29 131.0 82 74.4
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 6.1e-29 131.0 83 72.3
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 6.1e-29 131.0 82 74.4
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 6.1e-29 131.0 82 74.4
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 8.0e-29 130.6 82 73.2
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 8.0e-29 130.6 82 73.2
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 8.0e-29 130.6 82 75.6
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 8.0e-29 130.6 82 75.6
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 1.0e-28 130.2 82 73.2
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 1.4e-28 129.8 82 75.6
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 1.8e-28 129.4 78 74.4
MSTRG.15574 Avicennia marina HOM05D005847 ORTHO05D007143 2.3e-28 129.0 82 72.0
Lsat_1_v5_gn_6_83620 Lactuca sativa HOM05D005847 ORTHO05D007143 2.3e-28 129.0 82 74.4
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 2.3e-28 129.0 82 73.2
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 3.0e-28 128.6 82 74.4
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 5.2e-28 127.9 77 74.0
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 5.2e-28 127.9 82 74.4
Nitab4.5_0006880g0020 Nicotiana tabacum HOM05D005847 ORTHO05D007143 6.7e-28 127.5 82 72.0
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 8.8e-28 127.1 83 74.7
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 1.1e-27 126.7 83 73.5
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.1e-27 126.7 83 73.5
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.1e-27 126.7 83 73.5
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 1.5e-27 126.3 83 73.5
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 2.0e-27 125.9 82 76.8
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 2.0e-27 125.9 83 73.5
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 2.0e-27 125.9 83 73.5
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 2.0e-27 125.9 79 74.7
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 2.6e-27 125.6 82 69.5
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 3.3e-27 125.2 83 75.9
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 4.4e-27 124.8 82 72.0
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 5.7e-27 124.4 82 72.0
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 1.3e-26 123.2 82 70.7
Ah.12g052990 Amaranthus hybridus HOM05D005847 ORTHO05D007143 1.7e-26 122.9 84 65.5
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 1.7e-26 122.9 83 72.3
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 2.2e-26 122.5 90 64.4
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 2.8e-26 122.1 88 68.2
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 3.7e-26 121.7 89 64.0
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 6.3e-26 120.9 85 67.1
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 6.3e-26 120.9 85 68.2
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 6.3e-26 120.9 85 68.2
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 1.4e-25 119.8 87 66.7
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 2.4e-25 119.0 82 68.3
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 3.1e-25 118.6 82 67.1
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 7.0e-25 117.5 83 69.9
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 1.6e-24 116.3 87 67.8
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 2.0e-24 115.9 85 65.9
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 4.5e-24 114.8 82 68.3
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 1.3e-18 96.7 83 51.8
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis HOM05D005847 ORTHO05D007143 1.7e-18 96.3 95 51.6
CARHR046320 Cardamine hirsuta HOM05D005847 ORTHO05D007143 4.1e-17 91.7 62 66.1
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 4.1e-17 91.7 53 69.8
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 7.7e-16 87.4 58 65.5
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 1.3e-15 86.7 96 45.8
RcHm_v2.0_Chr7g0186431 Rosa chinensis HOM05D005847 ORTHO05D007143 1.3e-15 86.7 53 73.6
RcHm_v2.0_Chr7g0205571 Rosa chinensis HOM05D005847 ORTHO05D007143 4.7e-13 78.2 71 57.7
SMO115G0010 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 3.7e-10 68.6 82 41.5
RcHm_v2.0_Chr7g0205551 Rosa chinensis HOM05D005847 ORTHO05D007143 1.8e-09 66.2 40 70.0
QL10p010267 Quercus lobata HOM05D005847 ORTHO05D007143 2.4e-09 65.9 32 81.2
SMO119G0297 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 1.3e-07 60.1 39 59.0
MCO09G139 Micromonas commoda HOM05D005847 ORTHO05D007143 5.0e-07 58.2 77 41.6
Cre05.g237600 Chlamydomonas reinhardtii HOM05D005847 ORTHO05D007143 1.5e-06 56.6 84 40.5


User provided reference genes

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