Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc15.21 Carica papaya HOM05D000003 ORTHO05D000004 8.5e-72 273.5 129 100.0
Cpa.g.sc17.180 Carica papaya HOM05D000003 ORTHO05D000004 1.5e-12 76.6 50 62.0
Sopen08g017240 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-10 68.6 99 36.4
MBI17_g31747_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.2e-10 67.4 55 45.5
MBI09_g09410_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.2e-09 67.0 60 45.0
Sopen01g037960 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-09 67.0 125 33.6
QL08p057946 Quercus lobata HOM05D000269 ORTHO05D005780 1.6e-09 66.6 56 42.9
Aqoxy4G00279 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.0e-09 66.2 56 44.6
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.0e-09 66.2 56 44.6
Aqoxy3G01491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.5e-09 65.5 57 43.9
PSO478G1918 Papaver somniferum HOM05D000003 ORTHO05D000004 4.6e-09 65.1 103 31.1
Sopen04g035280 Solanum pennellii HOM05D000003 ORTHO05D000004 4.6e-09 65.1 55 49.1
MD06G1023000 Malus domestica HOM05D000003 ORTHO05D000004 6.0e-09 64.7 57 45.6
Oeu007456.1 Olea europaea HOM05D000003 ORTHO05D000006 6.0e-09 64.7 57 43.9
QL12p039879 Quercus lobata HOM05D000003 ORTHO05D000004 6.0e-09 64.7 57 45.6
RcHm_v2.0_Chr4g0393411 Rosa chinensis HOM05D000003 ORTHO05D000004 6.0e-09 64.7 57 43.9
Aqoxy7G01788 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.8e-09 64.3 57 43.9
QL12p033243 Quercus lobata HOM05D000329 ORTHO05D000833 7.8e-09 64.3 122 28.7
Oeu019417.3 Olea europaea HOM05D003461 ORTHO05D004386 1.0e-08 63.9 69 37.7
PSO566G0125 Papaver somniferum HOM05D000003 ORTHO05D000004 1.0e-08 63.9 68 36.8
PSO596G0036 Papaver somniferum HOM05D000003 ORTHO05D000004 1.0e-08 63.9 56 44.6
QL10p002852 Quercus lobata HOM05D000003 ORTHO05D000004 1.0e-08 63.9 119 30.3
Aqoxy1G02640 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-08 63.5 100 32.0
Aqoxy4G01058 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-08 63.5 57 42.1
MBI19_g24051_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.3e-08 63.5 60 43.3
Sopen11g018640 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-08 63.5 55 47.3
PSO675G5341 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-08 63.2 64 40.6
PSO782G3067 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-08 63.2 57 43.9
QL10p031139 Quercus lobata HOM05D000207 ORTHO05D001482 1.7e-08 63.2 56 42.9
Sopen06g002250 Solanum pennellii HOM05D000003 ORTHO05D000004 2.3e-08 62.8 57 45.6
Aqoxy1G03267 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.0e-08 62.4 57 42.1
Aqoxy2G01405 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.0e-08 62.4 57 40.4
Aqoxy2G01414 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.0e-08 62.4 57 40.4
Aqoxy3G02519 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.0e-08 62.4 56 44.6
MBI19_g17590_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.0e-08 62.4 55 43.6
PSO302G0219 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-08 62.4 57 45.6
PSO478G4317 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-08 62.4 56 42.9
PSO724G0774 Papaver somniferum HOM05D000003 ORTHO05D000004 3.0e-08 62.4 55 43.6
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 3.0e-08 62.4 55 41.8
PSO541G4429 Papaver somniferum HOM05D000003 ORTHO05D000004 3.9e-08 62.0 54 44.4
QL08p022680 Quercus lobata HOM05D000458 ORTHO05D004796 3.9e-08 62.0 122 29.5
Aqoxy1G03403 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.0e-08 61.6 57 42.1
Aqoxy2G00310 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.0e-08 61.6 57 40.4
Aqoxy2G02685 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.0e-08 61.6 57 42.1
Oeu044182.1 Olea europaea HOM05D000003 ORTHO05D000004 5.0e-08 61.6 57 43.9
PSO063G7028 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-08 61.6 56 42.9
PSO302G0073 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-08 61.6 57 36.8
Sopen07g025600 Solanum pennellii HOM05D000003 ORTHO05D000004 5.0e-08 61.6 99 35.4
MBI10_g16721_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 6.6e-08 61.2 60 41.7
Oeu038378.2 Olea europaea HOM05D000003 ORTHO05D001174 6.6e-08 61.2 57 42.1
PSO541G0105 Papaver somniferum HOM05D000003 ORTHO05D000004 6.6e-08 61.2 56 44.6
QL02p088183 Quercus lobata HOM05D004630 ORTHO05D005727 6.6e-08 61.2 56 41.1
QL10p005473 Quercus lobata HOM05D000230 ORTHO05D000176 6.6e-08 61.2 55 45.5
Sopen04g013750 Solanum pennellii HOM05D000003 ORTHO05D000004 6.6e-08 61.2 69 40.6
Aqoxy2G00968 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.6e-08 60.8 57 38.6
CSS0050470 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.6e-08 60.8 54 48.1
PSO339G6332 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-08 60.8 56 44.6
PSO478G4776 Papaver somniferum HOM05D000003 ORTHO05D000004 8.6e-08 60.8 56 41.1
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 8.6e-08 60.8 55 40.0
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 8.6e-08 60.8 55 40.0
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 8.6e-08 60.8 55 40.0
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 8.6e-08 60.8 55 40.0
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 8.6e-08 60.8 55 40.0
Aqoxy1G03439 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-07 60.5 57 38.6
PSO063G5867 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 60.5 57 45.6
PSO210G3134 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 60.5 56 41.1
PSO724G0020 Papaver somniferum HOM05D000003 ORTHO05D000004 1.1e-07 60.5 55 40.0
QL05p086823 Quercus lobata HOM05D000003 ORTHO05D000004 1.1e-07 60.5 55 45.5
Aqoxy1G02818 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-07 60.1 55 41.8
Aqoxy4G01286 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-07 60.1 57 42.1
PSO170G0745 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-07 60.1 56 42.9
PSO732G0428 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-07 60.1 55 40.0
PSO832G4384 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-07 60.1 55 40.0
MBI08_g39701_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.9e-07 59.7 55 41.8
Oeu052231.1 Olea europaea HOM05D000003 ORTHO05D000004 1.9e-07 59.7 60 41.7
PSO017G0464 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-07 59.7 57 42.1
PSO478G1369 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-07 59.7 55 45.5
PSO513G0009 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-07 59.7 54 42.6
PSO765G0218 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-07 59.7 55 43.6
QL04p090352 Quercus lobata HOM05D000003 ORTHO05D000004 1.9e-07 59.7 55 43.6
TWI36G1756 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.9e-07 59.7 56 42.9
TWI36G1780 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.9e-07 59.7 56 39.3
Oeu000958.1 Olea europaea HOM05D000412 ORTHO05D000429 2.5e-07 59.3 57 42.1
PSO478G4504 Papaver somniferum HOM05D000003 ORTHO05D000004 2.5e-07 59.3 70 41.4
CSS0006009 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.3e-07 58.9 52 44.2
CAN.G1549.10 Capsicum annuum HOM05D000003 ORTHO05D000004 3.3e-07 58.9 71 33.8
Oeu029571.1 Olea europaea HOM05D000554 ORTHO05D000860 3.3e-07 58.9 57 42.1
PSO782G1695 Papaver somniferum HOM05D000003 ORTHO05D000004 3.3e-07 58.9 57 40.4
QL07p018008 Quercus lobata HOM05D002389 ORTHO05D003227 3.3e-07 58.9 55 43.6
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 3.3e-07 58.9 57 42.1
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 3.3e-07 58.9 56 41.1
Sed0023069 Sechium edule HOM05D000003 ORTHO05D000004 3.3e-07 58.9 55 47.3
Aqoxy1G02814 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.3e-07 58.5 55 41.8
Aqoxy1G03491 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.3e-07 58.5 56 41.1
Aqoxy5G02123 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.3e-07 58.5 57 40.4
PSO782G4613 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-07 58.5 56 42.9
QL01p051842 Quercus lobata HOM05D001571 ORTHO05D002889 4.3e-07 58.5 122 26.2
Aqoxy6G02506 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.6e-07 58.2 57 35.1
PSO170G2251 Papaver somniferum HOM05D000003 ORTHO05D000004 5.6e-07 58.2 55 43.6
PSO782G0582 Papaver somniferum HOM05D000003 ORTHO05D000004 5.6e-07 58.2 56 39.3
QL02p033301 Quercus lobata HOM05D000003 ORTHO05D000004 5.6e-07 58.2 56 39.3
QL12p026404 Quercus lobata HOM05D000003 ORTHO05D000004 5.6e-07 58.2 55 43.6
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 5.6e-07 58.2 55 38.2
Aqoxy1G03564 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.3e-07 57.8 57 36.8
Aqoxy5G03103 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.3e-07 57.8 57 40.4
CSS0011611 Camellia sinensis var. sinensis HOM05D002853 ORTHO05D003030 7.3e-07 57.8 55 40.0
MBI12_g01748_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.3e-07 57.8 57 40.4
PSO104G0163 Papaver somniferum HOM05D000003 ORTHO05D000004 7.3e-07 57.8 57 43.9
PSO210G2794 Papaver somniferum HOM05D000003 ORTHO05D000004 7.3e-07 57.8 55 40.0
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 7.3e-07 57.8 55 38.2
MBI06_g21005_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.5e-07 57.4 56 37.5
PSO017G4751 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-07 57.4 55 36.4
PSO674G0005 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-07 57.4 55 40.0
PSO832G1539 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-07 57.4 56 41.1
MBI14_g25243_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.2e-06 57.0 56 41.1
MBI15_g00074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.2e-06 57.0 56 42.9
PSO832G4360 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-06 57.0 57 42.1
TWI31G0071 Tripterygium wilfordii HOM05D000003 ORTHO05D043560 1.2e-06 57.0 55 45.5
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-06 56.6 55 41.8
MBI16_g05778_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 1.6e-06 56.6 57 40.4
PSO063G0849 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-06 56.6 55 40.0
PSO063G7457 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-06 56.6 58 37.9
PSO170G3853 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-06 56.6 55 38.2
QL12p004433 Quercus lobata HOM05D004277 ORTHO05D005148 1.6e-06 56.6 57 35.1
Aqoxy6G01770 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.1e-06 56.2 56 39.3
PSO339G3497 Papaver somniferum HOM05D000003 ORTHO05D000004 2.1e-06 56.2 57 40.4
PSO393G0001 Papaver somniferum HOM05D000003 ORTHO05D000004 2.1e-06 56.2 56 39.3
Aqoxy3G01412 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.8e-06 55.8 57 40.4
Aqoxy7G02499 Aquilegia oxysepala HOM05D012730 ORTHO05D000004 2.8e-06 55.8 56 37.5
CSS0007226 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-06 55.8 67 37.3
ECA236G3303 Erigeron canadensis HOM05D006408 ORTHO05D008038 2.8e-06 55.8 56 37.5
PSO781G0332 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-06 55.8 55 41.8
PSO832G3958 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-06 55.8 57 40.4
SHI29190 Sapria himalayana HOM05D000003 ORTHO05D000004 2.8e-06 55.8 55 36.4
Sopen06g010980 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-06 55.8 54 37.0
Aqoxy2G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 3.6e-06 55.5 51 41.2
CSS0006535 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-06 55.5 52 40.4
PSO017G3012 Papaver somniferum HOM05D000003 ORTHO05D000004 3.6e-06 55.5 55 40.0
PSO063G1708 Papaver somniferum HOM05D000003 ORTHO05D000004 3.6e-06 55.5 55 40.0
PSO063G7102 Papaver somniferum HOM05D000003 ORTHO05D000004 3.6e-06 55.5 55 43.6
PSO170G3677 Papaver somniferum HOM05D000003 ORTHO05D000004 3.6e-06 55.5 57 36.8
TPR.G27496 Trifolium pratense HOM05D000003 ORTHO05D000004 3.6e-06 55.5 57 36.8
Atru.chr1.2043 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-06 55.1 56 41.1
ClCG05G011290 Citrullus lanatus HOM05D000003 ORTHO05D000004 4.7e-06 55.1 55 45.5
PSO674G0014 Papaver somniferum HOM05D000003 ORTHO05D000004 4.7e-06 55.1 52 42.3
QL08p044806 Quercus lobata HOM05D004223 ORTHO05D004792 4.7e-06 55.1 57 43.9
Aqoxy2G01461 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.2e-06 54.7 56 39.3
Aqoxy6G02514 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.2e-06 54.7 56 37.5
ClCG04G012890 Citrullus lanatus HOM05D000003 ORTHO05D000004 6.2e-06 54.7 55 43.6
PSO357G0573 Papaver somniferum HOM05D000003 ORTHO05D000004 6.2e-06 54.7 57 38.6
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 6.2e-06 54.7 57 42.1
CSS0011287 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.1e-06 54.3 54 42.6
MBI08_g41671_MAGBIO Magnolia biondii HOM05D001787 ORTHO05D000004 8.1e-06 54.3 49 40.8
PSO210G2854 Papaver somniferum HOM05D000003 ORTHO05D000004 8.1e-06 54.3 59 37.3
PSO384G1525 Papaver somniferum HOM05D000003 ORTHO05D000004 8.1e-06 54.3 56 39.3
PSO384G2326 Papaver somniferum HOM05D000003 ORTHO05D000004 8.1e-06 54.3 55 41.8
PSO675G9069 Papaver somniferum HOM05D000003 ORTHO05D000004 8.1e-06 54.3 55 38.2


User provided reference genes

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