Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc15.135 Carica papaya HOM05D067736 ORTHO05D118939 1.4e-182 642.9 344 100.0
Duzib084G1440 Durio zibethinus HOM05D000375 ORTHO05D000240 3.8e-26 123.2 260 36.9
Thecc.03G219200 Theobroma cacao HOM05D000375 ORTHO05D000240 8.4e-26 122.1 297 36.0
Cpa.g.c47772.2 Carica papaya HOM05D067736 ORTHO05D117805 3.2e-25 120.2 71 100.0
Duzib205G0789 Durio zibethinus HOM05D000375 ORTHO05D000240 3.2e-25 120.2 301 37.9
Gohir.A12G240900 Gossypium hirsutum HOM05D000375 ORTHO05D000240 4.6e-24 116.3 291 34.7
Gorai.008G259500 Gossypium raimondii HOM05D000375 ORTHO05D000240 2.3e-23 114.0 291 34.7
COL.COLO4_10813 Corchorus olitorius HOM05D000375 ORTHO05D000240 3.0e-23 113.6 316 34.5
Gohir.D12G242200 Gossypium hirsutum HOM05D000375 ORTHO05D000240 1.5e-22 111.3 282 34.8
Atru.chr9.1853 Acer truncatum HOM05D000375 ORTHO05D000240 9.6e-22 108.6 261 37.9
Potri.001G082700 Populus trichocarpa HOM05D000375 ORTHO05D000240 8.1e-21 105.5 294 34.7
Prupe.5G131600 Prunus persica HOM05D000375 ORTHO05D000240 1.1e-20 105.1 287 32.4
Ciclev10019828m.g Citrus clementina HOM05D000375 ORTHO05D000240 9.0e-20 102.1 271 35.4
MD06G1121000 Malus domestica HOM05D000375 ORTHO05D000240 8.4e-18 95.5 265 34.0
MD14G1137600 Malus domestica HOM05D000375 ORTHO05D000240 2.4e-17 94.0 259 34.0
Cfa011910 Carpinus fangiana HOM05D000375 ORTHO05D000240 9.3e-17 92.0 256 32.8
Haze_09188 Corylus avellana HOM05D000375 ORTHO05D000240 1.0e-15 88.6 258 31.4
CSS0002551 Camellia sinensis var. sinensis HOM05D000375 ORTHO05D000240 8.7e-15 85.5 302 29.8
THA.LOC104815306 Tarenaya hassleriana HOM05D000375 ORTHO05D000240 1.1e-14 85.1 264 31.8
Actinidia22212 Actinidia chinensis HOM05D000375 ORTHO05D000240 9.6e-14 82.0 264 32.2
Eucgr.D01674 Eucalyptus grandis HOM05D000375 ORTHO05D000240 9.6e-14 82.0 256 33.2
FAN04G2198 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.6e-13 81.3 249 32.5
RcHm_v2.0_Chr7g0187381 Rosa chinensis HOM05D000375 ORTHO05D000240 1.6e-13 81.3 201 35.8
CiPaw.11G111100 Carya illinoinensis HOM05D000375 ORTHO05D000240 2.8e-13 80.5 277 33.2
TAR636G1213 Trochodendron aralioides HOM05D000375 ORTHO05D000240 1.4e-12 78.2 273 32.2
FvH4_5g10750 Fragaria vesca HOM05D000375 ORTHO05D000240 1.8e-12 77.8 249 32.1
FAN18G1530 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.8e-12 77.8 249 32.1
FAN13G2770 Fragaria x ananassa HOM05D000375 ORTHO05D000240 2.4e-12 77.4 249 32.1
FAN08G2601 Fragaria x ananassa HOM05D000375 ORTHO05D000240 5.3e-12 76.3 256 32.8
GSVIVG01019667001 Vitis vinifera HOM05D000375 ORTHO05D000240 2.6e-11 73.9 299 30.1
Sabra03G0107600 Salix brachista HOM05D000375 ORTHO05D000240 3.4e-11 73.6 272 31.2
Rhsim02G0253100 Rhododendron simsii HOM05D000375 ORTHO05D000240 4.5e-11 73.2 283 29.7
Oeu013369.1 Olea europaea HOM05D000375 ORTHO05D000240 5.8e-11 72.8 261 28.4
Oeu013370.1 Olea europaea HOM05D000375 ORTHO05D000240 5.8e-11 72.8 261 28.4
CARHR231550 Cardamine hirsuta HOM05D000375 ORTHO05D000240 1.0e-10 72.0 283 32.2
Lj2A155G28 Lonicera japonica HOM05D000375 ORTHO05D000240 1.7e-10 71.2 214 32.7
Sabra01G0059400 Salix brachista HOM05D000375 ORTHO05D000240 9.3e-09 65.5 204 32.4
Eucgr.A01418 Eucalyptus grandis HOM05D000375 ORTHO05D000240 6.0e-08 62.8 268 27.2
ECA246G2646 Erigeron canadensis HOM05D000375 ORTHO05D000240 7.9e-08 62.4 259 26.6
AT4G24150 Arabidopsis thaliana HOM05D000375 ORTHO05D000240 1.0e-07 62.0 278 29.9
HanXRQChr06g0166741 Helianthus annuus HOM05D000375 ORTHO05D000240 1.3e-07 61.6 246 27.6
Nn3g18854 Nelumbo nucifera HOM05D000375 ORTHO05D000240 1.8e-07 61.2 315 26.3
vmacro11496 Vaccinium macrocarpon HOM05D000375 ORTHO05D000240 3.9e-07 60.1 109 38.5
Oeu042840.1 Olea europaea HOM05D000375 ORTHO05D000240 5.1e-07 59.7 259 28.2
Sp7g22110 Schrenkiella parvula HOM05D000375 ORTHO05D000240 5.1e-07 59.7 278 29.5
Actinidia04172 Actinidia chinensis HOM05D000375 ORTHO05D000240 6.7e-07 59.3 248 27.8
Dinv18748 Davidia involucrata HOM05D000375 ORTHO05D000240 8.7e-07 58.9 190 30.0
Oeu042841.1 Olea europaea HOM05D000375 ORTHO05D000240 8.7e-07 58.9 259 27.8
TWI60G1212 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 8.7e-07 58.9 251 27.9
Peaxi162Scf00074g00155 Petunia axillaris HOM05D000375 ORTHO05D000240 1.1e-06 58.5 264 26.9
AL7G29140 Arabidopsis lyrata HOM05D000375 ORTHO05D000240 1.5e-06 58.2 274 27.7
Carub.0007s1695 Capsella rubella HOM05D000375 ORTHO05D000240 1.9e-06 57.8 277 28.9
Thhalv10025371m.g Eutrema salsugineum HOM05D000375 ORTHO05D000240 1.9e-06 57.8 277 28.2
Sabra15G0004400 Salix brachista HOM05D000375 ORTHO05D000240 7.4e-06 55.8 280 26.4


User provided reference genes

Program Settings