Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc15.113 Carica papaya HOM05D000004 ORTHO05D000563 8.5e-67 256.9 134 100.0
Cpa.g.sc662.1 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-14 81.3 58 67.2
Cpa.g.sc40.58 Carica papaya HOM05D000004 ORTHO05D000563 3.9e-11 72.0 62 54.8
Cpa.g.sc60.53 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-10 70.5 64 56.2
Cpa.g.sc23.40 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-10 70.1 56 57.1
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 1.5e-10 70.1 58 58.6
Cpa.g.sc15.23 Carica papaya HOM05D000004 ORTHO05D000563 3.3e-10 68.9 167 31.1
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 4.3e-10 68.6 58 56.9
Cpa.g.sc3055.2 Carica papaya HOM05D000004 ORTHO05D000563 5.6e-10 68.2 52 61.5
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 7.3e-10 67.8 58 56.9
Cpa.g.sc0.37 Carica papaya HOM05D000004 ORTHO05D000563 9.6e-10 67.4 58 58.6
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 9.6e-10 67.4 58 56.9
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 9.6e-10 67.4 58 56.9
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 9.6e-10 67.4 58 56.9
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 9.6e-10 67.4 58 56.9
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 9.6e-10 67.4 58 56.9
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 9.6e-10 67.4 58 56.9
PGR119G0902 Punica granatum HOM05D000004 ORTHO05D000563 9.6e-10 67.4 58 56.9
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 9.6e-10 67.4 58 56.9
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 9.6e-10 67.4 58 56.9
PGR139G0001 Punica granatum HOM05D000004 ORTHO05D000002 9.6e-10 67.4 58 56.9
Cpa.g.sc98.1 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-09 67.0 58 51.7
Cpa.g.sc110.48 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-09 66.6 60 56.7
Cpa.g.sc137.20 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-09 66.6 56 57.1
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-09 66.6 58 56.9
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 2.1e-09 66.2 58 51.7
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 2.1e-09 66.2 58 51.7
Cpa.g.sc60.41 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-09 66.2 58 55.2
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-09 66.2 58 55.2
Cpa.g.sc1083.1 Carica papaya HOM05D000004 ORTHO05D000563 3.6e-09 65.5 58 53.4
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 3.6e-09 65.5 58 55.2
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.6e-09 65.5 139 30.2
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.6e-09 65.5 58 51.7
Cpa.g.sc24.52 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-09 65.1 44 68.2
Cpa.g.sc97.21 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-09 65.1 58 55.2
Cpa.g.sc0.47 Carica papaya HOM05D000004 ORTHO05D000563 6.2e-09 64.7 61 52.5
Cpa.g.sc28.154 Carica papaya HOM05D000004 ORTHO05D000563 6.2e-09 64.7 58 51.7
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 6.2e-09 64.7 58 55.2
Atru.chr8.715 Acer truncatum HOM05D000004 ORTHO05D000563 8.1e-09 64.3 58 53.4
Cpa.g.sc28.97 Carica papaya HOM05D000004 ORTHO05D000563 8.1e-09 64.3 58 51.7
Cpa.g.sc38.5 Carica papaya HOM05D000004 ORTHO05D000563 8.1e-09 64.3 52 51.9
Cpa.g.sc66.119 Carica papaya HOM05D000004 ORTHO05D000563 8.1e-09 64.3 57 54.4
TPR.G39664 Trifolium pratense HOM05D000004 ORTHO05D000563 8.1e-09 64.3 58 56.9
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-08 63.9 58 51.7
Cpa.g.sc175.28 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-08 63.5 61 50.8
Cpa.g.sc38.20 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-08 63.5 58 50.0
Cpa.g.sc4.1 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-08 63.5 57 56.1
THA.LOC104818554 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-08 63.5 56 50.0
Cpa.g.sc100.28 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-08 63.2 58 50.0
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-08 63.2 190 27.9
Cpa.g.sc24.72 Carica papaya HOM05D000004 ORTHO05D011645 1.8e-08 63.2 123 38.2
Cpa.g.sc3165.2 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-08 63.2 58 51.7
Cpa.g.sc3290.1 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-08 63.2 58 50.0
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 2.4e-08 62.8 58 48.3
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 2.4e-08 62.8 58 50.0
Cpa.g.sc1364.1 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-08 62.4 58 48.3
Cpa.g.sc143.12 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-08 62.4 58 50.0
Cpa.g.sc210.11 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-08 62.4 58 50.0
Cpa.g.sc372.1 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-08 62.4 58 50.0
Cpa.g.sc39.102 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-08 62.4 57 56.1
Cpa.g.sc391.4 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-08 62.4 58 50.0
Lalb_Chr19g0128701 Lupinus albus HOM05D000004 ORTHO05D000002 3.1e-08 62.4 58 53.4
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 4.0e-08 62.0 58 51.7
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 4.0e-08 62.0 58 51.7
PGR142G0162 Punica granatum HOM05D000004 ORTHO05D000002 4.0e-08 62.0 58 51.7
PGR142G4213 Punica granatum HOM05D000004 ORTHO05D000002 4.0e-08 62.0 58 53.4
Cpa.g.sc1555.2 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-08 61.6 58 51.7
Cpa.g.sc24.81 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-08 61.6 58 48.3
Cpa.g.sc28.107 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-08 61.6 58 51.7
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-08 61.6 56 50.0
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 5.2e-08 61.6 58 50.0
Lj5g0019047 Lotus japonicus HOM05D000004 ORTHO05D000563 6.8e-08 61.2 58 51.7
SHI44110 Sapria himalayana HOM05D000004 ORTHO05D000563 6.8e-08 61.2 58 46.6
SHI49228 Sapria himalayana HOM05D000004 ORTHO05D000563 6.8e-08 61.2 58 46.6
THA.LOC109116034 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.8e-08 61.2 56 50.0
Cpa.g.sc0.175 Carica papaya HOM05D000004 ORTHO05D000563 8.9e-08 60.8 58 50.0
Cpa.g.sc445.2 Carica papaya HOM05D000004 ORTHO05D000563 8.9e-08 60.8 58 48.3
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 8.9e-08 60.8 58 50.0
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 8.9e-08 60.8 58 51.7
Cpa.g.sc971.1 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-07 60.5 58 48.3
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-07 60.5 55 52.7
Cpa.g.sc39.88 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-07 60.1 175 29.7
PGR031G3733 Punica granatum HOM05D000004 ORTHO05D000563 1.5e-07 60.1 58 46.6
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-07 60.1 58 51.7
Cpa.g.sc0.19 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-07 59.7 53 56.6
Cpa.g.sc138.37 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-07 59.7 58 50.0
Cpa.g.sc305.5 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-07 59.7 58 48.3
Cpa.g.sc35.45 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-07 59.7 51 60.8
Cpa.g.sc971.2 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-07 59.7 58 46.6
THA.LOC109117128 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.0e-07 59.7 52 53.8
BNapus_Darmor_BZH_scaffold_75p00020 Brassica napus HOM05D000004 ORTHO05D000563 2.6e-07 59.3 54 51.9
Cpa.g.sc11.81 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-07 59.3 58 48.3
Cpa.g.sc225.4 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-07 59.3 48 54.2
Cpa.g.sc225.8 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-07 59.3 58 44.8
Cpa.g.sc440.2 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-07 59.3 58 48.3
Cpa.g.sc49.152 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-07 59.3 50 58.0
Cpa.g.sc66.63 Carica papaya HOM05D000004 ORTHO05D000563 2.6e-07 59.3 58 51.7
Atru.chr8.565 Acer truncatum HOM05D000004 ORTHO05D000563 3.4e-07 58.9 50 54.0
Cpa.g.sc154.9 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-07 58.9 58 46.6
Cpa.g.sc30.31 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-07 58.9 57 49.1
Cpa.g.sc30.36 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-07 58.9 45 55.6
Cpa.g.sc35.66 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-07 58.9 56 50.0
SpUn0040_0007 Schrenkiella parvula HOM05D000004 ORTHO05D000563 3.4e-07 58.9 56 48.2
Cpa.g.sc154.5 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-07 58.5 58 43.1
Cpa.g.sc2066.1 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-07 58.5 56 48.2
Cpa.g.sc207.15 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-07 58.5 54 50.0
Cpa.g.sc281.1 Carica papaya HOM05D000004 ORTHO05D000563 4.4e-07 58.5 50 56.0
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.4e-07 58.5 56 44.6
Cpa.g.sc22.44 Carica papaya HOM05D000004 ORTHO05D000002 5.8e-07 58.2 58 44.8
Cpa.g.sc32.157 Carica papaya HOM05D000004 ORTHO05D000563 5.8e-07 58.2 58 48.3
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 5.8e-07 58.2 152 28.3
THA.LOC104807122 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.8e-07 58.2 143 29.4
Cpa.g.sc28.155 Carica papaya HOM05D000004 ORTHO05D000563 7.6e-07 57.8 61 47.5
SHI46426 Sapria himalayana HOM05D000004 ORTHO05D000563 7.6e-07 57.8 56 44.6
TAR452G0004 Trochodendron aralioides HOM05D000004 ORTHO05D000563 7.6e-07 57.8 46 56.5
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 9.9e-07 57.4 56 44.6
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 9.9e-07 57.4 56 44.6
THA.LOC104822532 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.9e-07 57.4 56 44.6
Cpa.g.sc31.28 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-06 57.0 58 46.6
Cpa.g.sc32.163 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-06 57.0 58 44.8
Cpa.g.sc38.3 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-06 57.0 58 44.8
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-06 57.0 58 44.8
Cpa.g.sc0.192 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-06 56.6 60 46.7
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-06 56.6 58 46.6
THA.LOC104822353 Tarenaya hassleriana HOM05D000442 ORTHO05D001979 1.7e-06 56.6 55 47.3
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-06 56.2 124 33.1
Cpa.g.sc1884.2 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-06 55.8 58 46.6
Cpa.g.sc28.117 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-06 55.8 58 44.8
Cpa.g.sc79.56 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-06 55.8 58 46.6
THA.LOC104818534 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.8e-06 55.5 56 42.9
Cpa.g.sc56.54 Carica papaya HOM05D000004 ORTHO05D000563 4.9e-06 55.1 48 50.0
Sed0009597 Sechium edule HOM05D010826 ORTHO05D013073 4.9e-06 55.1 58 43.1
Cpa.g.sc210.2 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-06 54.7 58 41.4
Cpa.g.sc210.4 Carica papaya HOM05D000004 ORTHO05D000002 6.4e-06 54.7 58 41.4
Cpa.g.sc303.9 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-06 54.7 58 41.4
Cpa.g.sc60.45 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-06 54.7 58 48.3
Cpa.g.sc8.259 Carica papaya HOM05D000004 ORTHO05D000563 6.4e-06 54.7 58 44.8
SHI34774 Sapria himalayana HOM05D000004 ORTHO05D000002 6.4e-06 54.7 57 43.9
Cpa.g.sc11.128 Carica papaya HOM05D000004 ORTHO05D000563 8.4e-06 54.3 54 46.3
Cpa.g.sc110.31 Carica papaya HOM05D000004 ORTHO05D000563 8.4e-06 54.3 56 44.6
Cpa.g.sc220.7 Carica papaya HOM05D000004 ORTHO05D000563 8.4e-06 54.3 114 31.6
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 8.4e-06 54.3 58 43.1
Cpa.g.sc35.57 Carica papaya HOM05D000004 ORTHO05D000563 8.4e-06 54.3 52 46.2
Cpa.g.sc782.1 Carica papaya HOM05D000004 ORTHO05D000563 8.4e-06 54.3 58 43.1


User provided reference genes

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