Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc149.4 Carica papaya HOM05D000159 ORTHO05D000148 4.6e-77 291.2 151 100.0
GSVIVG01018205001 Vitis vinifera HOM05D000159 ORTHO05D000148 2.9e-39 165.6 150 63.3
Duzib138G1333 Durio zibethinus HOM05D000159 ORTHO05D000148 1.8e-36 156.4 150 60.0
Thecc.01G386500 Theobroma cacao HOM05D000159 ORTHO05D000148 3.0e-36 155.6 150 59.3
Potri.014G057800 Populus trichocarpa HOM05D000159 ORTHO05D000148 1.4e-33 146.7 150 57.3
MELO3C005966.2 Cucumis melo HOM05D000159 ORTHO05D000148 1.0e-31 140.6 141 58.9
CsaV3_3G007450 Cucumis sativus L. HOM05D000159 ORTHO05D000148 1.0e-31 140.6 141 58.2
QL04p035625 Quercus lobata HOM05D000159 ORTHO05D000148 1.3e-31 140.2 143 53.1
Gohir.D11G082200 Gossypium hirsutum HOM05D000159 ORTHO05D000148 7.2e-30 134.4 150 54.7
Gorai.007G087900 Gossypium raimondii HOM05D000159 ORTHO05D000148 7.2e-30 134.4 150 54.7
ClCG05G000290 Citrullus lanatus HOM05D000159 ORTHO05D000148 1.6e-29 133.3 143 58.0
CiPaw.13G030600 Carya illinoinensis HOM05D000159 ORTHO05D000148 3.6e-29 132.1 150 54.0
Gohir.A11G077800 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.0e-28 130.6 151 53.0
Aqoxy5G03857 Aquilegia oxysepala HOM05D000159 ORTHO05D000148 5.1e-28 128.3 146 53.4
Gorai.008G107300 Gossypium raimondii HOM05D000159 ORTHO05D000148 1.5e-27 126.7 147 53.7
Gohir.A12G095900 Gossypium hirsutum HOM05D000159 ORTHO05D000148 2.6e-27 125.9 148 53.4
PSO063G5655 Papaver somniferum HOM05D000159 ORTHO05D000148 7.4e-27 124.4 148 52.0
Gohir.D12G098600 Gossypium hirsutum HOM05D000159 ORTHO05D000148 9.7e-27 124.0 148 53.4
Sabra02G0110800 Salix brachista HOM05D000159 ORTHO05D000148 9.7e-27 124.0 148 52.0
Cc02_g24550 Coffea canephora HOM05D000159 ORTHO05D000148 1.3e-26 123.6 148 48.0
PSO782G4298 Papaver somniferum HOM05D000159 ORTHO05D000148 1.3e-26 123.6 148 52.0
CSS0018684 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 2.2e-26 122.9 134 56.7
Ciclev10020532m.g Citrus clementina HOM05D000159 ORTHO05D000148 3.7e-26 122.1 147 49.7
MD07G1111600 Malus domestica HOM05D000159 ORTHO05D000148 6.3e-26 121.3 159 51.6
Manes.05G050800 Manihot esculenta HOM05D000159 ORTHO05D000148 8.2e-26 120.9 141 51.1
Cfa011131 Carpinus fangiana HOM05D000159 ORTHO05D000148 4.1e-25 118.6 138 51.4
TAR629G1949 Trochodendron aralioides HOM05D000159 ORTHO05D000148 4.1e-25 118.6 147 53.1
Nn6g33926 Nelumbo nucifera HOM05D000159 ORTHO05D000148 6.9e-25 117.9 138 52.2
Prupe.2G135000 Prunus persica HOM05D000159 ORTHO05D000148 9.1e-25 117.5 162 50.0
Lj9A562T32 Lonicera japonica HOM05D000159 ORTHO05D000148 3.4e-24 115.5 151 49.7
Nn1g00969 Nelumbo nucifera HOM05D000159 ORTHO05D000148 4.5e-24 115.2 147 51.0
Dinv43653 Davidia involucrata HOM05D000159 ORTHO05D000148 1.0e-23 114.0 131 52.7
Dinv44105 Davidia involucrata HOM05D000159 ORTHO05D000148 1.7e-23 113.2 127 51.2
COL.COLO4_12462 Corchorus olitorius HOM05D000159 ORTHO05D000148 3.2e-22 109.0 160 51.2
Eucgr.D02505 Eucalyptus grandis HOM05D000159 ORTHO05D000148 1.2e-21 107.1 134 53.0
Hma1.2p1_0341F.1_g130340 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 2.1e-21 106.3 142 47.2
Atru.chr5.211 Acer truncatum HOM05D000159 ORTHO05D000148 6.1e-21 104.8 177 44.6
Sed0004480 Sechium edule HOM05D000159 ORTHO05D000148 1.8e-20 103.2 140 49.3
vmacro13462 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 2.8e-18 95.9 142 47.2
CDE11G0748 Ceratophyllum demersum HOM05D000159 ORTHO05D000148 4.8e-18 95.1 144 43.8
Sabra14G0042000 Salix brachista HOM05D000159 ORTHO05D000148 6.3e-18 94.7 99 57.6
DCAR_015862 Daucus carota HOM05D000159 ORTHO05D000148 8.2e-18 94.4 134 44.0
TAR636G2472 Trochodendron aralioides HOM05D000159 ORTHO05D000148 1.4e-17 93.6 151 47.0
FAN10G1714 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.2e-16 90.5 171 44.4
FAN10G3354 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.2e-16 90.5 171 44.4
FvH4_7g10680 Fragaria vesca HOM05D000159 ORTHO05D000148 1.6e-16 90.1 171 44.4
FAN06G2745 Fragaria x ananassa HOM05D000159 ORTHO05D000148 2.6e-16 89.4 171 44.4
Actinidia22775 Actinidia chinensis HOM05D000159 ORTHO05D000148 4.5e-16 88.6 138 44.2
Actinidia22829 Actinidia chinensis HOM05D000159 ORTHO05D000148 5.9e-16 88.2 140 43.6
FAN06G2851 Fragaria x ananassa HOM05D000159 ORTHO05D000148 7.7e-16 87.8 171 43.9
FAN01G0981 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.3e-15 87.0 171 43.3
FAN03G0010 Fragaria x ananassa HOM05D000159 ORTHO05D000148 2.2e-15 86.3 171 43.9
Actinidia12173 Actinidia chinensis HOM05D000159 ORTHO05D000148 3.8e-15 85.5 140 45.0
Glyma.01G075800 Glycine max HOM05D000159 ORTHO05D000148 6.5e-15 84.7 77 58.4
CDE02G0489 Ceratophyllum demersum HOM05D000159 ORTHO05D000148 8.5e-15 84.3 145 43.4
TPR.G39073 Trifolium pratense HOM05D000159 ORTHO05D000148 1.9e-14 83.2 77 57.1
VMungo1383G3157 Vigna mungo HOM05D000159 ORTHO05D000148 2.5e-14 82.8 77 57.1
Phvul.008G157100 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 4.2e-14 82.0 77 55.8
RcHm_v2.0_Chr1g0348611 Rosa chinensis HOM05D000159 ORTHO05D000148 9.4e-14 80.9 175 41.1
Rhsim07G0032800 Rhododendron simsii HOM05D000159 ORTHO05D000148 1.2e-13 80.5 141 44.7
Lj1g0005415 Lotus japonicus HOM05D000159 ORTHO05D000148 2.1e-13 79.7 78 55.1
Medtr7g444860 Medicago truncatula HOM05D000159 ORTHO05D000148 6.1e-13 78.2 73 54.8
Psat3g157680 Pisum sativum HOM05D000159 ORTHO05D000148 2.3e-12 76.3 77 53.2
Ca_03256_v3 Cicer arietinum L. HOM05D000159 ORTHO05D000148 5.2e-12 75.1 71 53.5
Peaxi162Scf00001g00534 Petunia axillaris HOM05D000159 ORTHO05D000148 1.2e-11 73.9 140 38.6
Glyma.11G163828 Glycine max HOM05D000159 ORTHO05D000148 4.4e-11 72.0 78 53.8
CSS0041251 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 2.2e-10 69.7 133 41.4
Haze_02732 Corylus avellana HOM05D000159 ORTHO05D000148 2.2e-10 69.7 138 37.0
PGR004G1093 Punica granatum HOM05D000159 ORTHO05D000148 2.4e-09 66.2 138 41.3
Oeu063208.1 Olea europaea HOM05D000159 ORTHO05D000148 1.3e-07 60.5 132 40.2
CiPaw.14G024200 Carya illinoinensis HOM05D000159 ORTHO05D000148 2.2e-07 59.7 95 46.3
TWI23G0392 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 8.5e-07 57.8 133 43.6
TWI59G0325 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 5.5e-06 55.1 115 41.7


User provided reference genes

Program Settings