Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc148.32 Carica papaya HOM05D002759 ORTHO05D003290 0.0e+00 1392.5 690 100.0
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 8.1e-238 827.4 655 64.9
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 4.0e-237 825.1 655 64.9
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 1.7e-235 819.7 652 64.1
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 1.6e-233 813.1 653 64.9
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 2.2e-227 792.7 653 62.8
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 5.6e-223 778.1 653 60.6
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 1.5e-220 770.0 649 60.1
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 7.6e-220 767.7 652 61.0
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 3.0e-216 755.7 653 60.0
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 5.1e-216 755.0 652 61.7
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 5.1e-216 755.0 654 60.1
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 1.5e-215 753.4 678 57.1
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 1.3e-214 750.4 652 61.3
MD15G1419000 Malus domestica HOM05D002759 ORTHO05D003290 4.5e-212 741.9 643 61.6
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 1.3e-211 740.3 644 58.7
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 6.5e-211 738.0 666 57.1
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.4e-210 736.9 649 59.3
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 2.1e-209 733.0 664 59.2
Gohir.D01G167432 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.4e-208 730.3 653 57.9
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 6.7e-208 728.0 644 59.8
Gohir.A01G176651 Gossypium hirsutum HOM05D002759 ORTHO05D003290 2.5e-207 726.1 653 57.4
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 2.5e-207 726.1 653 57.4
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.4e-205 720.3 662 57.4
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 7.2e-202 708.0 652 59.2
Lj9A311T56 Lonicera japonica HOM05D002759 ORTHO05D003290 1.6e-201 706.8 655 56.6
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 2.1e-201 706.4 651 57.5
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 7.9e-201 704.5 659 56.4
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.8e-200 703.4 654 57.0
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 3.0e-200 702.6 659 56.0
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 3.9e-200 702.2 663 55.4
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 3.9e-200 702.2 663 55.4
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 1.1e-199 700.7 659 55.7
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 7.4e-199 698.0 660 55.8
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 9.7e-199 697.6 659 55.7
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 3.7e-198 695.7 663 55.4
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 3.1e-197 692.6 649 55.5
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 3.5e-196 689.1 650 54.5
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 1.0e-195 687.6 644 55.1
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 1.3e-195 687.2 644 55.0
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 1.7e-195 686.8 672 54.5
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 1.7e-195 686.8 650 54.6
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 2.2e-195 686.4 653 55.3
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.9e-195 686.0 644 55.6
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 6.5e-195 684.9 647 54.4
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 1.5e-194 683.7 644 55.6
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 4.2e-194 682.2 659 55.7
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 7.2e-194 681.4 661 54.3
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 7.2e-194 681.4 644 55.3
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 1.2e-193 680.6 657 56.3
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 3.6e-193 679.1 656 55.2
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 6.1e-193 678.3 653 53.8
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 1.4e-192 677.2 658 54.6
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 1.4e-192 677.2 648 54.2
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 2.3e-192 676.4 590 59.8
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 2.0e-191 673.3 653 53.4
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 2.4e-189 666.4 648 54.2
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 4.7e-185 652.1 647 53.3
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 7.5e-183 644.8 650 52.3
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 9.7e-183 644.4 695 48.6
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 1.1e-181 641.0 648 52.3
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 1.4e-181 640.6 643 52.6
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 5.9e-180 635.2 649 51.8
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 2.2e-179 633.3 677 52.3
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 5.0e-179 632.1 686 49.9
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 8.5e-179 631.3 648 50.2
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 2.1e-177 626.7 649 51.9
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 4.7e-177 625.5 650 51.4
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 4.0e-176 622.5 660 50.2
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 6.8e-176 621.7 618 53.7
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 2.0e-175 620.2 657 50.5
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 9.8e-175 617.8 650 51.5
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 3.7e-174 615.9 647 49.3
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 3.7e-174 615.9 657 50.1
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 8.3e-174 614.8 659 49.8
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 1.8e-173 613.6 661 50.2
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 2.7e-172 609.8 655 50.7
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.6e-169 600.5 647 48.8
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.6e-169 600.5 647 48.8
FAN04G1156 Fragaria x ananassa HOM05D002759 ORTHO05D003290 4.7e-169 599.0 683 49.3
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 2.3e-168 596.7 643 49.0
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 6.8e-168 595.1 651 49.9
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 1.2e-167 594.3 653 49.0
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 1.3e-166 590.9 648 48.6
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 2.0e-164 583.6 502 58.6
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 6.1e-161 572.0 644 48.8
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 3.7e-158 562.8 650 46.8
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 2.0e-156 557.0 644 47.0
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 3.5e-156 556.2 704 45.7
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 1.2e-153 547.7 651 46.5
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 6.2e-153 545.4 651 46.9
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 1.8e-152 543.9 683 45.2
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 2.3e-152 543.5 647 46.7
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 3.7e-150 536.2 648 47.1
MSTRG.16534 Avicennia marina HOM05D002759 ORTHO05D003290 4.9e-150 535.8 646 45.5
Hund21015 Selenicereus undatus HOM05D002759 ORTHO05D003290 3.2e-149 533.1 658 45.7
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 3.0e-147 526.6 629 46.3
Os02g0770700 Oryza sativa ssp. japonica HOM05D002759 ORTHO05D003290 3.9e-139 499.6 659 42.6
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 1.5e-130 471.1 660 40.9
arahy.Tifrunner.gnm1.ann1.JK8JKR Arachis hypogaea HOM05D002759 ORTHO05D003290 4.3e-130 469.5 646 40.7
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 5.8e-127 459.1 645 41.6
HPP92_009112 Vanilla planifolia HOM05D002759 ORTHO05D003290 6.9e-120 435.6 663 40.6
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 6.4e-118 429.1 570 44.7
BolC4t22942H Brassica oleracea HOM05D002759 ORTHO05D003290 1.1e-117 428.3 577 44.0
BcaB02g09105 Brassica carinata HOM05D002759 ORTHO05D003290 1.2e-116 424.9 568 44.2
C04p12980 Brassica napus HOM05D002759 ORTHO05D003290 1.6e-116 424.5 571 45.0
ATR0661G182 Amborella trichopoda HOM05D002759 ORTHO05D003290 2.1e-116 424.1 530 46.6
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 3.1e-112 410.2 652 41.9
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 3.8e-110 403.3 385 55.8
FAN08G3490 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.7e-102 377.9 519 45.7
CARHR230010 Cardamine hirsuta HOM05D002759 ORTHO05D003290 2.5e-101 374.0 384 52.3
FvH4_5g29930 Fragaria vesca HOM05D002759 ORTHO05D003290 2.0e-95 354.4 311 58.8
FAN13G1302 Fragaria x ananassa HOM05D002759 ORTHO05D003290 3.8e-94 350.1 430 47.0
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.1e-93 348.6 323 57.9
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 1.0e-91 342.0 567 39.2
BolC4t22359H Brassica oleracea HOM05D002759 ORTHO05D003290 9.7e-90 335.5 575 39.1
CARHR254480 Cardamine hirsuta HOM05D002759 ORTHO05D003290 8.2e-89 332.4 340 52.4
CARHR230000 Cardamine hirsuta HOM05D002759 ORTHO05D003290 1.7e-86 324.7 277 57.8
C04p13030 Brassica napus HOM05D002759 ORTHO05D003290 2.2e-86 324.3 415 47.0
vmacro01780 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 2.0e-82 311.2 280 55.4
SEGI_09006 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.8e-80 304.7 720 32.2
Atru.chr6.1022 Acer truncatum HOM05D002759 ORTHO05D003290 3.1e-80 303.9 259 62.2
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 8.5e-78 295.8 406 41.9
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.2e-75 286.6 211 69.2
SMO356G0583 Selaginella moellendorffii HOM05D002759 ORTHO05D003290 1.4e-72 278.5 679 32.4
Ah.07g205400 Amaranthus hybridus HOM05D002759 ORTHO05D003290 2.4e-72 277.7 267 55.1
Pp3c8_2900 Physcomitrium patens HOM05D002759 ORTHO05D003290 1.0e-67 262.3 780 27.7
AagrBONN_evm.TU.Sc2ySwM_117.1581 Anthoceros agrestis HOM05D002759 ORTHO05D003290 1.8e-67 261.5 703 31.6
Mapoly0118s0005 Marchantia polymorpha HOM05D002759 ORTHO05D003290 9.8e-66 255.8 785 28.3
Atru.chr12.1442 Acer truncatum HOM05D002759 ORTHO05D003290 4.8e-65 253.4 567 36.0
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 1.1e-61 242.3 389 37.8
MD08G1226700 Malus domestica HOM05D002759 ORTHO05D003290 6.1e-60 236.5 271 51.3
SEGI_00066 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 4.9e-57 226.9 530 32.1
SEGI_24894 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.8e-56 224.9 532 32.3
Oeu043988.1 Olea europaea HOM05D002759 ORTHO05D003290 7.7e-55 219.5 563 28.8
vmacro01786 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 4.4e-50 203.8 159 64.2
GSVIVG01032173001 Vitis vinifera HOM05D002759 ORTHO05D003290 4.6e-47 193.7 164 61.6
Oeu037466.1 Olea europaea HOM05D002759 ORTHO05D003290 1.7e-46 191.8 187 51.3
RcHm_v2.0_Chr7g0223761 Rosa chinensis HOM05D002759 ORTHO05D003290 3.0e-46 191.0 182 54.4
unitig_26.g9017 Utricularia gibba HOM05D002759 ORTHO05D003290 5.6e-45 186.8 187 52.9
CBR_g18638 Chara braunii HOM05D002759 ORTHO05D003290 9.5e-45 186.0 350 34.3
GSVIVG01011206001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.3e-43 181.4 159 55.3
vmacro01782 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 1.4e-40 172.2 148 60.1
Aqoxy3G00697 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 4.1e-40 170.6 186 48.9
Actinidia00221 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.0e-38 166.0 164 55.5
C04p13080 Brassica napus HOM05D002759 ORTHO05D003290 1.7e-38 165.2 191 46.6
Cre01.g029200 Chlamydomonas reinhardtii HOM05D002759 ORTHO05D003290 4.7e-36 157.1 279 35.5
CARHR073260 Cardamine hirsuta HOM05D002759 ORTHO05D003290 5.8e-34 150.2 167 47.9
SHI26609 Sapria himalayana HOM05D002759 ORTHO05D003290 1.5e-29 135.6 164 43.3
GSVIVG01005672001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.5e-29 135.6 107 63.6
SEGI_22976 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.0e-22 112.8 303 29.7
vmacro01784 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 6.6e-22 110.2 151 42.4
vmacro18627 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 6.2e-20 103.6 243 33.7
COL.COLO4_16679 Corchorus olitorius HOM05D002759 ORTHO05D003290 2.6e-18 98.2 109 51.4
SEGI_36881 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.2e-15 89.4 147 38.8
GSVIVG01038033001 Vitis vinifera HOM05D002759 ORTHO05D003290 3.5e-15 87.8 66 60.6
Hund17373 Selenicereus undatus HOM05D002759 ORTHO05D003290 5.1e-14 84.0 83 48.2
Ca_21888_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.3e-12 79.3 102 38.2
RcHm_v2.0_Chr4g0428251 Rosa chinensis HOM05D002759 ORTHO05D003290 1.3e-12 79.3 136 33.8
CARHR254490 Cardamine hirsuta HOM05D002759 ORTHO05D003290 4.8e-12 77.4 144 36.1
CSS0010724 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D024697 7.6e-10 70.1 52 63.5
C03p84490 Brassica napus HOM05D002759 ORTHO05D032766 9.9e-10 69.7 52 65.4
CSS0008587 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D024697 1.3e-09 69.3 52 61.5
RcHm_v2.0_Chr4g0428261 Rosa chinensis HOM05D002759 ORTHO05D003290 3.8e-09 67.8 103 37.9
CSS0002368 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D024697 8.4e-09 66.6 52 61.5
unitig_26.g9018 Utricularia gibba HOM05D002759 ORTHO05D003290 8.4e-09 66.6 51 60.8
COL.COLO4_38329 Corchorus olitorius HOM05D002759 ORTHO05D003290 1.1e-08 66.2 83 44.6
C04p13010 Brassica napus HOM05D002759 ORTHO05D003290 5.4e-08 63.9 71 40.8
C04p13060 Brassica napus HOM05D002759 ORTHO05D003290 5.4e-08 63.9 71 40.8
BcaC01g00805 Brassica carinata HOM05D002759 ORTHO05D032766 6.0e-07 60.5 48 64.6
MD08G1226600 Malus domestica HOM05D002759 ORTHO05D003290 6.0e-07 60.5 67 52.2


User provided reference genes

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