Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 2.7e-146 522.3 261 100.0
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 1.2e-88 330.9 258 64.3
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 2.1e-82 310.1 246 65.9
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 1.0e-81 307.8 258 61.6
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 6.8e-81 305.1 257 62.3
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 1.5e-80 303.9 254 62.6
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 4.4e-80 302.4 249 61.4
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 7.5e-80 301.6 254 63.0
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 3.7e-79 299.3 254 59.1
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 3.2e-78 296.2 260 58.5
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 5.4e-78 295.4 255 58.4
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 9.2e-78 294.7 240 62.1
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 9.2e-78 294.7 258 58.1
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 5.0e-76 288.9 251 60.6
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 1.1e-75 287.7 251 60.2
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 2.5e-75 286.6 249 59.8
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.3e-73 280.0 255 61.2
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 5.2e-73 278.9 249 58.6
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 5.8e-72 275.4 252 60.3
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 9.8e-72 274.6 244 54.9
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 2.2e-71 273.5 216 60.6
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 2.9e-71 273.1 229 60.7
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 8.3e-71 271.6 258 56.2
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 4.1e-70 269.2 272 55.5
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 1.2e-69 267.7 251 56.6
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 6.0e-69 265.4 256 53.9
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 3.9e-68 262.7 199 62.3
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 8.6e-68 261.5 199 62.3
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 2.5e-67 260.0 208 61.1
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 2.1e-66 256.9 253 53.4
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 3.6e-66 256.1 215 59.1
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 3.6e-66 256.1 195 62.1
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 3.6e-66 256.1 181 69.1
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 1.8e-65 253.8 198 61.6
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 2.3e-65 253.4 246 54.5
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 4.0e-65 252.7 255 55.3
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 8.9e-65 251.5 249 53.0
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 1.2e-64 251.1 222 61.7
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 1.5e-64 250.8 179 70.9
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 2.0e-64 250.4 200 61.5
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 3.4e-64 249.6 199 59.3
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 4.4e-64 249.2 209 59.3
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 7.5e-64 248.4 211 59.7
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 9.8e-64 248.1 229 58.1
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 1.3e-63 247.7 189 66.1
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 6.4e-63 245.4 280 50.4
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 6.4e-63 245.4 177 68.9
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 1.4e-62 244.2 305 47.9
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 1.4e-62 244.2 261 50.6
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 2.4e-62 243.4 220 55.5
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 3.2e-62 243.0 248 52.8
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 4.1e-62 242.7 210 59.0
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 1.6e-61 240.7 216 58.8
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.7e-61 240.0 179 69.8
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 2.7e-61 240.0 255 49.0
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 3.5e-61 239.6 178 67.4
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 4.6e-61 239.2 224 54.5
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 1.0e-60 238.0 257 52.9
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.3e-60 237.7 211 61.6
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 2.3e-60 236.9 246 50.8
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 6.6e-60 235.3 257 51.0
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 1.5e-59 234.2 221 54.8
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 1.5e-59 234.2 260 46.9
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 3.3e-59 233.0 260 49.6
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 1.2e-58 231.1 207 59.9
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.2e-58 231.1 152 75.7
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.2e-58 231.1 152 75.7
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 1.2e-58 231.1 195 57.4
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.8e-58 229.9 206 60.2
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 4.7e-58 229.2 249 50.6
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 8.1e-58 228.4 193 60.1
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 8.1e-58 228.4 207 59.9
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 1.1e-57 228.0 228 54.4
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 1.4e-57 227.6 202 57.4
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 2.3e-57 226.9 248 50.4
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 7.6e-56 221.9 229 52.0
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 9.9e-56 221.5 204 54.9
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 2.9e-55 219.9 214 56.1
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 2.9e-55 219.9 256 45.7
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.9e-55 219.2 196 61.2
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.1e-54 218.0 206 59.2
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 8.6e-52 208.4 198 56.6
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 4.3e-51 206.1 217 49.8
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 5.8e-48 195.7 231 48.9
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 4.9e-47 192.6 222 50.5
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 5.4e-46 189.1 228 49.6
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 9.3e-46 188.3 131 72.5
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 1.2e-45 188.0 190 54.2
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 1.2e-45 188.0 131 70.2
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 1.6e-45 187.6 241 44.0
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 1.6e-45 187.6 164 59.1
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 2.7e-45 186.8 182 54.4
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 3.5e-45 186.4 185 53.5
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 3.5e-45 186.4 185 53.5
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 1.3e-44 184.5 120 75.0
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 2.3e-44 183.7 218 48.6
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 3.9e-44 183.0 180 52.8
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.5e-43 180.3 141 67.4
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 2.1e-42 177.2 228 41.7
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 2.8e-42 176.8 222 48.2
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 1.5e-40 171.0 133 67.7
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.0e-40 170.6 184 53.8
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 3.4e-40 169.9 116 71.6
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 4.5e-40 169.5 210 49.0
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 2.9e-39 166.8 107 72.9
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 9.3e-38 161.8 155 54.2
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 1.6e-37 161.0 214 45.8
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 1.8e-36 157.5 215 45.6
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 1.5e-35 154.5 136 59.6
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 3.3e-35 153.3 137 57.7
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 1.8e-33 147.5 178 43.3
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 1.5e-32 144.4 221 43.0
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 2.6e-32 143.7 205 42.9
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 3.8e-31 139.8 146 54.8
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 6.4e-31 139.0 135 50.4
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 1.2e-29 134.8 136 54.4
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 5.1e-28 129.4 130 48.5
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 9.6e-27 125.2 218 39.9
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 4.0e-25 119.8 111 58.6
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.8e-20 104.4 130 41.5
BcaNung03117 Brassica carinata HOM05D006008 ORTHO05D007334 3.2e-14 83.6 161 39.8
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 5.5e-14 82.8 61 67.2
HPP92_026434 Vanilla planifolia HOM05D002453 ORTHO05D002107 1.1e-09 68.6 169 28.4
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 4.1e-09 66.6 46 71.7
Ah.11g048530 Amaranthus hybridus HOM05D002453 ORTHO05D002107 2.0e-08 64.3 170 25.3
HanXRQChr16g0518411 Helianthus annuus HOM05D002453 ORTHO05D002107 2.6e-08 63.9 170 27.1
CAN.G1456.8 Capsicum annuum HOM05D002453 ORTHO05D002107 3.4e-08 63.5 172 26.2
PGR083G0367 Punica granatum HOM05D002453 ORTHO05D002107 3.4e-08 63.5 169 26.6
Lj5C111T12 Lonicera japonica HOM05D002453 ORTHO05D002107 4.5e-08 63.2 158 30.4
Actinidia25867 Actinidia chinensis HOM05D003039 ORTHO05D009478 7.7e-08 62.4 171 28.7
AUR62021699 Chenopodium quinoa HOM05D002453 ORTHO05D002107 1.0e-07 62.0 170 27.6
CsaV3_1G005400 Cucumis sativus L. HOM05D002453 ORTHO05D002107 1.0e-07 62.0 149 29.5
Phvul.008G197400 Phaseolus vulgaris HOM05D002453 ORTHO05D002107 1.0e-07 62.0 169 26.6
AUR62008396 Chenopodium quinoa HOM05D002453 ORTHO05D002107 3.8e-07 60.1 170 27.1
TPR.G9250 Trifolium pratense HOM05D002453 ORTHO05D002107 3.8e-07 60.1 158 27.2
VMungo0647G1609 Vigna mungo HOM05D002453 ORTHO05D002107 3.8e-07 60.1 169 26.0
BcaC08g46987 Brassica carinata HOM05D002453 ORTHO05D002107 5.0e-07 59.7 158 27.2
Nitab4.5_0005983g0010 Nicotiana tabacum HOM05D002453 ORTHO05D002107 5.0e-07 59.7 172 25.0
Psat4g051440 Pisum sativum HOM05D002453 ORTHO05D002107 6.5e-07 59.3 158 27.2
Prupe.5G192300 Prunus persica HOM05D002453 ORTHO05D002107 6.5e-07 59.3 169 27.2
Atru.chr9.2259 Acer truncatum HOM05D002453 ORTHO05D002107 1.1e-06 58.5 169 26.0
Nitab4.5_0000026g0050 Nicotiana tabacum HOM05D002453 ORTHO05D002107 1.1e-06 58.5 172 25.6
MSTRG.23026 Avicennia marina HOM05D002453 ORTHO05D002107 1.4e-06 58.2 172 25.6
FAN08G1232 Fragaria x ananassa HOM05D002453 ORTHO05D002107 1.4e-06 58.2 158 27.2
FAN18G2707 Fragaria x ananassa HOM05D002453 ORTHO05D002107 1.9e-06 57.8 158 27.2
Lsat_1_v5_gn_1_13300 Lactuca sativa HOM05D002453 ORTHO05D002107 1.9e-06 57.8 175 26.3
RcHm_v2.0_Chr7g0181161 Rosa chinensis HOM05D002453 ORTHO05D002107 1.9e-06 57.8 158 27.8
Glyma.17G099400 Glycine max HOM05D002453 ORTHO05D002107 2.5e-06 57.4 159 25.8
THA.LOC104807228 Tarenaya hassleriana HOM05D003056 ORTHO05D003422 2.5e-06 57.4 139 27.3
Manes.10G117700 Manihot esculenta HOM05D003039 ORTHO05D009478 3.2e-06 57.0 179 28.5
QL10p016708 Quercus lobata HOM05D002453 ORTHO05D002107 3.2e-06 57.0 158 27.8
CANSAT54G1800 Cannabis sativa HOM05D006008 ORTHO05D007334 4.2e-06 56.6 40 70.0
Thhalv10018469m.g Eutrema salsugineum HOM05D000424 ORTHO05D000355 4.2e-06 56.6 193 23.3
Hma1.2p1_0735F.1_g210570 Hydrangea macrophylla HOM05D002453 ORTHO05D002107 4.2e-06 56.6 158 28.5
Hma1.2p1_0735F.1_g210580 Hydrangea macrophylla HOM05D002453 ORTHO05D002107 4.2e-06 56.6 158 28.5
Cc04_g16730 Coffea canephora HOM05D002453 ORTHO05D002107 5.5e-06 56.2 169 24.9
FvH4_5g15040 Fragaria vesca HOM05D002453 ORTHO05D002107 5.5e-06 56.2 158 26.6
Medtr4g108650 Medicago truncatula HOM05D002453 ORTHO05D002107 5.5e-06 56.2 159 27.0
ClCG04G012320 Citrullus lanatus HOM05D002453 ORTHO05D002107 9.4e-06 55.5 169 26.6


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