Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 5.1e-148 527.7 263 100.0
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 8.7e-31 138.3 202 44.6
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 1.1e-30 137.9 203 44.3
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 6.2e-29 132.1 205 42.4
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 8.1e-29 131.7 217 39.6
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 9.0e-28 128.3 208 38.5
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 9.0e-28 128.3 208 38.5
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 1.2e-27 127.9 206 38.8
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 1.2e-27 127.9 199 43.2
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 1.5e-27 127.5 108 60.2
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 2.6e-27 126.7 206 39.3
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 3.4e-27 126.3 201 40.8
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 7.6e-27 125.2 208 39.9
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 1.3e-26 124.4 204 41.7
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 4.9e-26 122.5 210 36.7
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 1.4e-25 120.9 216 36.1
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 3.2e-25 119.8 209 36.8
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 4.2e-25 119.4 207 37.2
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 7.1e-25 118.6 213 35.2
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 9.3e-25 118.2 207 37.7
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 9.3e-25 118.2 202 42.1
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 1.2e-24 117.9 107 57.9
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 7.8e-24 115.2 121 49.6
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 1.7e-23 114.0 221 35.7
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 2.3e-23 113.6 199 36.7
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 2.3e-23 113.6 213 34.3
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 3.0e-23 113.2 242 32.2
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 3.0e-23 113.2 199 36.7
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 3.9e-23 112.8 217 36.4
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 6.6e-23 112.1 198 38.4
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 8.7e-23 111.7 206 37.4
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 8.7e-23 111.7 198 38.4
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 1.1e-22 111.3 201 35.8
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.1e-22 111.3 207 36.7
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 1.5e-22 110.9 199 36.2
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 2.5e-22 110.2 201 36.3
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 2.5e-22 110.2 117 48.7
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 2.5e-22 110.2 204 36.3
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 5.6e-22 109.0 191 38.2
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 1.3e-21 107.8 202 34.2
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.3e-21 107.8 202 37.6
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 2.1e-21 107.1 199 36.2
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 2.8e-21 106.7 204 33.3
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 3.6e-21 106.3 199 34.2
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 3.6e-21 106.3 199 34.2
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 6.2e-21 105.5 199 35.2
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 6.2e-21 105.5 219 33.8
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 8.1e-21 105.1 115 47.0
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 1.1e-20 104.8 187 40.1
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 2.4e-20 103.6 100 53.0
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 2.4e-20 103.6 102 52.0
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 5.3e-20 102.4 105 50.5
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 5.3e-20 102.4 201 35.8
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 9.0e-20 101.7 196 37.8
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 1.5e-19 100.9 200 35.0
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 1.5e-19 100.9 105 48.6
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 2.6e-19 100.1 204 34.8
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 2.6e-19 100.1 203 37.9
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 5.8e-19 99.0 238 34.0
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 1.7e-18 97.4 92 57.6
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 1.7e-18 97.4 198 33.8
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 2.9e-18 96.7 224 32.1
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 4.9e-18 95.9 99 53.5
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 4.9e-18 95.9 200 36.0
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 1.4e-17 94.4 107 46.7
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.4e-17 94.4 199 32.7
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.4e-17 94.4 98 51.0
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 1.9e-17 94.0 205 36.6
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 3.2e-17 93.2 224 31.7
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 3.2e-17 93.2 201 35.3
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 3.2e-17 93.2 205 36.6
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 5.4e-17 92.4 119 42.0
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 5.4e-17 92.4 210 33.8
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 5.4e-17 92.4 126 44.4
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 5.4e-17 92.4 126 44.4
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 7.1e-17 92.0 208 34.1
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 7.1e-17 92.0 209 30.6
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.6e-16 90.9 114 50.0
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 3.0e-15 86.7 213 35.7
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 6.7e-15 85.5 107 43.0
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 6.7e-15 85.5 99 44.4
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 1.5e-14 84.3 124 38.7
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 2.5e-14 83.6 98 50.0
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 4.3e-14 82.8 80 50.0
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 7.4e-14 82.0 200 30.0
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 4.0e-12 76.3 139 33.1
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 4.0e-12 76.3 82 50.0
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 4.0e-12 76.3 83 53.0
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 2.6e-11 73.6 55 65.5
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 2.2e-10 70.5 109 37.6
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 2.9e-10 70.1 52 59.6
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 4.9e-10 69.3 55 63.6
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 4.2e-09 66.2 93 43.0
Duzib116G0864 Durio zibethinus HOM05D006511 ORTHO05D007567 7.9e-08 62.0 112 35.7
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 3.9e-07 59.7 111 39.6
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 6.7e-07 58.9 196 29.1
vmacro11028 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.9e-06 57.4 56 46.4
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 3.3e-06 56.6 90 36.7


User provided reference genes

Program Settings