Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc142.43 Carica papaya HOM05D000129 ORTHO05D120921 1.6e-76 289.3 142 100.0
Lj4C73G4 Lonicera japonica HOM05D000129 ORTHO05D000997 2.6e-13 79.3 47 83.0
AUR62036019 Chenopodium quinoa HOM05D000129 ORTHO05D000997 4.4e-13 78.6 46 87.0
AUR62037950 Chenopodium quinoa HOM05D000129 ORTHO05D000997 4.4e-13 78.6 46 87.0
SGA_v2.0_scaffold152G36819 Striga asiatica HOM05D000129 ORTHO05D000997 4.4e-13 78.6 47 83.0
CAN.G674.46 Capsicum annuum HOM05D000129 ORTHO05D000997 5.7e-13 78.2 50 78.0
Cc10_g05070 Coffea canephora HOM05D000129 ORTHO05D000997 5.7e-13 78.2 46 84.8
Ah.11g039390 Amaranthus hybridus HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 84.8
ATR0739G155 Amborella trichopoda HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 84.8
arahy.Tifrunner.gnm1.ann1.2ZDN53 Arachis hypogaea HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 84.8
arahy.Tifrunner.gnm1.ann1.NRZN5K Arachis hypogaea HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 84.8
EL10Ac8g19856 Beta vulgaris HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 84.8
MBI16_g12921_MAGBIO Magnolia biondii HOM05D000129 ORTHO05D000997 7.5e-13 77.8 55 74.5
Nitab4.5_0005086g0020 Nicotiana tabacum HOM05D000129 ORTHO05D000997 7.5e-13 77.8 50 76.0
Nitab4.5_0005915g0040 Nicotiana tabacum HOM05D000129 ORTHO05D000997 7.5e-13 77.8 50 76.0
PSO541G1994 Papaver somniferum HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 84.8
PSO675G3743 Papaver somniferum HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 84.8
Peaxi162Scf00551g00610 Petunia axillaris HOM05D000129 ORTHO05D000997 7.5e-13 77.8 50 76.0
Hund02410 Selenicereus undatus HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 84.8
Sc15g0005610 Simmondsia chinensis HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 84.8
Sopen07g012030 Solanum pennellii HOM05D000129 ORTHO05D000997 7.5e-13 77.8 46 82.6
Ciclev10000142m.g Citrus clementina HOM05D000129 ORTHO05D000997 9.8e-13 77.4 46 82.6
COL.COLO4_28481 Corchorus olitorius HOM05D000129 ORTHO05D000997 9.8e-13 77.4 46 82.6
Duzib093G1703 Durio zibethinus HOM05D000129 ORTHO05D000997 9.8e-13 77.4 46 82.6
MD08G1080200 Malus domestica HOM05D000129 ORTHO05D000997 9.8e-13 77.4 46 82.6
Thecc.08G086700 Theobroma cacao HOM05D000129 ORTHO05D000997 9.8e-13 77.4 46 82.6
Ca_15897_v3 Cicer arietinum L. HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
DCAR_027593 Daucus carota HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
Migut.N02792 Erythranthe guttata HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
Eucgr.F02237 Eucalyptus grandis HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
Glyma.04G046700 Glycine max HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
Gohir.A05G210900 Gossypium hirsutum HOM05D000129 ORTHO05D000997 1.3e-12 77.0 55 70.9
Gohir.D05G214200 Gossypium hirsutum HOM05D000129 ORTHO05D000997 1.3e-12 77.0 55 70.9
Gorai.009G220900 Gossypium raimondii HOM05D000129 ORTHO05D000997 1.3e-12 77.0 55 70.9
Lj1g0005699 Lotus japonicus HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
Medtr3g103270 Medicago truncatula HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
PGR031G0208 Punica granatum HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
QL12p038296 Quercus lobata HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
Rhsim07G0219200 Rhododendron simsii HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
SalBow2G1224 Salvia bowleyana HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
TAR381G0044 Trochodendron aralioides HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
vmacro22048 Vaccinium macrocarpon HOM05D000129 ORTHO05D000997 1.3e-12 77.0 46 82.6
GSVIVG01009320001 Vitis vinifera HOM05D000129 ORTHO05D000997 1.3e-12 77.0 55 70.9
Actinidia19583 Actinidia chinensis HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 80.4
CSS0014514 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 80.4
Cfa013761 Carpinus fangiana HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 80.4
CiPaw.07G173500 Carya illinoinensis HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 80.4
CDE01G0220 Ceratophyllum demersum HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 82.6
Haze_22417 Corylus avellana HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 80.4
Dinv44942 Davidia involucrata HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 80.4
ECA232G0094 Erigeron canadensis HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 82.6
MD15G1067300 Malus domestica HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 80.4
Mapoly0044s0031 Marchantia polymorpha HOM05D000129 ORTHO05D000997 1.7e-12 76.6 45 86.7
Potri.014G014700 Populus trichocarpa HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 82.6
Prupe.1G421100 Prunus persica HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 80.4
Sabra14G0008800 Salix brachista HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 82.6
SEGI_00929 Sequoiadendron giganteum HOM05D000129 ORTHO05D000997 1.7e-12 76.6 46 82.6
HanXRQChr12g0368611 Helianthus annuus HOM05D000129 ORTHO05D000997 2.2e-12 76.3 46 80.4
Lsat_1_v5_gn_9_76580 Lactuca sativa HOM05D000129 ORTHO05D000997 2.2e-12 76.3 46 80.4
Os03g0730800 Oryza sativa ssp. japonica HOM05D000129 ORTHO05D000997 2.2e-12 76.3 46 82.6
HPP92_027954 Vanilla planifolia HOM05D000129 ORTHO05D000997 2.8e-12 75.9 46 80.4
Aqoxy6G02557 Aquilegia oxysepala HOM05D000129 ORTHO05D000997 3.7e-12 75.5 46 80.4
Lalb_Chr23g0267561 Lupinus albus HOM05D000129 ORTHO05D000997 3.7e-12 75.5 46 80.4
Manes.18G047600 Manihot esculenta HOM05D000129 ORTHO05D000997 3.7e-12 75.5 46 80.4
Nn5g30632 Nelumbo nucifera HOM05D000129 ORTHO05D000997 3.7e-12 75.5 46 78.3
Phvul.009G072800 Phaseolus vulgaris HOM05D000129 ORTHO05D000997 3.7e-12 75.5 46 80.4
VMungo1309G1806 Vigna mungo HOM05D000129 ORTHO05D000997 3.7e-12 75.5 46 80.4
Atru.chr13.850 Acer truncatum HOM05D000129 ORTHO05D000997 4.9e-12 75.1 46 82.6
AagrBONN_evm.TU.Sc2ySwM_344.3348 Anthoceros agrestis HOM05D000129 ORTHO05D000997 4.9e-12 75.1 46 80.4
Hma1.2p1_1170F.1_g263330 Hydrangea macrophylla HOM05D000129 ORTHO05D000997 4.9e-12 75.1 46 78.3
Psat5g037840 Pisum sativum HOM05D000129 ORTHO05D000997 4.9e-12 75.1 46 80.4
Zm00001eb056130 Zea mays HOM05D000129 ORTHO05D000997 4.9e-12 75.1 46 78.3
AL1G20820 Arabidopsis lyrata HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
AT1G10130 Arabidopsis thaliana HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
BcaB08g37340 Brassica carinata HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
BcaC05g24810 Brassica carinata HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
BcaC07g41841 Brassica carinata HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
A06p06780 Brassica napus HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
A09p65190 Brassica napus HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
C05p08260 Brassica napus HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
C08p49110 Brassica napus HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
BolC5t29577H Brassica oleracea HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
BolC8t52446H Brassica oleracea HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
BraA06t23893Z Brassica rapa HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
BraA09t41862Z Brassica rapa HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
Thhalv10006682m.g Eutrema salsugineum HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
Sp1g08760 Schrenkiella parvula HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
THA.LOC104816765 Tarenaya hassleriana HOM05D000129 ORTHO05D000997 6.3e-12 74.7 46 80.4
MELO3C010795.2 Cucumis melo HOM05D000129 ORTHO05D000997 8.3e-12 74.3 44 84.1
Potri.002G117400 Populus trichocarpa HOM05D000129 ORTHO05D000997 8.3e-12 74.3 46 78.3
Aa31LG1G4760 Aethionema arabicum HOM05D000129 ORTHO05D000997 1.1e-11 73.9 46 78.3
Carub.0001s0954 Capsella rubella HOM05D000129 ORTHO05D000997 1.1e-11 73.9 46 78.3
CsaV3_2G026010 Cucumis sativus L. HOM05D000129 ORTHO05D000997 1.1e-11 73.9 46 78.3
Sed0025438 Sechium edule HOM05D000129 ORTHO05D000997 1.4e-11 73.6 47 74.5
SMO268G0052 Selaginella moellendorffii HOM05D000129 ORTHO05D000997 1.4e-11 73.6 46 78.3
ClCG08G016600 Citrullus lanatus HOM05D000129 ORTHO05D000997 1.8e-11 73.2 46 76.1
FvH4_2g32870 Fragaria vesca HOM05D000129 ORTHO05D000997 1.8e-11 73.2 46 80.4
FAN15G0647 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.8e-11 73.2 46 80.4
FAN24G2434 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.8e-11 73.2 46 80.4
FAN27G3321 Fragaria x ananassa HOM05D000129 ORTHO05D000997 1.8e-11 73.2 46 80.4
Pp3c11_7920 Physcomitrium patens HOM05D000129 ORTHO05D000997 1.8e-11 73.2 46 78.3
RcHm_v2.0_Chr6g0309841 Rosa chinensis HOM05D000129 ORTHO05D000997 1.8e-11 73.2 46 80.4
CANSAT11G2151 Cannabis sativa HOM05D000129 ORTHO05D000997 2.4e-11 72.8 46 78.3
Oeu053077.1 Olea europaea HOM05D000129 ORTHO05D000997 7.0e-11 71.2 38 92.1
CBR_g19685 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-10 69.3 46 78.3
Actinidia38110 Actinidia chinensis HOM05D000129 ORTHO05D000997 3.5e-10 68.9 41 82.9
SHI08432 Sapria himalayana HOM05D000129 ORTHO05D000997 1.7e-09 66.6 41 82.9
Cre11.g467795 Chlamydomonas reinhardtii HOM05D000129 ORTHO05D000997 1.9e-08 63.2 45 68.9
MCO01G703 Micromonas commoda HOM05D000129 ORTHO05D000997 2.1e-07 59.7 69 53.6
Prupe.6G246300 Prunus persica HOM05D000129 ORTHO05D000997 3.6e-07 58.9 147 31.3
Potri.014G101900 Populus trichocarpa HOM05D000129 ORTHO05D000997 6.1e-07 58.2 106 39.6
Atru.chr5.720 Acer truncatum HOM05D000129 ORTHO05D000997 8.0e-07 57.8 107 40.2
CiPaw.01G079000 Carya illinoinensis HOM05D000129 ORTHO05D000997 1.0e-06 57.4 111 41.4
Mapoly0013s0119 Marchantia polymorpha HOM05D000129 ORTHO05D000997 1.4e-06 57.0 136 34.6
PSO782G1337 Papaver somniferum HOM05D000129 ORTHO05D000997 1.4e-06 57.0 138 32.6
HPP92_001827 Vanilla planifolia HOM05D000129 ORTHO05D000997 1.4e-06 57.0 110 38.2
Cpa.g.sc1192.1 Carica papaya HOM05D000129 ORTHO05D000997 1.8e-06 56.6 110 36.4
CSS0000439 Camellia sinensis var. sinensis HOM05D000129 ORTHO05D000997 2.3e-06 56.2 106 38.7
MD04G1116400 Malus domestica HOM05D000129 ORTHO05D000997 2.3e-06 56.2 147 32.0
TAR374G1426 Trochodendron aralioides HOM05D000129 ORTHO05D000997 2.3e-06 56.2 107 40.2
Aqoxy5G04318 Aquilegia oxysepala HOM05D000129 ORTHO05D000997 3.0e-06 55.8 107 39.3
MD12G1132100 Malus domestica HOM05D000129 ORTHO05D000997 3.0e-06 55.8 140 30.7
QL08p046124 Quercus lobata HOM05D000129 ORTHO05D000997 3.0e-06 55.8 106 38.7
VMungo0331G1607 Vigna mungo HOM05D000129 ORTHO05D000997 3.0e-06 55.8 107 39.3
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 4.0e-06 55.5 82 40.2
arahy.Tifrunner.gnm1.ann1.3U9JDY Arachis hypogaea HOM05D000129 ORTHO05D000997 5.2e-06 55.1 107 37.4
arahy.Tifrunner.gnm1.ann1.V96LGR Arachis hypogaea HOM05D000129 ORTHO05D000997 5.2e-06 55.1 107 37.4
Cc01_g12060 Coffea canephora HOM05D000129 ORTHO05D000997 5.2e-06 55.1 141 31.2
Dinv34233 Davidia involucrata HOM05D000129 ORTHO05D000997 5.2e-06 55.1 107 39.3
EL10Ac1g00225 Beta vulgaris HOM05D000129 ORTHO05D000997 6.8e-06 54.7 110 37.3
Medtr8g027160 Medicago truncatula HOM05D000129 ORTHO05D000997 6.8e-06 54.7 146 31.5
RcHm_v2.0_Chr3g0467981 Rosa chinensis HOM05D000129 ORTHO05D000997 6.8e-06 54.7 134 31.3
Hma1.2p1_0035F.1_g021810 Hydrangea macrophylla HOM05D000129 ORTHO05D000997 8.9e-06 54.3 114 31.6
Sabra14G0075000 Salix brachista HOM05D000129 ORTHO05D000997 8.9e-06 54.3 106 38.7
SEGI_12721 Sequoiadendron giganteum HOM05D000129 ORTHO05D000997 8.9e-06 54.3 108 39.8
vmacro12591 Vaccinium macrocarpon HOM05D000129 ORTHO05D000997 8.9e-06 54.3 107 39.3


User provided reference genes

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