Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc142.41 Carica papaya HOM05D002412 ORTHO05D002516 1.1e-72 276.6 143 100.0
Atru.chr13.848 Acer truncatum HOM05D002412 ORTHO05D002516 1.4e-19 100.1 142 57.0
Thecc.08G086800 Theobroma cacao HOM05D002412 ORTHO05D002516 1.9e-19 99.8 137 53.3
COL.COLO4_28483 Corchorus olitorius HOM05D002412 ORTHO05D002516 7.8e-18 94.4 139 48.9
Gorai.009G220800 Gossypium raimondii HOM05D002412 ORTHO05D002516 3.0e-17 92.4 148 45.9
Duzib093G1945 Durio zibethinus HOM05D002412 ORTHO05D002516 6.6e-17 91.3 146 49.3
Gohir.A05G210800 Gossypium hirsutum HOM05D002412 ORTHO05D002516 4.3e-16 88.6 133 47.4
Gohir.D05G214100 Gossypium hirsutum HOM05D002412 ORTHO05D002516 1.6e-15 86.7 133 46.6
Manes.18G047500 Manihot esculenta HOM05D002412 ORTHO05D002516 6.2e-15 84.7 130 46.2
Potri.002G117600 Populus trichocarpa HOM05D002412 ORTHO05D002516 6.2e-15 84.7 141 45.4
QL12p038263 Quercus lobata HOM05D002412 ORTHO05D002516 2.3e-14 82.8 138 45.7
QL93p0154_0003 Quercus lobata HOM05D002412 ORTHO05D002516 2.3e-14 82.8 138 45.7
Duzib041G0516 Durio zibethinus HOM05D002412 ORTHO05D002516 4.0e-14 82.0 136 50.7
Gohir.A02G080700 Gossypium hirsutum HOM05D002412 ORTHO05D002516 6.8e-14 81.3 147 42.9
Gohir.D02G088500 Gossypium hirsutum HOM05D002412 ORTHO05D002516 8.9e-14 80.9 147 42.9
Gorai.005G099200 Gossypium raimondii HOM05D002412 ORTHO05D002516 1.2e-13 80.5 147 42.9
Potri.014G015000 Populus trichocarpa HOM05D002412 ORTHO05D002516 2.6e-13 79.3 141 43.3
Ciclev10002703m.g Citrus clementina HOM05D002412 ORTHO05D002516 3.4e-13 79.0 145 41.4
Haze_22419 Corylus avellana HOM05D002412 ORTHO05D002516 9.9e-13 77.4 135 43.0
Glyma.04G046600 Glycine max HOM05D002412 ORTHO05D002516 2.9e-12 75.9 148 48.0
CiPaw.07G173700 Carya illinoinensis HOM05D002412 ORTHO05D002516 4.9e-12 75.1 135 44.4
TWI12G0423 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 6.4e-12 74.7 141 47.5
CsaV3_4G035130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 8.3e-12 74.3 136 41.2
Sabra02G0092100 Salix brachista HOM05D002412 ORTHO05D002516 1.4e-11 73.6 139 41.7
Aqoxy6G02560 Aquilegia oxysepala HOM05D002412 ORTHO05D002516 2.4e-11 72.8 126 42.9
CiPaw.08G050800 Carya illinoinensis HOM05D002412 ORTHO05D002516 5.4e-11 71.6 135 46.7
Sabra14G0009000 Salix brachista HOM05D002412 ORTHO05D002516 1.2e-10 70.5 79 54.4
Sed0022600 Sechium edule HOM05D002412 ORTHO05D002516 1.2e-10 70.5 126 41.3
Rhsim06G0063100 Rhododendron simsii HOM05D002412 ORTHO05D002516 1.6e-10 70.1 126 42.9
Actinidia19303 Actinidia chinensis HOM05D002412 ORTHO05D002516 2.1e-10 69.7 126 42.9
TWI12G0333 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 3.5e-10 68.9 149 40.9
CSS0002290 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 4.6e-10 68.6 128 43.0
ClCG05G020680 Citrullus lanatus HOM05D002412 ORTHO05D002516 1.0e-09 67.4 135 39.3
Psat0ss7070g0040 Pisum sativum HOM05D002412 ORTHO05D002516 1.3e-09 67.0 129 43.4
MELO3C016826.2 Cucumis melo HOM05D002412 ORTHO05D002516 1.7e-09 66.6 130 40.8
Nn6g34504 Nelumbo nucifera HOM05D002412 ORTHO05D002516 1.7e-09 66.6 132 40.9
TWI56G0446 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 3.0e-09 65.9 140 41.4
MSTRG.22217 Avicennia marina HOM05D002412 ORTHO05D002516 3.9e-09 65.5 138 39.9
Lj5g0023078 Lotus japonicus HOM05D002412 ORTHO05D002516 3.9e-09 65.5 133 42.9
Actinidia10209 Actinidia chinensis HOM05D002412 ORTHO05D002516 5.1e-09 65.1 126 42.1
THA.LOC104807210 Tarenaya hassleriana HOM05D002412 ORTHO05D002516 8.6e-09 64.3 135 41.5
Cc10_g05040 Coffea canephora HOM05D002412 ORTHO05D002516 1.5e-08 63.5 138 37.0
TAR381G0181 Trochodendron aralioides HOM05D002412 ORTHO05D002516 1.5e-08 63.5 128 42.2
TPR.G13172 Trifolium pratense HOM05D002412 ORTHO05D002516 1.9e-08 63.2 133 39.1
Nn5g30629 Nelumbo nucifera HOM05D002412 ORTHO05D002516 2.5e-08 62.8 129 43.4
Rhsim05G0091500 Rhododendron simsii HOM05D002412 ORTHO05D002516 4.3e-08 62.0 132 40.9
Lj1g0009349 Lotus japonicus HOM05D002412 ORTHO05D002516 5.6e-08 61.6 137 40.9
MD08G1080400 Malus domestica HOM05D002412 ORTHO05D002516 5.6e-08 61.6 138 42.0
TAR628G0919 Trochodendron aralioides HOM05D002412 ORTHO05D002516 5.6e-08 61.6 126 42.9
THA.LOC104819947 Tarenaya hassleriana HOM05D014607 ORTHO05D016575 7.3e-08 61.2 124 40.3
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 7.3e-08 61.2 133 38.3
MELO3C018019.2 Cucumis melo HOM05D002412 ORTHO05D002516 9.5e-08 60.8 142 39.4
Lalb_Chr11g0062941 Lupinus albus HOM05D002412 ORTHO05D002516 9.5e-08 60.8 145 41.4
A01p04520 Brassica napus HOM05D002412 ORTHO05D002516 1.2e-07 60.5 143 37.1
FAN20G2155 Fragaria x ananassa HOM05D002412 ORTHO05D002516 1.2e-07 60.5 134 42.5
ClCG08G016590 Citrullus lanatus HOM05D002412 ORTHO05D002516 1.6e-07 60.1 131 39.7
Phvul.001G028800 Phaseolus vulgaris HOM05D002412 ORTHO05D002516 1.6e-07 60.1 132 40.2
Thhalv10023721m.g Eutrema salsugineum HOM05D014607 ORTHO05D016575 2.1e-07 59.7 132 37.9
Ca_13210_v3 Cicer arietinum L. HOM05D002412 ORTHO05D002516 2.8e-07 59.3 132 40.2
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 2.8e-07 59.3 125 42.4
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 2.8e-07 59.3 125 42.4
Peaxi162Scf00081g00269 Petunia axillaris HOM05D002412 ORTHO05D002516 2.8e-07 59.3 138 37.7
TAR376G0005 Trochodendron aralioides HOM05D002412 ORTHO05D002516 2.8e-07 59.3 141 34.0
CANSAT25G2021 Cannabis sativa HOM05D002412 ORTHO05D002516 3.6e-07 58.9 144 38.2
Glyma.14G089039 Glycine max HOM05D002412 ORTHO05D002516 3.6e-07 58.9 131 40.5
MD15G1067500 Malus domestica HOM05D002412 ORTHO05D002516 3.6e-07 58.9 138 41.3
Prupe.1G421400 Prunus persica HOM05D002412 ORTHO05D002516 3.6e-07 58.9 135 42.2
Thecc.02G118800 Theobroma cacao HOM05D002412 ORTHO05D002516 3.6e-07 58.9 137 38.7
VMungo0647G1017 Vigna mungo HOM05D002412 ORTHO05D002516 3.6e-07 58.9 136 39.7
A03p62330 Brassica napus HOM05D002412 ORTHO05D002516 4.7e-07 58.5 140 36.4
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 4.7e-07 58.5 140 36.4
Ciclev10029343m.g Citrus clementina HOM05D002412 ORTHO05D002516 4.7e-07 58.5 137 37.2
Dinv44944 Davidia involucrata HOM05D002412 ORTHO05D002516 4.7e-07 58.5 136 38.2
RhsimUnG0041400 Rhododendron simsii HOM05D002412 ORTHO05D002516 4.7e-07 58.5 133 36.8
RhsimUnG0123400 Rhododendron simsii HOM05D002412 ORTHO05D002516 4.7e-07 58.5 133 36.8
BcaC09g52190 Brassica carinata HOM05D002412 ORTHO05D002516 6.2e-07 58.2 143 36.4
C01p04900 Brassica napus HOM05D002412 ORTHO05D002516 6.2e-07 58.2 143 36.4
BolC1t00474H Brassica oleracea HOM05D002412 ORTHO05D002516 6.2e-07 58.2 143 36.4
CSS0003834 Camellia sinensis var. sinensis HOM05D002412 ORTHO05D002516 6.2e-07 58.2 135 43.0
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 6.2e-07 58.2 133 37.6
HanXRQChr03g0065031 Helianthus annuus HOM05D002412 ORTHO05D002516 6.2e-07 58.2 127 37.0
ClCG10G010090 Citrullus lanatus HOM05D002412 ORTHO05D002516 8.1e-07 57.8 149 38.9
TPR.G8322 Trifolium pratense HOM05D002412 ORTHO05D002516 8.1e-07 57.8 130 40.0
CARHR283950 Cardamine hirsuta HOM05D014607 ORTHO05D016575 1.4e-06 57.0 134 40.3
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 1.8e-06 56.6 143 35.7
C07p59890 Brassica napus HOM05D002412 ORTHO05D002516 1.8e-06 56.6 143 36.4
BolC7t46433H Brassica oleracea HOM05D002412 ORTHO05D002516 1.8e-06 56.6 143 36.4
BraA01t00437Z Brassica rapa HOM05D002412 ORTHO05D002516 1.8e-06 56.6 140 37.1
Carub.0002s0605 Capsella rubella HOM05D014607 ORTHO05D016575 1.8e-06 56.6 132 39.4
Medtr1g017890 Medicago truncatula HOM05D002412 ORTHO05D002516 1.8e-06 56.6 135 39.3
SalBow6G4199 Salvia bowleyana HOM05D002412 ORTHO05D002516 1.8e-06 56.6 128 37.5
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 3.1e-06 55.8 141 35.5
CsaV3_4G000130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 3.1e-06 55.8 142 38.7
Psat6g017720 Pisum sativum HOM05D002412 ORTHO05D002516 3.1e-06 55.8 133 38.3
Ah.01g007050 Amaranthus hybridus HOM05D002412 ORTHO05D002516 4.0e-06 55.5 153 35.9
Sp2g05130 Schrenkiella parvula HOM05D014607 ORTHO05D016575 4.0e-06 55.5 134 36.6
vmacro19537 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 4.0e-06 55.5 127 39.4
FAN15G1065 Fragaria x ananassa HOM05D002412 ORTHO05D002516 5.2e-06 55.1 132 44.7
Glyma.17G234000 Glycine max HOM05D002412 ORTHO05D002516 5.2e-06 55.1 124 39.5
Sed0010950 Sechium edule HOM05D002412 ORTHO05D002516 5.2e-06 55.1 122 36.9
Actinidia00360 Actinidia chinensis HOM05D002412 ORTHO05D002516 6.8e-06 54.7 125 36.8
AT1G58460 Arabidopsis thaliana HOM05D014607 ORTHO05D016575 6.8e-06 54.7 132 38.6
Gohir.A06G024600 Gossypium hirsutum HOM05D002412 ORTHO05D002516 6.8e-06 54.7 80 46.2
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 6.8e-06 54.7 129 39.5
PSO170G3219 Papaver somniferum HOM05D002412 ORTHO05D002516 6.8e-06 54.7 136 34.6
Sed0002993 Sechium edule HOM05D002412 ORTHO05D002516 6.8e-06 54.7 140 34.3
CARHR241890 Cardamine hirsuta HOM05D002412 ORTHO05D002516 8.9e-06 54.3 137 37.2
AUR62041661 Chenopodium quinoa HOM05D002412 ORTHO05D002516 8.9e-06 54.3 137 42.3
Dinv15818 Davidia involucrata HOM05D002412 ORTHO05D002516 8.9e-06 54.3 129 35.7


User provided reference genes

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