Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 7.2e-283 976.5 461 100.0
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 1.2e-274 949.1 461 97.0
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 2.2e-167 592.8 474 61.6
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 1.5e-163 580.1 457 61.3
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 4.4e-163 578.6 467 60.4
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 5.7e-163 578.2 459 61.2
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 2.8e-162 575.9 475 60.4
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.6e-160 570.1 469 58.8
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 5.0e-159 565.1 452 61.3
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 8.6e-159 564.3 470 58.9
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.2e-157 560.5 466 60.1
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 1.2e-155 553.9 460 59.1
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 2.0e-155 553.1 450 60.0
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.0e-155 553.1 455 59.1
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.4e-155 552.4 476 57.1
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 9.8e-155 550.8 459 56.2
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.7e-154 548.9 466 58.4
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 1.1e-153 547.4 457 55.6
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 5.4e-153 545.0 457 57.5
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.0e-152 543.1 464 58.2
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 5.9e-152 541.6 457 55.1
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 7.8e-152 541.2 458 58.7
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 5.0e-151 538.5 447 59.7
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 6.6e-151 538.1 452 59.3
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 5.6e-150 535.0 447 59.1
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 4.7e-149 531.9 457 55.6
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 6.2e-149 531.6 447 58.4
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 3.1e-148 529.3 468 56.8
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 1.9e-145 520.0 470 55.3
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 2.4e-145 519.6 475 54.5
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 2.0e-144 516.5 446 58.1
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 4.6e-144 515.4 449 58.8
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 2.3e-143 513.1 441 57.6
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 3.0e-143 512.7 449 57.2
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 6.6e-143 511.5 467 55.9
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 1.2e-141 507.3 464 55.4
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 2.1e-141 506.5 445 58.0
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 8.1e-141 504.6 462 57.4
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.8e-140 503.4 453 55.2
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 2.3e-140 503.1 448 57.1
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 5.2e-140 501.9 468 54.3
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.2e-139 500.7 465 54.2
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 4.4e-139 498.8 465 53.5
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 4.4e-139 498.8 454 55.1
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 5.8e-139 498.4 455 56.3
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 1.7e-138 496.9 448 56.7
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 2.2e-138 496.5 444 58.3
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 2.9e-138 496.1 454 54.8
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 3.7e-138 495.7 449 57.5
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 4.9e-138 495.4 450 56.9
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 8.3e-138 494.6 457 54.3
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.4e-137 493.8 465 53.1
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 3.2e-137 492.7 470 54.3
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 3.2e-137 492.7 485 52.8
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 4.1e-137 492.3 468 53.6
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 7.1e-137 491.5 474 54.4
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 9.2e-137 491.1 465 53.3
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.2e-136 490.7 465 53.3
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.0e-135 487.6 470 53.6
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 3.0e-135 486.1 473 54.3
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 8.6e-135 484.6 453 52.8
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 4.3e-134 482.3 448 52.2
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 2.3e-132 476.5 465 54.4
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 3.1e-132 476.1 476 52.9
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 3.4e-131 472.6 446 55.4
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 4.4e-131 472.2 452 52.9
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 9.9e-131 471.1 443 56.4
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 9.9e-131 471.1 443 56.4
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 2.2e-130 469.9 447 55.0
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 2.9e-130 469.5 457 53.6
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.9e-129 466.8 444 55.9
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 4.1e-129 465.7 467 52.0
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 9.2e-129 464.5 465 50.3
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 3.5e-128 462.6 443 55.3
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.9e-126 456.8 443 54.6
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 1.9e-126 456.8 460 49.1
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 7.3e-126 454.9 442 53.2
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 1.1e-124 451.1 445 54.4
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 8.9e-124 448.0 449 54.1
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 8.9e-124 448.0 456 51.5
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 4.4e-123 445.7 423 53.4
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 5.8e-123 445.3 454 50.9
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 2.2e-122 443.4 463 50.1
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 2.9e-122 443.0 459 49.9
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 3.0e-119 433.0 451 48.1
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 5.1e-119 432.2 463 49.9
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 4.0e-116 422.5 443 52.6
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 9.0e-116 421.4 429 49.4
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 2.2e-114 416.8 455 49.7
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 6.4e-114 415.2 491 47.5
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 2.5e-110 403.3 457 47.0
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.2e-107 394.4 445 45.8
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 2.1e-104 383.6 476 44.7
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 6.7e-103 378.6 409 47.2
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 4.8e-101 372.5 303 60.7
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 5.1e-95 352.4 446 45.1
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 8.2e-93 345.1 325 55.7
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.9e-86 323.9 452 41.2
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 6.5e-82 308.9 356 43.8
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 7.7e-75 285.4 315 49.5
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.0e-74 285.0 257 56.4
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 7.2e-73 278.9 278 53.6
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.6e-70 270.4 305 47.9
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 2.8e-69 266.9 494 35.2
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 8.5e-66 255.4 345 41.4
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.8e-55 221.1 446 34.1
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.2e-51 208.4 514 30.0
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 5.9e-51 206.1 231 49.4
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 2.7e-43 180.6 359 33.1
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 2.9e-37 160.6 150 53.3
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 9.5e-33 145.6 195 42.6
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 6.8e-31 139.4 127 48.8
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 8.9e-31 139.0 549 24.6
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 2.6e-30 137.5 114 57.0
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.4e-30 136.7 99 60.6
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 4.6e-27 126.7 116 52.6
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 4.0e-23 113.6 239 33.1
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 1.3e-21 108.6 104 50.0
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.9e-20 104.8 91 57.1
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 5.4e-20 103.2 89 62.9
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 6.6e-18 96.3 163 35.6
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 1.9e-17 94.7 84 61.9
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.6e-16 90.5 65 58.5
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 1.3e-13 82.0 88 46.6


User provided reference genes

Program Settings