Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc14.9 Carica papaya HOM05D005746 ORTHO05D007105 0.0e+00 1130.9 550 100.0
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 3.9e-166 589.0 448 64.3
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 2.9e-161 572.8 450 63.3
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 5.4e-160 568.5 450 63.8
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 1.6e-159 567.0 448 63.6
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 4.3e-157 558.9 447 61.5
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 1.6e-156 557.0 449 61.7
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 8.1e-156 554.7 442 61.5
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 3.4e-154 549.3 448 62.9
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 1.3e-153 547.4 451 61.9
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 8.4e-153 544.7 460 59.1
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 1.2e-151 540.8 453 61.6
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 1.2e-151 540.8 448 61.8
Lju41C18T12 Lonicera japonica HOM05D005746 ORTHO05D007105 1.6e-151 540.4 439 61.5
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 3.5e-151 539.3 446 59.6
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 7.8e-151 538.1 448 61.2
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 7.8e-151 538.1 458 59.4
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 7.8e-151 538.1 443 60.7
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 1.0e-150 537.7 456 61.2
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 1.3e-150 537.3 449 59.5
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 2.3e-150 536.6 437 60.0
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 6.6e-150 535.0 446 59.2
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 8.7e-150 534.6 441 60.8
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 7.3e-149 531.6 446 58.7
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 7.3e-149 531.6 437 61.1
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 2.1e-148 530.0 434 61.1
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 4.8e-148 528.9 439 59.2
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 2.8e-140 503.1 440 58.9
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 1.4e-139 500.7 437 57.2
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 1.8e-139 500.4 447 56.4
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 5.3e-139 498.8 448 56.2
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 6.9e-139 498.4 449 56.6
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.5e-138 497.3 448 56.0
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 2.0e-138 496.9 447 53.9
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 3.4e-138 496.1 448 56.0
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 5.8e-138 495.4 437 54.9
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 1.6e-135 487.3 453 54.1
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 1.3e-132 477.6 449 54.1
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 3.7e-132 476.1 451 53.2
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 8.2e-132 474.9 442 55.0
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 5.3e-131 472.2 451 53.0
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 1.3e-129 467.6 453 53.2
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 4.9e-129 465.7 460 51.7
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 4.2e-128 462.6 440 51.8
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 7.1e-128 461.8 440 55.2
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 1.2e-127 461.1 448 50.7
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 2.1e-127 460.3 435 52.4
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 4.6e-127 459.1 434 52.3
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 6.0e-127 458.8 415 55.2
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 1.0e-126 458.0 373 63.0
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 8.7e-126 454.9 455 49.5
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 1.1e-125 454.5 441 50.8
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 2.5e-125 453.4 450 51.1
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 1.6e-124 450.7 439 51.9
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 3.7e-124 449.5 435 50.6
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 3.7e-124 449.5 441 51.2
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 6.3e-124 448.7 439 51.0
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 8.2e-124 448.4 435 53.8
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 8.2e-124 448.4 446 50.7
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 8.2e-124 448.4 433 51.3
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 1.1e-123 448.0 442 52.7
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 6.9e-123 445.3 435 53.3
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 2.6e-122 443.4 446 49.6
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 4.5e-122 442.6 445 51.5
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 7.7e-122 441.8 445 51.5
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 2.9e-121 439.9 452 49.8
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 2.9e-121 439.9 442 50.0
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 8.5e-121 438.3 435 52.0
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 1.4e-120 437.6 443 51.2
BcaNung05131 Brassica carinata HOM05D005746 ORTHO05D007105 2.7e-119 433.3 446 51.8
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 2.7e-119 433.3 445 51.2
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 1.4e-118 431.0 445 52.1
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 1.4e-118 431.0 445 52.1
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 2.3e-118 430.3 446 50.7
CsaV3_3G041530 Cucumis sativus L. HOM05D005746 ORTHO05D007105 3.9e-118 429.5 442 51.6
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 5.1e-118 429.1 439 53.1
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 6.7e-118 428.7 442 51.4
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 8.8e-118 428.3 420 52.9
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 1.1e-117 427.9 438 50.7
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 7.4e-117 425.2 445 51.7
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 7.4e-117 425.2 445 51.7
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 4.8e-116 422.5 436 50.2
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 7.7e-114 415.2 442 50.0
vmacro05484 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.3e-113 414.5 402 53.5
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 5.1e-110 402.5 455 45.9
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 1.5e-109 401.0 441 47.4
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 7.4e-109 398.7 448 47.8
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 1.3e-108 397.9 440 48.0
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 1.0e-102 378.3 453 45.7
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 3.3e-101 373.2 473 44.2
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 1.7e-97 360.9 434 47.0
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 1.6e-95 354.4 451 43.5
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 5.0e-89 332.8 448 43.5
BcaC06g33650 Brassica carinata HOM05D005746 ORTHO05D007105 4.2e-88 329.7 312 54.5
Os08g0169700 Oryza sativa ssp. japonica HOM05D005746 ORTHO05D007105 1.0e-86 325.1 443 40.6
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 3.5e-82 310.1 453 40.4
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 5.2e-78 296.2 293 51.9
CDE09G0909 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 1.2e-77 295.0 421 40.9
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 4.0e-70 270.0 471 34.0
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 9.5e-56 222.2 449 31.8
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 2.0e-53 214.5 468 31.6
Migut.L00530 Erythranthe guttata HOM05D005746 ORTHO05D007105 2.6e-53 214.2 379 35.6
AagrBONN_evm.TU.Sc2ySwM_369.379 Anthoceros agrestis HOM05D005746 ORTHO05D007105 1.1e-46 192.2 534 29.4
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 2.7e-42 177.6 452 28.3
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 4.8e-39 166.8 389 29.0
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 9.0e-14 82.8 424 21.0
Thecc.08G172300 Theobroma cacao HOM05D005746 ORTHO05D007105 6.9e-06 56.6 54 51.9


User provided reference genes

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