Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 1.2e-86 323.2 173 100.0
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 5.2e-24 115.2 185 45.4
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 6.7e-24 114.8 157 47.8
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 2.0e-23 113.2 189 43.9
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 1.7e-22 110.2 186 43.5
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 1.1e-21 107.5 171 44.4
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 3.1e-21 105.9 156 48.7
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 4.1e-21 105.5 176 47.2
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 5.3e-21 105.1 193 44.0
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 5.3e-21 105.1 181 48.1
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 2.0e-20 103.2 161 45.3
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 1.3e-19 100.5 191 42.9
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.5e-18 97.1 150 50.0
Sed0004613 Sechium edule HOM05D007804 ORTHO05D009828 3.2e-18 95.9 156 43.6
Sed0005835 Sechium edule HOM05D007804 ORTHO05D009828 3.2e-18 95.9 156 43.6
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 4.0e-16 89.0 178 41.0
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 5.2e-16 88.6 163 41.7
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.5e-15 87.0 137 45.3
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 2.0e-15 86.7 165 41.2
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 3.4e-15 85.9 183 38.8
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 5.7e-15 85.1 151 40.4
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 9.8e-15 84.3 155 42.6
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.3e-14 84.0 158 42.4
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 1.3e-14 84.0 162 43.2
Rhsim08G0063700 Rhododendron simsii HOM05D007804 ORTHO05D009828 1.3e-14 84.0 152 41.4
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 1.7e-14 83.6 187 37.4
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 1.7e-14 83.6 157 40.8
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 2.2e-14 83.2 160 43.1
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.2e-14 83.2 160 43.1
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 2.8e-14 82.8 149 39.6
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 2.8e-14 82.8 160 41.2
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 3.7e-14 82.4 145 40.7
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 6.3e-14 81.6 185 35.7
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 6.3e-14 81.6 151 40.4
CSS0004616 Camellia sinensis var. sinensis HOM05D007804 ORTHO05D009828 8.3e-14 81.3 161 40.4
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 8.3e-14 81.3 171 38.6
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 8.3e-14 81.3 173 37.6
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.1e-13 80.9 159 40.9
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 1.8e-13 80.1 175 37.1
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 2.4e-13 79.7 171 37.4
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 2.4e-13 79.7 162 40.7
MSTRG.23968 Avicennia marina HOM05D007804 ORTHO05D009828 4.1e-13 79.0 149 40.3
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 4.1e-13 79.0 186 36.0
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 7.0e-13 78.2 172 37.8
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 9.1e-13 77.8 170 38.2
Thhalv10004896m.g Eutrema salsugineum HOM05D007804 ORTHO05D009828 1.2e-12 77.4 193 36.3
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 1.6e-12 77.0 186 37.6
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 1.6e-12 77.0 173 36.4
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 2.0e-12 76.6 174 36.8
THA.LOC104805425 Tarenaya hassleriana HOM05D007804 ORTHO05D009828 2.0e-12 76.6 215 34.9
Sp2g17190 Schrenkiella parvula HOM05D007804 ORTHO05D009828 2.7e-12 76.3 188 36.7
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 3.5e-12 75.9 189 36.0
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 4.5e-12 75.5 186 37.1
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 4.5e-12 75.5 162 38.3
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 5.9e-12 75.1 188 38.8
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 5.9e-12 75.1 168 38.7
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 5.9e-12 75.1 168 37.5
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 5.9e-12 75.1 200 37.5
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 5.9e-12 75.1 188 38.8
BolC7t44259H Brassica oleracea HOM05D000068 ORTHO05D009828 5.9e-12 75.1 180 35.6
C07p37470 Brassica napus HOM05D000068 ORTHO05D009828 7.7e-12 74.7 180 35.6
Carub.0005s0691 Capsella rubella HOM05D007804 ORTHO05D009828 1.0e-11 74.3 168 39.9
Lsat_1_v5_gn_4_180340 Lactuca sativa HOM05D007804 ORTHO05D009828 1.0e-11 74.3 152 39.5
AL5G18030 Arabidopsis lyrata HOM05D007804 ORTHO05D009828 1.7e-11 73.6 188 36.2
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 2.9e-11 72.8 174 35.6
Oeu017303.1 Olea europaea HOM05D007804 ORTHO05D009828 2.9e-11 72.8 148 42.6
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 2.9e-11 72.8 156 37.8
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 3.8e-11 72.4 192 35.9
Psat1g077160 Pisum sativum HOM05D007804 ORTHO05D009828 6.5e-11 71.6 191 30.9
unitig_899.g15501 Utricularia gibba HOM05D007804 ORTHO05D009828 8.5e-11 71.2 135 43.0
CANSAT64G2887 Cannabis sativa HOM05D007804 ORTHO05D009828 2.5e-10 69.7 172 39.0
SalBow1G7839 Salvia bowleyana HOM05D007804 ORTHO05D009828 2.5e-10 69.7 135 39.3
Lalb_Chr02g0159931 Lupinus albus HOM05D007804 ORTHO05D009828 3.2e-10 69.3 180 35.6
A02p35930 Brassica napus HOM05D007804 ORTHO05D009828 9.4e-10 67.8 189 37.0
DCAR_011178 Daucus carota HOM05D007804 ORTHO05D009828 9.4e-10 67.8 165 37.6
BraA02t08592Z Brassica rapa HOM05D007804 ORTHO05D009828 1.2e-09 67.4 189 37.0
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 1.6e-09 67.0 196 36.2
Oeu027756.1 Olea europaea HOM05D007804 ORTHO05D009828 1.6e-09 67.0 109 45.0
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 1.6e-09 67.0 182 34.6
Atru.chr8.2473 Acer truncatum HOM05D007804 ORTHO05D009828 4.7e-09 65.5 185 36.2
Nn3g17058 Nelumbo nucifera HOM05D007804 ORTHO05D009828 4.7e-09 65.5 171 35.1
Migut.H00872 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.8e-08 63.5 166 36.1
ECA232G1800 Erigeron canadensis HOM05D007804 ORTHO05D009828 2.3e-08 63.2 140 37.1
Nn4g22964 Nelumbo nucifera HOM05D007804 ORTHO05D009828 5.2e-08 62.0 163 37.4
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 5.2e-08 62.0 159 35.8
Hma1.2p1_0375F.1_g138910 Hydrangea macrophylla HOM05D007804 ORTHO05D009828 2.0e-07 60.1 148 36.5


User provided reference genes

Program Settings