Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 7.9e-107 390.6 188 100.0
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 1.1e-76 290.4 177 78.5
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 9.5e-76 287.3 175 77.1
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 9.5e-76 287.3 194 73.7
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 1.6e-75 286.6 178 78.7
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 2.1e-75 286.2 184 76.1
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 6.8e-74 281.2 178 77.5
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 1.2e-73 280.4 186 74.2
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 1.5e-73 280.0 173 78.6
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 2.0e-73 279.6 177 78.0
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 4.4e-73 278.5 188 72.9
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 4.4e-73 278.5 193 72.0
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 1.3e-72 276.9 183 72.1
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.3e-72 276.9 187 71.1
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 2.2e-72 276.2 192 70.8
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 2.2e-72 276.2 190 71.6
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 3.7e-72 275.4 184 72.3
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 8.3e-72 274.2 192 70.3
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 8.3e-72 274.2 189 71.4
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 8.3e-72 274.2 189 69.8
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 1.1e-71 273.9 195 68.7
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.4e-71 273.5 176 75.6
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 4.1e-71 271.9 191 71.7
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 7.0e-71 271.2 184 71.2
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 2.7e-70 269.2 188 72.3
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 4.6e-70 268.5 197 69.0
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.0e-69 267.3 167 75.4
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 2.3e-69 266.2 183 68.3
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 2.3e-69 266.2 188 69.7
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 5.0e-69 265.0 188 67.6
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 5.0e-69 265.0 182 67.0
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 1.9e-68 263.1 173 72.8
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 2.5e-68 262.7 189 68.8
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 2.5e-68 262.7 184 69.0
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 3.3e-68 262.3 174 71.3
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 5.6e-68 261.5 174 71.3
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 7.3e-68 261.2 154 81.2
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 7.3e-68 261.2 187 68.4
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 9.5e-68 260.8 176 71.0
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 9.5e-68 260.8 193 67.9
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 1.2e-67 260.4 183 67.8
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 2.1e-67 259.6 186 67.2
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 2.1e-67 259.6 167 73.1
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 3.6e-67 258.8 189 69.8
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.4e-66 256.9 190 65.3
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 3.1e-66 255.8 189 67.2
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 3.1e-66 255.8 182 64.8
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 4.0e-66 255.4 155 79.4
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 4.0e-66 255.4 172 70.9
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 5.2e-66 255.0 182 64.8
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 8.9e-66 254.2 157 76.4
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 1.5e-65 253.4 172 71.5
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 1.5e-65 253.4 175 69.7
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 4.4e-65 251.9 196 66.3
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 4.4e-65 251.9 139 84.2
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 4.4e-65 251.9 202 63.4
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 7.5e-65 251.1 187 65.8
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 9.8e-65 250.8 178 70.2
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 9.8e-65 250.8 179 70.4
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 1.3e-64 250.4 152 77.0
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 2.2e-64 249.6 172 70.9
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 2.2e-64 249.6 172 70.9
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 2.2e-64 249.6 172 70.9
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 2.2e-64 249.6 172 70.9
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 3.7e-64 248.8 191 66.5
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 8.3e-64 247.7 205 63.4
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 2.4e-63 246.1 180 67.2
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 3.2e-63 245.7 186 64.0
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 5.4e-63 245.0 194 65.5
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 1.6e-62 243.4 164 73.8
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 4.6e-62 241.9 138 81.2
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 1.0e-61 240.7 169 65.7
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 1.3e-61 240.4 162 71.6
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 1.3e-61 240.4 168 65.5
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 2.3e-61 239.6 187 61.5
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 3.0e-61 239.2 137 78.8
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.1e-60 237.3 214 58.9
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 7.3e-60 234.6 179 65.9
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 2.8e-59 232.6 161 70.2
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 3.6e-59 232.3 178 61.8
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 6.2e-59 231.5 211 57.3
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 1.2e-57 227.3 169 65.1
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.2e-57 227.3 162 66.7
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.2e-57 227.3 169 65.1
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 1.2e-57 227.3 169 63.3
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.3e-56 221.1 182 60.4
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.2e-54 217.2 191 57.1
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.6e-54 216.9 136 71.3
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 3.0e-53 212.6 192 57.8
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 6.6e-53 211.5 152 68.4
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.5e-52 209.5 174 63.2
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 7.8e-46 188.0 113 71.7
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 3.9e-45 185.7 202 53.0
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 1.1e-44 184.1 185 51.9
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 4.7e-43 178.7 139 64.0
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.4e-42 177.2 153 58.2
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 4.2e-39 165.6 190 48.9
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 2.1e-38 163.3 169 47.9
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 1.8e-34 150.2 152 50.0
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 2.6e-33 146.4 84 76.2
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.9e-31 140.2 159 45.3
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 3.3e-28 129.4 67 82.1
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 8.4e-24 114.8 84 61.9
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 9.3e-23 111.3 101 62.4
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 6.2e-19 98.6 122 49.2
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 6.9e-18 95.1 87 59.8
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.6e-17 93.2 53 73.6
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 1.7e-16 90.5 67 59.7
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 9.3e-15 84.7 102 48.0
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 3.9e-13 79.3 62 58.1
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.5e-09 67.4 37 70.3
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 6.1e-06 55.5 94 34.0


User provided reference genes

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