Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 3.1e-265 917.9 472 100.0
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 4.7e-152 542.0 474 61.4
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 2.3e-151 539.7 466 62.0
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 2.0e-150 536.6 455 62.4
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 3.3e-150 535.8 484 60.7
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 2.8e-149 532.7 445 64.3
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 6.3e-149 531.6 469 62.0
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 1.1e-148 530.8 456 62.1
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 4.1e-148 528.9 447 62.2
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 4.1e-148 528.9 453 63.6
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.2e-147 527.3 405 68.1
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 2.5e-145 519.6 446 63.0
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 3.2e-145 519.2 477 61.2
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 4.2e-145 518.8 411 66.2
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 5.5e-145 518.5 446 62.8
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 7.2e-145 518.1 424 65.3
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 1.2e-144 517.3 470 59.6
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 2.1e-144 516.5 474 60.8
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 2.7e-144 516.2 409 66.7
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 3.6e-144 515.8 446 62.6
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 6.1e-144 515.0 478 58.2
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 6.1e-144 515.0 476 59.7
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 1.4e-143 513.8 424 63.9
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 2.3e-143 513.1 470 59.8
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 5.2e-143 511.9 403 65.3
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 6.7e-143 511.5 470 59.4
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 6.7e-143 511.5 477 57.4
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.0e-142 510.0 451 61.0
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 2.0e-142 510.0 474 59.9
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 5.7e-142 508.4 471 58.6
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 1.7e-141 506.9 475 59.8
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 1.1e-140 504.2 424 63.4
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 1.8e-140 503.4 446 59.9
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 3.1e-140 502.7 473 58.6
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 5.3e-140 501.9 448 60.9
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 2.0e-139 500.0 460 58.5
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 4.5e-139 498.8 413 62.7
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 4.5e-139 498.8 477 58.9
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 5.9e-139 498.4 418 64.1
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 1.0e-138 497.7 415 63.4
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 1.7e-138 496.9 430 61.4
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 2.2e-138 496.5 445 59.8
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 2.2e-138 496.5 422 63.7
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 2.9e-138 496.1 425 59.5
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 3.8e-138 495.7 413 62.0
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 5.0e-138 495.4 472 56.1
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 5.0e-138 495.4 414 62.1
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 6.5e-138 495.0 472 57.2
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 8.5e-138 494.6 407 63.9
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 8.5e-138 494.6 472 57.0
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 3.2e-137 492.7 447 58.6
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 9.4e-137 491.1 424 62.3
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 1.2e-136 490.7 427 59.3
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 1.6e-136 490.3 390 65.4
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 3.6e-136 489.2 413 62.0
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 1.8e-135 486.9 417 61.6
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 3.0e-135 486.1 445 58.2
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 4.0e-135 485.7 400 63.8
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 8.8e-135 484.6 477 58.1
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 2.0e-134 483.4 424 60.6
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 2.6e-134 483.0 445 58.0
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 5.7e-134 481.9 425 60.7
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 1.3e-133 480.7 456 58.8
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 1.7e-133 480.3 463 56.4
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 2.8e-133 479.6 407 59.7
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 2.8e-133 479.6 400 62.0
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 1.1e-132 477.6 401 62.3
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 3.1e-132 476.1 398 63.1
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 4.1e-132 475.7 476 55.5
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 7.7e-131 471.5 451 56.1
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 1.3e-130 470.7 400 61.2
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 8.6e-130 468.0 416 59.1
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 3.3e-129 466.1 460 56.3
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 4.2e-129 465.7 451 57.2
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 2.1e-128 463.4 470 54.0
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 8.0e-128 461.5 451 56.5
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.8e-127 460.3 407 60.9
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 1.2e-126 457.6 409 59.4
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 2.6e-126 456.4 401 58.1
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 3.4e-126 456.1 392 60.7
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 4.9e-125 452.2 426 58.9
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 8.3e-125 451.4 410 58.8
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 9.2e-124 448.0 476 54.4
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 2.9e-122 443.0 360 64.2
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 3.8e-122 442.6 398 59.8
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 7.3e-121 438.3 399 59.4
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 8.9e-119 431.4 271 77.1
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.9e-116 423.7 409 56.7
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 3.5e-115 419.5 372 59.7
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 7.8e-115 418.3 410 56.1
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 1.7e-114 417.2 367 59.9
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 5.6e-113 412.1 350 63.1
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 4.9e-109 399.1 362 58.6
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 5.1e-98 362.5 400 49.0
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 6.6e-98 362.1 420 47.1
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 7.3e-97 358.6 404 48.3
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 1.8e-87 327.4 405 44.4
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 1.7e-85 320.9 262 63.0
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 4.9e-85 319.3 295 56.9
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 3.9e-82 309.7 484 44.0
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 2.9e-77 293.5 234 66.2
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 9.3e-76 288.5 304 54.6
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 4.3e-73 279.6 412 40.3
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 1.8e-66 257.7 183 67.2
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 3.3e-65 253.4 409 39.1
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 2.0e-62 244.2 233 56.7
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 3.5e-59 233.4 253 51.8
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.8e-58 231.1 458 33.8
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.8e-58 231.1 458 33.8
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 9.0e-55 218.8 459 32.7
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 3.3e-49 200.3 339 38.1
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 3.4e-46 190.3 578 27.2
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 8.5e-45 185.7 178 58.4
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 2.8e-40 170.6 405 32.3
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 7.7e-38 162.5 193 47.7
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 7.4e-33 146.0 144 52.1
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 1.9e-20 104.8 68 73.5
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 8.8e-18 95.9 66 68.2
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 2.6e-17 94.4 66 69.7
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 1.7e-16 91.7 71 62.0
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 8.6e-13 79.3 61 52.5
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.8e-11 74.3 97 43.3
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.6e-11 73.9 118 39.0
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 1.2e-09 68.9 53 67.9
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.2e-08 64.7 121 32.2
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 6.3e-08 63.2 124 33.1
MD15G1234700 Malus domestica HOM05D006074 ORTHO05D248841 5.4e-07 60.1 61 50.8


User provided reference genes

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