Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 3.5e-239 831.2 427 100.0
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 8.2e-140 501.1 395 70.6
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 2.7e-135 486.1 393 71.2
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 2.6e-133 479.6 401 69.8
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 5.7e-133 478.4 401 67.6
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 1.7e-132 476.9 390 68.7
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 1.8e-131 473.4 398 69.6
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 1.6e-130 470.3 389 68.6
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 2.0e-130 469.9 394 66.5
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 4.5e-130 468.8 408 68.6
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 4.5e-130 468.8 384 69.5
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 7.7e-130 468.0 389 68.9
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 5.0e-129 465.3 387 67.4
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 1.1e-128 464.2 414 65.2
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 5.5e-128 461.8 396 66.9
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 1.2e-127 460.7 401 63.3
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 6.8e-126 454.9 393 65.9
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 8.9e-126 454.5 389 66.6
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 3.4e-125 452.6 395 67.1
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 7.5e-125 451.4 402 65.4
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 2.2e-124 449.9 381 67.5
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 2.2e-124 449.9 388 66.5
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 3.7e-124 449.1 385 66.8
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 8.3e-124 448.0 404 65.6
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 8.3e-124 448.0 401 62.3
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 1.8e-123 446.8 395 65.6
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 2.7e-122 443.0 395 66.3
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 1.3e-121 440.7 385 66.8
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 1.3e-121 440.7 385 66.8
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 2.3e-121 439.9 385 66.5
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 6.6e-121 438.3 384 65.6
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 2.5e-120 436.4 396 64.6
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 1.6e-119 433.7 404 64.6
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 2.1e-119 433.3 396 67.2
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 2.8e-119 433.0 381 66.4
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 3.6e-119 432.6 404 64.1
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 4.7e-119 432.2 387 65.1
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.0e-118 431.0 396 65.2
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 1.8e-118 430.3 395 64.3
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 2.3e-118 429.9 399 62.4
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 4.0e-118 429.1 418 62.9
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 4.0e-118 429.1 442 58.6
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 9.8e-117 424.5 382 65.7
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 1.3e-116 424.1 389 63.8
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 2.9e-116 422.9 418 62.0
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 4.9e-116 422.2 436 58.9
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 8.3e-116 421.4 391 64.7
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 8.3e-116 421.4 391 65.0
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 8.3e-116 421.4 391 65.0
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 1.4e-115 420.6 385 62.3
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 3.2e-115 419.5 388 63.1
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 7.0e-115 418.3 438 56.8
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 7.0e-115 418.3 438 56.8
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 1.2e-114 417.5 389 62.2
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 2.7e-114 416.4 441 56.7
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 4.6e-114 415.6 399 60.4
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 6.0e-114 415.2 446 58.5
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 3.9e-113 412.5 432 58.3
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 5.0e-113 412.1 391 61.9
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 6.6e-113 411.8 380 63.9
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.1e-112 411.0 412 61.9
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 1.9e-112 410.2 442 53.8
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 1.9e-112 410.2 442 53.8
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 3.3e-112 409.5 391 60.1
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 9.5e-112 407.9 392 61.2
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 1.2e-111 407.5 382 61.8
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 3.6e-111 406.0 393 60.8
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 1.5e-109 400.6 420 57.6
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 4.4e-109 399.1 383 60.3
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 3.7e-108 396.0 386 60.4
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 1.1e-107 394.4 406 57.4
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 4.1e-107 392.5 440 53.9
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 5.4e-107 392.1 395 60.5
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 1.2e-106 391.0 392 57.7
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 2.1e-106 390.2 403 58.6
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 2.7e-106 389.8 389 58.9
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 6.0e-106 388.7 376 62.0
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 4.3e-104 382.5 381 59.6
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 5.6e-104 382.1 425 55.1
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 2.1e-103 380.2 367 59.9
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 4.0e-102 375.9 394 57.1
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 5.2e-102 375.6 412 52.9
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 9.9e-101 371.3 434 55.3
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 8.3e-100 368.2 431 54.8
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 1.4e-99 367.5 342 64.0
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 2.4e-99 366.7 389 56.3
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 7.1e-99 365.2 334 62.9
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 7.8e-98 361.7 430 53.5
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 1.1e-96 357.8 387 53.2
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 1.5e-96 357.5 396 54.8
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 1.5e-96 357.5 370 57.0
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 4.3e-96 355.9 451 52.1
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 1.4e-86 324.3 359 55.2
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 3.5e-82 309.7 501 43.1
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 1.0e-81 308.1 370 53.0
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 1.5e-80 304.3 224 70.5
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 2.0e-77 293.9 311 59.5
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 4.2e-75 286.2 275 62.2
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 4.2e-75 286.2 275 62.2
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 1.0e-73 281.6 525 41.0
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 3.7e-71 273.1 204 69.1
MBI19_g00631_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 7.9e-66 255.4 179 72.6
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 1.1e-62 245.0 401 43.4
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 7.1e-59 232.3 252 59.5
MD09G1066300 Malus domestica HOM05D006007 ORTHO05D007518 2.5e-56 223.8 135 85.2
Sc10g0004660 Simmondsia chinensis HOM05D006007 ORTHO05D007518 1.0e-52 211.8 147 75.5
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 9.4e-51 205.3 362 38.7
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 9.4e-51 205.3 232 53.0
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 3.0e-49 200.3 224 55.8
CDE05G1269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 1.5e-40 171.4 130 67.7
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 2.4e-38 164.1 137 62.0
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 5.3e-38 162.9 241 49.4
BraA09t36042Z Brassica rapa HOM05D006007 ORTHO05D007518 1.2e-37 161.8 110 75.5
Os03g0213900 Oryza sativa ssp. japonica HOM05D006007 ORTHO05D007518 2.2e-36 157.5 102 76.5
SEGI_00365 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 2.2e-36 157.5 129 62.8
A09p04060 Brassica napus HOM05D006007 ORTHO05D010543 2.5e-35 154.1 110 73.6
Hma1.2p1_0481F.1_g162130 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 7.2e-27 125.9 76 81.6
Cre09.g389900 Chlamydomonas reinhardtii HOM05D006007 ORTHO05D007518 3.7e-23 113.6 272 31.2
SHI25684 Sapria himalayana HOM05D006007 ORTHO05D007518 1.1e-22 112.1 88 61.4
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 2.4e-22 110.9 229 39.7
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 1.2e-21 108.6 165 46.7
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 8.0e-18 95.9 141 48.2
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 5.2e-17 93.2 70 70.0
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 4.4e-16 90.1 90 58.9
CARHR153030 Cardamine hirsuta HOM05D006007 ORTHO05D007518 7.7e-13 79.3 65 63.1
arahy.Tifrunner.gnm1.ann1.L6ML9N Arachis hypogaea HOM05D000032 ORTHO05D005217 3.4e-08 63.9 123 35.0
arahy.Tifrunner.gnm1.ann1.SNDG00 Arachis hypogaea HOM05D000032 ORTHO05D005217 6.3e-07 59.7 123 34.1
SMO197G0006 Selaginella moellendorffii HOM05D000032 ORTHO05D005217 9.2e-06 55.8 114 31.6


User provided reference genes

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