Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc14.155 Carica papaya HOM05D000045 ORTHO05D022241 1.1e-93 346.7 178 100.0
COL.COLO4_03730 Corchorus olitorius HOM05D000045 ORTHO05D000067 7.1e-53 211.1 166 65.1
GSVIVG01011502001 Vitis vinifera HOM05D000045 ORTHO05D000067 2.3e-51 206.1 165 63.6
Thecc.04G092000 Theobroma cacao HOM05D000045 ORTHO05D000067 1.8e-48 196.4 165 63.6
Cfa010167 Carpinus fangiana HOM05D000045 ORTHO05D022241 2.1e-41 172.9 159 61.6
CiPaw.04G057700 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.5e-37 158.3 165 57.6
Aqoxy3G03573 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.3e-33 147.1 165 49.1
Duzib264G0092 Durio zibethinus HOM05D000045 ORTHO05D000067 2.8e-33 146.0 131 58.8
Dinv11479 Davidia involucrata HOM05D000045 ORTHO05D022241 1.7e-30 136.7 148 52.7
QL02p039940 Quercus lobata HOM05D000045 ORTHO05D000067 8.5e-30 134.4 113 63.7
PSO013G0365 Papaver somniferum HOM05D000045 ORTHO05D000067 2.3e-27 126.3 163 45.4
PSO063G5815 Papaver somniferum HOM05D000045 ORTHO05D000067 6.7e-27 124.8 163 44.8
Nn3g17392 Nelumbo nucifera HOM05D000045 ORTHO05D000067 1.1e-26 124.0 139 51.1
Gohir.A11G072000 Gossypium hirsutum HOM05D000045 ORTHO05D000067 4.5e-23 112.1 93 60.2
Gohir.D11G076000 Gossypium hirsutum HOM05D000045 ORTHO05D000067 7.7e-23 111.3 93 60.2
Gorai.007G081700 Gossypium raimondii HOM05D000045 ORTHO05D000067 7.7e-23 111.3 93 60.2
Prupe.3G257900 Prunus persica HOM05D000045 ORTHO05D000067 2.2e-22 109.8 75 68.0
TWI34G0296 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.8e-22 109.0 83 65.1
MD00G1156400 Malus domestica HOM05D000045 ORTHO05D000067 5.5e-21 105.1 75 65.3
CANSAT64G1231 Cannabis sativa HOM05D000045 ORTHO05D000067 2.1e-20 103.2 93 59.1
Atru.chr8.405 Acer truncatum HOM05D000045 ORTHO05D000067 4.5e-15 85.5 88 58.0
Haze_14463 Corylus avellana HOM05D000944 ORTHO05D022241 8.0e-12 74.7 76 60.5
MBI18_g14308_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000067 1.3e-09 67.4 153 34.0
CSS0018338 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.1e-08 64.3 98 37.8
MBI04_g12221_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000067 3.1e-08 62.8 82 42.7
MBI11_g24615_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000067 4.1e-08 62.4 157 29.9
GSVIVG01023847001 Vitis vinifera HOM05D000045 ORTHO05D000067 5.3e-08 62.0 90 40.0
Manes.15G114400 Manihot esculenta HOM05D000045 ORTHO05D000067 9.1e-08 61.2 74 44.6
Potri.004G209100 Populus trichocarpa HOM05D000045 ORTHO05D000067 1.2e-07 60.8 113 36.3
Aqoxy6G03033 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.5e-07 59.3 113 31.0
Nn6g31599 Nelumbo nucifera HOM05D000045 ORTHO05D000067 3.5e-07 59.3 139 33.1
PGR119G0427 Punica granatum HOM05D000045 ORTHO05D000067 4.5e-07 58.9 98 39.8
Thecc.02G148900 Theobroma cacao HOM05D000045 ORTHO05D000067 4.5e-07 58.9 98 36.7
Atru.chr13.36 Acer truncatum HOM05D000045 ORTHO05D000067 1.0e-06 57.8 84 40.5
Atru.chr5.3588 Acer truncatum HOM05D000045 ORTHO05D000067 1.0e-06 57.8 139 30.2
Prupe.8G182800 Prunus persica HOM05D000045 ORTHO05D000067 1.3e-06 57.4 139 28.8
CDE05G1823 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 1.7e-06 57.0 110 33.6
QL02p015986 Quercus lobata HOM05D000045 ORTHO05D000067 1.7e-06 57.0 73 43.8
Cpa.g.sc60.6 Carica papaya HOM05D000045 ORTHO05D000067 2.2e-06 56.6 74 43.2
Rhsim11G0199200 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.2e-06 56.6 99 34.3
TWI75G0414 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.2e-06 56.6 113 32.7
FvH4_2g17132 Fragaria vesca HOM05D000045 ORTHO05D000067 2.9e-06 56.2 139 30.9
Sabra04G0141000 Salix brachista HOM05D000045 ORTHO05D000067 2.9e-06 56.2 113 33.6
Nitab4.5_0000235g0050 Nicotiana tabacum HOM05D000045 ORTHO05D000067 3.8e-06 55.8 72 41.7
QL11p056930 Quercus lobata HOM05D000045 ORTHO05D000067 3.8e-06 55.8 163 30.7
TAR376G0491 Trochodendron aralioides HOM05D000045 ORTHO05D000067 3.8e-06 55.8 113 33.6
CDE04G2621 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 5.0e-06 55.5 91 31.9
CDE08G0382 Ceratophyllum demersum HOM05D000045 ORTHO05D022241 5.0e-06 55.5 91 35.2
MD06G1002400 Malus domestica HOM05D000045 ORTHO05D000067 6.5e-06 55.1 86 33.7
Sabra17G0080100 Salix brachista HOM05D000045 ORTHO05D000067 6.5e-06 55.1 85 42.4
CSS0016715 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.5e-06 54.7 73 43.8
CiPaw.09G108100 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.5e-06 54.7 139 28.8
MBI04_g12222_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000067 8.5e-06 54.7 72 41.7
RcHm_v2.0_Chr6g0281571 Rosa chinensis HOM05D000045 ORTHO05D000067 8.5e-06 54.7 139 30.2


User provided reference genes

Program Settings