Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc139.7 Carica papaya HOM05D006425 ORTHO05D007312 0.0e+00 2169.4 1092 100.0
Atru.chr5.713 Acer truncatum HOM05D006425 ORTHO05D007312 0.0e+00 1709.1 1093 77.9
Cfa003773 Carpinus fangiana HOM05D006425 ORTHO05D007312 0.0e+00 1696.8 1094 77.8
TWI23G0835 Tripterygium wilfordii HOM05D006425 ORTHO05D007312 0.0e+00 1688.7 1088 78.0
Potri.014G101400 Populus trichocarpa HOM05D006425 ORTHO05D007312 0.0e+00 1682.2 1092 75.9
QL08p046032 Quercus lobata HOM05D006425 ORTHO05D007312 0.0e+00 1671.0 1076 77.5
Haze_15687 Corylus avellana HOM05D006425 ORTHO05D007312 0.0e+00 1669.8 1114 75.6
Manes.01G243600 Manihot esculenta HOM05D006425 ORTHO05D007312 0.0e+00 1669.8 1090 78.1
Thecc.01G338700 Theobroma cacao HOM05D006425 ORTHO05D007312 0.0e+00 1666.4 1086 77.2
MD07G1153800 Malus domestica HOM05D006425 ORTHO05D007312 0.0e+00 1664.4 1084 75.8
Sabra14G0074600 Salix brachista HOM05D006425 ORTHO05D007312 0.0e+00 1658.3 1098 74.4
Duzib138G0057 Durio zibethinus HOM05D006425 ORTHO05D007312 0.0e+00 1656.7 1086 76.2
CSS0033565 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 0.0e+00 1642.9 1083 76.1
Lj7C496T17 Lonicera japonica HOM05D006425 ORTHO05D007312 0.0e+00 1641.7 1093 76.4
RcHm_v2.0_Chr1g0360431 Rosa chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1639.0 1086 75.5
Dinv34229 Davidia involucrata HOM05D006425 ORTHO05D007312 0.0e+00 1635.9 1065 78.0
THA.LOC104815884 Tarenaya hassleriana HOM05D006425 ORTHO05D007312 0.0e+00 1632.5 1085 75.7
FvH4_7g17030 Fragaria vesca HOM05D006425 ORTHO05D007312 0.0e+00 1632.1 1080 74.9
COL.COLO4_06242 Corchorus olitorius HOM05D006425 ORTHO05D007312 0.0e+00 1622.8 1105 74.8
GSVIVG01027188001 Vitis vinifera HOM05D006425 ORTHO05D007312 0.0e+00 1620.9 1085 75.9
Eucgr.E03445 Eucalyptus grandis HOM05D006425 ORTHO05D007312 0.0e+00 1617.1 1078 75.1
Thhalv10006637m.g Eutrema salsugineum HOM05D006425 ORTHO05D007312 0.0e+00 1616.3 1081 75.2
TAR629G2477 Trochodendron aralioides HOM05D006425 ORTHO05D007312 0.0e+00 1609.7 1074 75.5
Gorai.008G127000 Gossypium raimondii HOM05D006425 ORTHO05D007312 0.0e+00 1608.6 1075 75.3
Gohir.D12G117200 Gossypium hirsutum HOM05D006425 ORTHO05D007312 0.0e+00 1608.2 1075 75.3
CsaV3_3G007870 Cucumis sativus L. HOM05D006425 ORTHO05D007312 0.0e+00 1607.8 1087 72.8
Phvul.006G115200 Phaseolus vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1602.0 1076 73.4
VMungo0540G0548 Vigna mungo HOM05D006425 ORTHO05D007312 0.0e+00 1601.3 1083 73.1
arahy.Tifrunner.gnm1.ann1.V6VX4F Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1599.7 1110 73.0
AL1G11260 Arabidopsis lyrata HOM05D006425 ORTHO05D007312 0.0e+00 1599.3 1076 74.6
Sp1g01070 Schrenkiella parvula HOM05D006425 ORTHO05D007312 0.0e+00 1598.6 1089 73.6
TPR.G4756 Trifolium pratense HOM05D006425 ORTHO05D007312 0.0e+00 1594.3 1090 73.4
Glyma.19G257700 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1592.8 1086 73.2
FAN10G2644 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1592.0 1069 74.4
CARHR001250 Cardamine hirsuta HOM05D006425 ORTHO05D007312 0.0e+00 1591.6 1084 74.5
Rhsim07G0002300 Rhododendron simsii HOM05D006425 ORTHO05D007312 0.0e+00 1589.3 1076 76.1
FAN10G4300 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1588.5 1079 73.9
FAN06G4481 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1588.2 1072 74.3
Ca_09524_v3 Cicer arietinum L. HOM05D006425 ORTHO05D007312 0.0e+00 1587.4 1086 73.7
Lj1g0017915 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1584.7 1081 74.0
Sed0010112 Sechium edule HOM05D006425 ORTHO05D007312 0.0e+00 1582.0 1083 71.9
BraA09t42237Z Brassica rapa HOM05D006425 ORTHO05D007312 0.0e+00 1580.5 1088 73.0
FAN03G0670 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1576.2 1070 73.8
Glyma.03G259000 Glycine max HOM05D006425 ORTHO05D007312 0.0e+00 1575.8 1076 72.5
Carub.0008s1137 Capsella rubella HOM05D006425 ORTHO05D007312 0.0e+00 1575.1 1086 73.8
Oeu007875.1 Olea europaea HOM05D006425 ORTHO05D007312 0.0e+00 1575.1 1091 73.1
Psat3g001600 Pisum sativum HOM05D006425 ORTHO05D007312 0.0e+00 1574.7 1086 73.5
A09p69000 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1571.6 1090 72.4
FAN06G3842 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1571.2 1070 73.7
Nn1g00347 Nelumbo nucifera HOM05D006425 ORTHO05D007312 0.0e+00 1570.1 1075 73.4
PGR102G0287 Punica granatum HOM05D006425 ORTHO05D007312 0.0e+00 1569.7 1082 72.2
FAN01G0442 Fragaria x ananassa HOM05D006425 ORTHO05D007312 0.0e+00 1568.9 1070 73.6
BolC8t52871H Brassica oleracea HOM05D006425 ORTHO05D007312 0.0e+00 1562.7 1088 72.1
C08p53570 Brassica napus HOM05D006425 ORTHO05D007312 0.0e+00 1562.4 1090 71.8
Lalb_Chr04g0261441 Lupinus albus HOM05D006425 ORTHO05D007312 0.0e+00 1562.0 1086 72.1
Medtr7g117870 Medicago truncatula HOM05D006425 ORTHO05D007312 0.0e+00 1560.4 1087 73.0
CAN.G1415.13 Capsicum annuum HOM05D006425 ORTHO05D007312 0.0e+00 1558.9 1087 72.8
arahy.Tifrunner.gnm1.ann1.GF075D Arachis hypogaea HOM05D006425 ORTHO05D007312 0.0e+00 1553.9 1117 71.3
PGSC0003DMG400000238 Solanum tuberosum HOM05D006425 ORTHO05D007312 0.0e+00 1550.8 1087 72.1
ECA236G2333 Erigeron canadensis HOM05D006425 ORTHO05D007312 0.0e+00 1546.9 1072 73.3
MBI12_g20265_MAGBIO Magnolia biondii HOM05D006425 ORTHO05D007312 0.0e+00 1545.8 1092 72.6
Solyc01g096160.4 Solanum lycopersicum HOM05D006425 ORTHO05D007312 0.0e+00 1540.0 1087 72.1
Migut.B01889 Erythranthe guttata HOM05D006425 ORTHO05D007312 0.0e+00 1537.3 1086 71.6
AUR62022731 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1536.2 1094 71.6
PSO782G0220 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1535.0 1083 72.0
PSO063G5968 Papaver somniferum HOM05D006425 ORTHO05D007312 0.0e+00 1527.3 1084 72.1
Sc13g0006630 Simmondsia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1524.6 1081 70.4
Aa31LG1G10590 Aethionema arabicum HOM05D006425 ORTHO05D007312 0.0e+00 1523.8 1081 72.4
HanXRQChr04g0120411 Helianthus annuus HOM05D006425 ORTHO05D007312 0.0e+00 1520.0 1080 71.2
Ah.05g179300 Amaranthus hybridus HOM05D006425 ORTHO05D007312 0.0e+00 1519.6 1074 72.6
SGA_v2.0_scaffold22G09958 Striga asiatica HOM05D006425 ORTHO05D007312 0.0e+00 1515.0 1087 70.6
Aqoxy5G04315 Aquilegia oxysepala HOM05D006425 ORTHO05D007312 0.0e+00 1509.6 1084 69.0
ClCG05G000660 Citrullus lanatus HOM05D006425 ORTHO05D007312 0.0e+00 1506.1 1069 71.9
MELO3C006005.2 Cucumis melo HOM05D006425 ORTHO05D007312 0.0e+00 1505.7 1080 70.1
Hund27175 Selenicereus undatus HOM05D006425 ORTHO05D007312 0.0e+00 1500.3 1078 71.2
Ciclev10018702m.g Citrus clementina HOM05D006425 ORTHO05D007312 0.0e+00 1499.6 987 77.3
AUR62004524 Chenopodium quinoa HOM05D006425 ORTHO05D007312 0.0e+00 1496.9 1093 70.4
Cc02_g39660 Coffea canephora HOM05D006425 ORTHO05D007312 0.0e+00 1490.7 1084 68.5
Peaxi162Scf00345g00024 Petunia axillaris HOM05D006425 ORTHO05D007312 0.0e+00 1483.0 1078 71.0
DCAR_006981 Daucus carota HOM05D006425 ORTHO05D007312 0.0e+00 1475.3 1068 71.2
Nitab4.5_0006770g0030 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1471.1 1085 70.8
vmacro04289 Vaccinium macrocarpon HOM05D006425 ORTHO05D007312 0.0e+00 1464.5 1221 64.1
SalBow3G3533 Salvia bowleyana HOM05D006425 ORTHO05D007312 0.0e+00 1433.7 1144 65.7
AT1G01220 Arabidopsis thaliana HOM05D006425 ORTHO05D007312 0.0e+00 1428.7 944 75.3
HPP92_015094 Vanilla planifolia HOM05D006425 ORTHO05D007312 0.0e+00 1411.0 1087 65.7
ATR0757G210 Amborella trichopoda HOM05D006425 ORTHO05D007312 0.0e+00 1406.0 1091 66.0
Lsat_1_v5_gn_7_2761 Lactuca sativa HOM05D006425 ORTHO05D007312 0.0e+00 1385.5 1095 66.8
Lj1g0006712 Lotus japonicus HOM05D006425 ORTHO05D007312 0.0e+00 1365.5 961 71.9
Os03g0115100 Oryza sativa ssp. japonica HOM05D006425 ORTHO05D007312 0.0e+00 1347.4 1087 62.3
SHI13064 Sapria himalayana HOM05D006425 ORTHO05D007312 0.0e+00 1326.6 1206 58.1
Zm00001eb001000 Zea mays HOM05D006425 ORTHO05D007312 0.0e+00 1322.0 1093 61.5
unitig_899.g14792 Utricularia gibba HOM05D006425 ORTHO05D007312 0.0e+00 1205.3 1075 58.6
Nitab4.5_0000307g0050 Nicotiana tabacum HOM05D006425 ORTHO05D007312 0.0e+00 1200.7 976 66.4
CiPaw.02G042200 Carya illinoinensis HOM05D006425 ORTHO05D007312 0.0e+00 1192.9 760 77.5
Prupe.2G192700 Prunus persica HOM05D006425 ORTHO05D007312 0.0e+00 1183.3 758 76.3
Actinidia07981 Actinidia chinensis HOM05D006425 ORTHO05D007312 0.0e+00 1156.0 1085 59.8
EL10Ac1g00230 Beta vulgaris HOM05D006425 ORTHO05D007312 0.0e+00 1094.0 754 73.1
Gohir.A12G113700 Gossypium hirsutum HOM05D006425 ORTHO05D007312 9.6e-310 1067.0 718 75.5
Mapoly0065s0064 Marchantia polymorpha HOM05D006425 ORTHO05D007312 5.7e-286 988.0 1088 48.5
Actinidia20260 Actinidia chinensis HOM05D006425 ORTHO05D007312 2.9e-274 949.1 1017 55.7
Pp3c27_4880 Physcomitrium patens HOM05D006425 ORTHO05D007312 7.0e-268 927.9 1085 48.2
Sopen01g039900 Solanum pennellii HOM05D006425 ORTHO05D007312 8.3e-253 877.9 624 71.3
SEGI_19319 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 3.1e-239 832.8 717 60.5
BcaC07g42431 Brassica carinata HOM05D006425 ORTHO05D007312 2.2e-229 800.0 539 74.8
AagrBONN_evm.TU.Sc2ySwM_368.2372 Anthoceros agrestis HOM05D006425 ORTHO05D007312 3.7e-229 799.3 1030 44.8
BcaC07g42430 Brassica carinata HOM05D006425 ORTHO05D007312 2.4e-207 726.9 518 69.5
CBR_g42133 Chara braunii HOM05D006425 ORTHO05D007312 1.0e-197 694.9 1504 34.0
Sed0002059 Sechium edule HOM05D006425 ORTHO05D007312 1.2e-195 688.0 656 56.9
Sopen01g039890 Solanum pennellii HOM05D006425 ORTHO05D007312 4.8e-168 596.3 403 73.9
Gohir.A12G113750 Gossypium hirsutum HOM05D006425 ORTHO05D007312 8.0e-139 499.2 341 73.6
Hma1.2p1_0180F.1_g079620 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.7e-88 332.0 203 79.8
MD01G1085000 Malus domestica HOM05D006425 ORTHO05D007312 6.1e-54 217.2 163 66.3
Hma1.2p1_0180F.1_g079630 Hydrangea macrophylla HOM05D006425 ORTHO05D007312 1.1e-42 179.9 111 79.3
SEGI_38786 Sequoiadendron giganteum HOM05D006425 ORTHO05D007312 6.1e-22 110.9 56 85.7
Actinidia20216 Actinidia chinensis HOM05D006425 ORTHO05D007312 6.4e-19 100.9 63 73.0
VMungo0720G2246 Vigna mungo HOM05D006425 ORTHO05D007312 1.5e-15 89.7 65 60.0
CSS0018706 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 9.2e-10 70.5 54 55.6
CSS0027474 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 9.2e-10 70.5 54 55.6
MCO11G284 Micromonas commoda HOM05D006425 ORTHO05D007312 4.6e-09 68.2 203 29.1
TPR.G10878 Trifolium pratense HOM05D020190 ORTHO05D018030 1.5e-07 63.2 73 45.2
TPR.G39590 Trifolium pratense HOM05D020190 ORTHO05D018030 2.5e-07 62.4 73 45.2
CSS0040683 Camellia sinensis var. sinensis HOM05D006425 ORTHO05D007312 3.3e-07 62.0 40 62.5


User provided reference genes

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