Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 7.6e-86 320.5 163 100.0
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 7.7e-54 214.2 148 71.6
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 1.0e-53 213.8 165 65.5
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 1.0e-53 213.8 151 71.5
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.3e-53 213.4 152 67.8
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 3.8e-53 211.8 146 71.2
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 5.0e-53 211.5 161 65.8
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 5.0e-53 211.5 150 67.3
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 6.5e-53 211.1 148 70.9
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 1.5e-52 209.9 147 68.0
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 3.2e-52 208.8 160 66.2
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 3.2e-52 208.8 146 68.5
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 3.2e-52 208.8 148 70.3
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 3.2e-52 208.8 150 70.0
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 5.5e-52 208.0 159 66.0
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 5.5e-52 208.0 165 61.8
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 5.5e-52 208.0 159 65.4
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 9.4e-52 207.2 153 66.7
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 9.4e-52 207.2 164 61.0
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 1.6e-51 206.5 160 66.2
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 2.1e-51 206.1 163 64.4
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 3.6e-51 205.3 144 68.8
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 6.1e-51 204.5 163 64.4
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 8.0e-51 204.1 160 65.0
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 1.0e-50 203.8 153 67.3
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 1.0e-50 203.8 144 70.1
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 1.0e-50 203.8 158 61.4
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 1.4e-50 203.4 144 70.1
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 1.8e-50 203.0 146 68.5
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 2.3e-50 202.6 156 64.7
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 2.3e-50 202.6 156 64.7
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 1.5e-49 199.9 144 68.8
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 1.5e-49 199.9 162 61.1
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 1.5e-49 199.9 144 67.4
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 2.0e-49 199.5 144 68.8
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 2.0e-49 199.5 158 63.9
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 2.0e-49 199.5 156 64.1
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 3.3e-49 198.7 159 64.8
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 3.3e-49 198.7 144 68.8
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 3.3e-49 198.7 158 64.6
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 3.3e-49 198.7 157 65.6
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 4.4e-49 198.4 158 63.9
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 4.4e-49 198.4 163 62.6
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 4.4e-49 198.4 160 63.8
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 5.7e-49 198.0 164 60.4
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 5.7e-49 198.0 162 63.6
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 7.4e-49 197.6 161 60.2
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 7.4e-49 197.6 166 60.8
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 9.7e-49 197.2 155 65.8
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 1.3e-48 196.8 160 62.5
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 2.2e-48 196.1 155 65.2
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 6.3e-48 194.5 168 58.3
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 6.3e-48 194.5 143 63.6
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 6.3e-48 194.5 158 58.2
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 8.2e-48 194.1 144 66.7
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 8.2e-48 194.1 143 66.4
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 1.1e-47 193.7 162 61.1
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.4e-47 193.4 145 63.4
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 1.4e-47 193.4 158 63.3
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 3.1e-47 192.2 156 62.2
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 3.1e-47 192.2 162 62.3
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 5.3e-47 191.4 158 60.8
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 9.1e-47 190.7 139 65.5
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 9.1e-47 190.7 156 62.2
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.2e-46 190.3 158 60.1
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.6e-46 189.1 158 60.8
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 3.5e-46 188.7 161 56.5
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 3.5e-46 188.7 153 63.4
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 4.5e-46 188.3 157 58.6
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 4.5e-46 188.3 162 57.4
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 1.0e-45 187.2 155 60.6
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.3e-45 186.8 166 59.0
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 1.7e-45 186.4 149 62.4
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 2.2e-45 186.0 139 63.3
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.9e-45 185.7 141 62.4
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 6.5e-45 184.5 144 63.9
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 1.1e-44 183.7 158 61.4
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 1.1e-44 183.7 154 62.3
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.9e-44 183.0 166 57.8
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 2.5e-44 182.6 155 59.4
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 1.6e-43 179.9 157 57.3
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 3.6e-43 178.7 149 60.4
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 4.7e-43 178.3 155 54.8
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 6.1e-43 177.9 137 60.6
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.4e-42 176.8 139 62.6
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 1.8e-42 176.4 142 58.5
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 1.2e-41 173.7 137 59.1
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 1.5e-41 173.3 146 56.8
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 2.0e-41 172.9 162 56.8
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 3.4e-41 172.2 154 55.8
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 3.4e-41 172.2 157 54.8
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 1.7e-40 169.9 151 55.6
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 2.2e-40 169.5 137 59.1
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 2.8e-40 169.1 149 57.0
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 2.8e-40 169.1 156 54.5
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 1.4e-39 166.8 140 57.9
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.0e-38 162.9 111 69.4
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.2e-37 159.5 133 57.1
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 3.8e-37 158.7 175 48.6
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 6.5e-37 157.9 114 70.2
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 8.5e-37 157.5 114 69.3
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 4.2e-36 155.2 115 67.8
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 5.5e-36 154.8 133 56.4
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 1.2e-35 153.7 136 53.7
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 1.0e-34 150.6 139 57.6
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.5e-33 146.7 162 46.9
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 1.7e-32 143.3 112 59.8
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 3.1e-31 139.0 154 51.3
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 4.1e-31 138.7 149 49.0
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 1.2e-30 137.1 143 48.3
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 1.9e-28 129.8 110 56.4
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 1.9e-28 129.8 162 43.2
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 2.6e-25 119.4 144 41.0
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 5.7e-25 118.2 142 35.9
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 1.1e-23 114.0 138 44.9
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 2.4e-23 112.8 76 67.1
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 2.3e-21 106.3 144 44.4
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 3.9e-21 105.5 75 68.0
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 3.9e-21 105.5 79 68.4
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 5.0e-21 105.1 99 51.5
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 7.3e-20 101.3 150 36.7
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 2.3e-18 96.3 173 34.7
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 1.7e-16 90.1 64 67.2
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 2.9e-16 89.4 69 63.8
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 1.1e-15 87.4 137 38.7
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.4e-15 87.0 76 60.5
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 1.3e-13 80.5 98 43.9
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 3.9e-13 79.0 150 32.7
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 3.1e-10 69.3 76 44.7
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 6.4e-08 61.6 41 61.0
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.4e-07 60.5 57 45.6


User provided reference genes

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