Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc138.32 Carica papaya HOM05D009958 ORTHO05D007393 1.3e-76 289.7 143 100.0
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 1.5e-24 116.7 146 45.9
Manes.13G153300 Manihot esculenta HOM05D009958 ORTHO05D007393 1.7e-17 93.2 139 40.3
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 6.6e-17 91.3 165 36.4
Thecc.01G147200 Theobroma cacao HOM05D009958 ORTHO05D007393 3.3e-16 89.0 164 36.0
Sabra19G0000200 Salix brachista HOM05D009958 ORTHO05D007393 1.6e-15 86.7 166 37.3
Potri.018G137700 Populus trichocarpa HOM05D009958 ORTHO05D007393 2.8e-15 85.9 151 38.4
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.8e-15 85.9 158 34.8
Potri.T045901 Populus trichocarpa HOM05D009958 ORTHO05D007393 3.6e-15 85.5 151 38.4
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.4e-14 83.6 169 37.3
Gorai.007G067700 Gossypium raimondii HOM05D009958 ORTHO05D007393 4.0e-14 82.0 137 40.1
Gohir.A11G058500 Gossypium hirsutum HOM05D009958 ORTHO05D007393 6.8e-14 81.3 138 37.7
Ciclev10026723m.g Citrus clementina HOM05D009958 ORTHO05D007393 5.8e-13 78.2 146 38.4
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.7e-12 76.6 179 29.1
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 1.7e-12 76.6 159 36.5
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 1.7e-12 76.6 159 36.5
COL.COLO4_33532 Corchorus olitorius HOM05D009958 ORTHO05D007393 2.2e-12 76.3 168 36.3
Gohir.D11G062800 Gossypium hirsutum HOM05D009958 ORTHO05D007393 6.4e-12 74.7 137 38.7
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 6.4e-12 74.7 166 34.9
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 8.3e-12 74.3 179 32.4
Duzib264G0789 Durio zibethinus HOM05D009958 ORTHO05D007393 1.1e-11 73.9 167 32.9
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 1.2e-10 70.5 153 34.0
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 2.1e-10 69.7 166 33.1
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 2.1e-10 69.7 139 36.7
Haze_19351 Corylus avellana HOM05D009958 ORTHO05D007393 3.5e-10 68.9 158 34.8
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 4.6e-10 68.6 153 32.7
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 1.3e-09 67.0 166 30.7
TWI79G1017 Tripterygium wilfordii HOM05D009958 ORTHO05D007393 3.9e-09 65.5 155 34.8
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 2.5e-08 62.8 153 33.3
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 3.3e-08 62.4 162 30.2
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 4.3e-08 62.0 160 28.1
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 5.6e-08 61.6 155 32.9
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 7.3e-08 61.2 164 26.8
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 9.5e-08 60.8 153 33.3
Aqoxy2G00980 Aquilegia oxysepala HOM05D009958 ORTHO05D007393 1.2e-07 60.5 132 38.6
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 1.2e-07 60.5 162 28.4
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 1.2e-07 60.5 154 29.9
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 2.1e-07 59.7 141 32.6
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 3.6e-07 58.9 171 30.4
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 6.2e-07 58.2 185 29.7
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 8.1e-07 57.8 141 32.6
Cfa020918 Carpinus fangiana HOM05D009958 ORTHO05D007393 1.1e-06 57.4 163 31.9
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 1.4e-06 57.0 158 31.0
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 1.4e-06 57.0 184 29.3
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.8e-06 56.6 174 29.3
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 2.4e-06 56.2 176 30.1
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 2.4e-06 56.2 150 31.3
Atru.chr3.1470 Acer truncatum HOM05D009958 ORTHO05D007393 3.1e-06 55.8 155 34.8
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 3.1e-06 55.8 183 29.0
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 3.1e-06 55.8 141 33.3
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 5.2e-06 55.1 138 32.6
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 5.2e-06 55.1 136 30.1
Aa31LG4G8710 Aethionema arabicum HOM05D010479 ORTHO05D007393 6.8e-06 54.7 141 33.3
CARHR064730 Cardamine hirsuta HOM05D010479 ORTHO05D007393 8.9e-06 54.3 153 30.1
Oeu052900.1 Olea europaea HOM05D009958 ORTHO05D007393 8.9e-06 54.3 148 29.7


User provided reference genes

Program Settings