Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 1.7e-174 615.9 314 100.0
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 2.8e-60 236.5 276 46.7
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 1.8e-59 233.8 276 46.4
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 2.2e-57 226.9 271 45.4
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 5.4e-56 222.2 269 46.5
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 1.2e-55 221.1 271 48.0
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 3.5e-55 219.5 269 45.7
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 6.0e-55 218.8 270 44.1
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 7.9e-55 218.4 270 44.1
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 2.3e-54 216.9 271 47.2
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 8.7e-54 214.9 272 43.0
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 1.9e-53 213.8 270 45.2
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 7.4e-53 211.8 258 46.1
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 4.8e-52 209.1 276 43.8
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.4e-51 206.8 272 44.5
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 6.9e-51 205.3 269 43.5
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 1.5e-50 204.1 257 45.9
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.4e-50 203.0 271 42.8
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 4.5e-50 202.6 263 43.7
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 7.6e-50 201.8 263 43.7
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 8.4e-49 198.4 266 44.4
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 8.4e-49 198.4 261 43.7
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 1.1e-48 198.0 267 44.9
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 4.2e-48 196.1 272 43.0
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 5.5e-48 195.7 270 43.0
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 9.3e-48 194.9 265 44.2
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 1.6e-47 194.1 267 43.8
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 2.7e-47 193.4 279 42.7
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 6.0e-47 192.2 268 43.3
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.3e-46 191.0 268 44.4
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 3.9e-46 189.5 259 45.2
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 6.7e-46 188.7 270 40.0
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 8.7e-46 188.3 271 41.7
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 8.7e-46 188.3 279 43.0
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.1e-45 188.0 271 41.3
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 1.9e-45 187.2 266 44.7
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 7.4e-45 185.3 266 44.7
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 7.4e-45 185.3 266 44.7
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 1.3e-44 184.5 264 43.6
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 2.4e-43 180.3 263 41.4
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 6.9e-43 178.7 271 38.7
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.6e-42 176.8 262 42.4
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 7.6e-42 175.3 270 40.7
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 2.9e-41 173.3 225 42.7
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 3.8e-41 172.9 261 41.8
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 4.9e-41 172.6 270 40.4
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 6.5e-41 172.2 268 40.7
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 6.5e-41 172.2 270 40.0
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 8.4e-41 171.8 272 39.3
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 1.1e-40 171.4 275 37.1
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.1e-40 171.4 280 39.3
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 4.2e-40 169.5 280 38.6
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 2.7e-39 166.8 250 42.8
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 3.5e-39 166.4 275 41.5
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 6.0e-39 165.6 261 40.2
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.3e-38 164.5 269 39.0
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 1.8e-38 164.1 269 38.7
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 3.0e-38 163.3 257 39.3
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 8.7e-38 161.8 269 37.5
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.1e-37 161.4 254 40.6
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 2.5e-37 160.2 267 38.2
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 5.7e-37 159.1 257 40.9
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 9.6e-37 158.3 268 37.7
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 3.7e-36 156.4 206 43.2
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 4.8e-36 156.0 259 39.0
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 8.2e-36 155.2 264 36.0
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.1e-35 154.8 269 38.3
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 3.1e-35 153.3 244 39.8
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 4.1e-35 152.9 263 38.8
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 5.3e-35 152.5 275 36.0
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 6.9e-35 152.1 264 38.3
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 9.0e-35 151.8 269 36.1
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 1.5e-34 151.0 272 36.4
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 2.6e-34 150.2 265 37.4
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 2.2e-33 147.1 260 39.2
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 2.1e-31 140.6 272 35.3
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.7e-31 140.2 209 42.1
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.3e-30 137.1 265 34.0
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.3e-30 137.1 265 34.0
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 3.9e-30 136.3 277 34.7
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 4.3e-29 132.9 286 33.9
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 1.3e-28 131.3 231 38.1
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 5.3e-27 125.9 246 30.9
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 2.5e-24 117.1 265 29.1
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 3.6e-23 113.2 264 29.5
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 3.0e-22 110.2 265 29.8
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 5.1e-22 109.4 264 29.2
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.6e-21 107.1 240 32.9
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 4.3e-21 106.3 264 29.9
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 4.3e-21 106.3 265 29.8
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 5.7e-21 105.9 107 48.6
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 7.4e-21 105.5 267 28.8
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 2.8e-20 103.6 265 29.4
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 4.8e-20 102.8 265 29.4
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 4.8e-20 102.8 265 29.4
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 1.1e-19 101.7 265 29.1
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 3.1e-19 100.1 265 28.7
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 3.1e-19 100.1 127 42.5
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 2.5e-16 90.5 82 57.3
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 5.5e-16 89.4 247 28.7
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 2.7e-15 87.0 102 47.1
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.0e-14 85.1 102 46.1
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.8e-14 84.3 107 40.2
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 5.2e-14 82.8 92 44.6
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 2.6e-13 80.5 255 27.1
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 9.7e-13 78.6 257 26.5
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 1.3e-12 78.2 92 44.6
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 4.5e-10 69.7 80 47.5
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 1.9e-08 64.3 230 25.2
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 8.0e-07 58.9 90 38.9
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.0e-06 58.5 174 30.5
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 3.0e-06 57.0 74 37.8


User provided reference genes

Program Settings