Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 1.7e-173 614.0 306 100.0
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 1.5e-68 265.4 265 50.6
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 2.5e-68 264.6 286 49.0
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 9.7e-68 262.7 269 48.0
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 8.8e-61 239.6 283 45.9
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 2.2e-59 235.0 255 46.7
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 1.1e-58 232.6 255 47.1
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 3.1e-58 231.1 245 44.9
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 1.5e-57 228.8 261 44.1
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 4.5e-57 227.3 266 43.2
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 8.5e-56 223.0 251 46.2
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 1.2e-54 219.2 261 44.1
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 6.7e-53 213.4 308 40.9
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 6.7e-53 213.4 274 41.2
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 6.7e-53 213.4 274 41.2
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 9.1e-50 203.0 316 38.9
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 2.0e-49 201.8 265 41.9
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 7.7e-49 199.9 306 39.9
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 2.9e-48 198.0 237 43.5
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 4.7e-46 190.7 262 38.9
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 1.5e-44 185.7 308 35.7
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 8.2e-43 179.9 276 39.9
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 2.0e-41 175.3 209 41.6
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 2.9e-40 171.4 261 38.3
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 1.1e-39 169.5 227 42.7
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 3.2e-39 167.9 289 37.4
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 1.6e-38 165.6 287 35.5
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 8.0e-38 163.3 244 36.9
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 1.4e-37 162.5 262 37.8
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 8.3e-35 153.3 209 38.3
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 1.8e-34 152.1 232 37.1
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 7.0e-34 150.2 211 38.9
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 3.5e-33 147.9 205 38.5
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 4.5e-33 147.5 211 38.4
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 5.9e-33 147.1 228 37.7
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 2.9e-32 144.8 229 36.2
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 2.9e-32 144.8 182 41.2
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 2.3e-29 135.2 221 35.7
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 2.0e-28 132.1 206 35.9
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 7.5e-28 130.2 205 35.6
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 1.8e-26 125.6 277 31.8
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 7.0e-26 123.6 239 32.2
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 1.2e-25 122.9 165 38.8
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 1.7e-24 119.0 176 36.9
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 9.5e-23 113.2 186 37.6
AL1G45930 Arabidopsis lyrata HOM05D008483 ORTHO05D010726 4.9e-19 100.9 119 40.3
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 1.4e-18 99.4 177 31.6
RcHm_v2.0_Chr2g0139321 Rosa chinensis HOM05D008483 ORTHO05D010726 1.6e-17 95.9 182 34.1
ATR1089G063 Amborella trichopoda HOM05D008483 ORTHO05D010726 1.0e-13 83.2 193 29.0
CSS0039062 Camellia sinensis var. sinensis HOM05D006556 ORTHO05D008146 3.5e-09 68.2 248 26.2
Sc03g0004000 Simmondsia chinensis HOM05D006556 ORTHO05D008146 5.0e-08 64.3 287 25.1
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 6.6e-08 63.9 209 24.4
FAN06G0419 Fragaria x ananassa HOM05D006556 ORTHO05D008146 8.6e-08 63.5 263 25.1
Lj6A176T48 Lonicera japonica HOM05D006556 ORTHO05D008146 1.9e-07 62.4 272 26.1
Lalb_Chr05g0214861 Lupinus albus HOM05D006556 ORTHO05D008146 1.9e-07 62.4 248 24.6
Atru.chr3.118 Acer truncatum HOM05D006556 ORTHO05D008146 2.5e-07 62.0 262 24.4
DCAR_014305 Daucus carota HOM05D000534 ORTHO05D008146 4.3e-07 61.2 257 26.1
RcHm_v2.0_Chr1g0326571 Rosa chinensis HOM05D006556 ORTHO05D008146 4.3e-07 61.2 273 25.6
Ciclev10018243m.g Citrus clementina HOM05D006931 ORTHO05D008782 5.6e-07 60.8 178 23.0
Lj6P230T13 Lonicera japonica HOM05D006556 ORTHO05D008146 5.6e-07 60.8 257 25.7
Prupe.2G066000 Prunus persica HOM05D006556 ORTHO05D008146 9.5e-07 60.1 246 24.4
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 1.2e-06 59.7 88 31.8
FAN03G2556 Fragaria x ananassa HOM05D006556 ORTHO05D008146 1.2e-06 59.7 244 24.2
RcHm_v2.0_Chr1g0326501 Rosa chinensis HOM05D006556 ORTHO05D008146 1.2e-06 59.7 246 24.8
Potri.015G105400 Populus trichocarpa HOM05D005764 ORTHO05D006600 1.6e-06 59.3 242 19.8
arahy.Tifrunner.gnm1.ann1.U9N0YZ Arachis hypogaea HOM05D006858 ORTHO05D008767 2.8e-06 58.5 222 25.2
SalBow1G8502 Salvia bowleyana HOM05D006556 ORTHO05D008146 2.8e-06 58.5 267 23.6
Ciclev10026953m.g Citrus clementina HOM05D006556 ORTHO05D008146 4.7e-06 57.8 263 24.3
MD05G1037900 Malus domestica HOM05D006556 ORTHO05D008146 4.7e-06 57.8 283 25.1
arahy.Tifrunner.gnm1.ann1.3PJ361 Arachis hypogaea HOM05D006858 ORTHO05D008767 6.2e-06 57.4 222 24.8
C04p47210 Brassica napus HOM05D007358 ORTHO05D009117 6.2e-06 57.4 81 35.8
BolC4t26320H Brassica oleracea HOM05D007358 ORTHO05D009117 6.2e-06 57.4 81 35.8
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 6.2e-06 57.4 89 32.6
Actinidia14742 Actinidia chinensis HOM05D008483 ORTHO05D018225 8.0e-06 57.0 63 41.3
Ah.02g120040 Amaranthus hybridus HOM05D007496 ORTHO05D009479 8.0e-06 57.0 124 32.3


User provided reference genes

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