Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc136.58 Carica papaya HOM05D005171 ORTHO05D006343 5.1e-85 317.8 168 100.0
Cpa.g.c43179 Carica papaya HOM05D005171 ORTHO05D006343 9.0e-66 253.8 133 100.0
Aa31sc733G10 Aethionema arabicum HOM05D005171 ORTHO05D006343 3.0e-37 159.1 135 65.9
THA.LOC104815372 Tarenaya hassleriana HOM05D005171 ORTHO05D006343 6.3e-35 151.4 140 62.1
Duzib138G0034 Durio zibethinus HOM05D005171 ORTHO05D006343 3.2e-31 139.0 134 63.4
Sp3g23130 Schrenkiella parvula HOM05D005171 ORTHO05D006343 3.6e-30 135.6 133 59.4
Manes.12G067100 Manihot esculenta HOM05D005171 ORTHO05D006343 1.4e-29 133.7 127 66.9
Thhalv10002382m.g Eutrema salsugineum HOM05D005171 ORTHO05D006343 1.5e-28 130.2 133 57.9
Carub.0003s2593 Capsella rubella HOM05D005171 ORTHO05D006343 2.6e-28 129.4 135 56.3
Potri.001G315950 Populus trichocarpa HOM05D005171 ORTHO05D006343 9.8e-28 127.5 127 60.6
Sabra16G0199800 Salix brachista HOM05D005171 ORTHO05D006343 1.7e-27 126.7 131 59.5
TWI36G0325 Tripterygium wilfordii HOM05D005171 ORTHO05D006343 2.2e-27 126.3 132 59.1
BcaB06g26770 Brassica carinata HOM05D005171 ORTHO05D006343 2.8e-27 125.9 133 57.1
MELO3C024178.2 Cucumis melo HOM05D005171 ORTHO05D006343 4.8e-27 125.2 136 57.4
CsaV3_7G002340 Cucumis sativus L. HOM05D005171 ORTHO05D006343 8.3e-27 124.4 133 58.6
AT2G04235 Arabidopsis thaliana HOM05D005171 ORTHO05D006343 1.1e-26 124.0 133 55.6
AL3G41930 Arabidopsis lyrata HOM05D005171 ORTHO05D006343 1.8e-26 123.2 133 59.4
Ciclev10014049m.g Citrus clementina HOM05D005171 ORTHO05D006343 2.4e-26 122.9 134 58.2
Sed0010628 Sechium edule HOM05D005171 ORTHO05D006343 1.6e-25 120.2 133 58.6
ClCG02G003060 Citrullus lanatus HOM05D005171 ORTHO05D006343 2.0e-25 119.8 123 60.2
Thecc.01G199700 Theobroma cacao HOM05D005171 ORTHO05D006343 2.7e-25 119.4 134 56.7
A07p06800 Brassica napus HOM05D005171 ORTHO05D006343 1.0e-24 117.5 127 56.7
Sed0008164 Sechium edule HOM05D005171 ORTHO05D006343 1.3e-24 117.1 133 57.9
C07p10370 Brassica napus HOM05D005171 ORTHO05D006343 2.9e-24 115.9 134 55.2
BcaC06g35856 Brassica carinata HOM05D005171 ORTHO05D006343 3.8e-24 115.5 134 54.5
BolC7t41487H Brassica oleracea HOM05D005171 ORTHO05D006343 3.8e-24 115.5 134 54.5
Gohir.A11G147450 Gossypium hirsutum HOM05D005171 ORTHO05D006343 5.0e-24 115.2 140 52.1
MD09G1131900 Malus domestica HOM05D005171 ORTHO05D006343 6.5e-24 114.8 139 56.8
MD17G1119600 Malus domestica HOM05D005171 ORTHO05D006343 1.1e-23 114.0 136 58.1
COL.COLO4_19656 Corchorus olitorius HOM05D005171 ORTHO05D006343 1.5e-23 113.6 136 55.9
CANSAT64G2466 Cannabis sativa HOM05D005171 ORTHO05D006343 1.9e-23 113.2 134 55.2
BraA07t28471Z Brassica rapa HOM05D005171 ORTHO05D006343 5.5e-23 111.7 116 58.6
Prupe.3G194100 Prunus persica HOM05D005171 ORTHO05D006343 5.5e-23 111.7 136 58.8
Atru.chr6.3433 Acer truncatum HOM05D005171 ORTHO05D006343 1.0e-21 107.5 140 55.7
Gohir.D11G154350 Gossypium hirsutum HOM05D005171 ORTHO05D006343 5.2e-21 105.1 135 50.4
Gorai.007G164500 Gossypium raimondii HOM05D005171 ORTHO05D006343 1.2e-20 104.0 134 50.0
PGR083G1863 Punica granatum HOM05D005171 ORTHO05D006343 1.7e-19 100.1 137 50.4
Lalb_Chr10g0094191 Lupinus albus HOM05D005171 ORTHO05D006343 4.1e-18 95.5 155 47.1
RcHm_v2.0_Chr2g0155571 Rosa chinensis HOM05D005171 ORTHO05D006343 5.4e-18 95.1 135 51.1
FvH4_6g40370 Fragaria vesca HOM05D005171 ORTHO05D006343 1.6e-17 93.6 136 52.9
FAN02G4474 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.0e-17 93.2 135 54.8
FAN05G5461 Fragaria x ananassa HOM05D005171 ORTHO05D006343 3.5e-17 92.4 136 52.2
FAN14G5634 Fragaria x ananassa HOM05D005171 ORTHO05D006343 5.9e-17 91.7 136 52.2
TAR627G0657 Trochodendron aralioides HOM05D005171 ORTHO05D006343 1.0e-16 90.9 119 51.3
FAN09G0598 Fragaria x ananassa HOM05D005171 ORTHO05D006343 2.9e-16 89.4 134 49.3
Rhsim06G0179100 Rhododendron simsii HOM05D005171 ORTHO05D006343 3.8e-16 89.0 138 44.2
Ca_16333_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 6.6e-16 88.2 117 45.3
Ca_30417_v3 Cicer arietinum L. HOM05D005171 ORTHO05D006343 6.6e-16 88.2 117 45.3
Actinidia20605 Actinidia chinensis HOM05D005171 ORTHO05D006343 1.9e-15 86.7 138 47.8
Actinidia20619 Actinidia chinensis HOM05D005171 ORTHO05D006343 2.5e-15 86.3 138 47.1
Hund13065 Selenicereus undatus HOM05D005171 ORTHO05D006343 2.1e-14 83.2 139 42.4
vmacro12061 Vaccinium macrocarpon HOM05D005171 ORTHO05D000013 2.1e-14 83.2 143 45.5
arahy.Tifrunner.gnm1.ann1.U10BM9 Arachis hypogaea HOM05D005171 ORTHO05D006343 3.6e-14 82.4 116 48.3
Haze_12584 Corylus avellana HOM05D005171 ORTHO05D006343 1.0e-13 80.9 135 46.7
Phvul.006G005000 Phaseolus vulgaris HOM05D005171 ORTHO05D006343 1.8e-13 80.1 127 42.5
Nn1g07734 Nelumbo nucifera HOM05D005171 ORTHO05D006343 3.0e-13 79.3 117 48.7
VMungo0540G0527 Vigna mungo HOM05D005171 ORTHO05D006343 6.8e-13 78.2 136 44.9
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 1.5e-12 77.0 144 41.7
Hma1.2p1_0629F.1_g192120 Hydrangea macrophylla HOM05D005171 ORTHO05D006343 1.5e-12 77.0 119 44.5
Psat5g105360 Pisum sativum HOM05D005171 ORTHO05D006343 2.0e-12 76.6 118 43.2
QL04p066976 Quercus lobata HOM05D005171 ORTHO05D006343 9.8e-12 74.3 126 47.6
Sopen07g023720 Solanum pennellii HOM05D005171 ORTHO05D006343 2.2e-11 73.2 126 41.3
Lj6g0011858 Lotus japonicus HOM05D005171 ORTHO05D006343 2.9e-11 72.8 82 53.7
Lsat_1_v5_gn_9_102901 Lactuca sativa HOM05D005171 ORTHO05D006343 3.7e-11 72.4 134 43.3
TPR.G27424 Trifolium pratense HOM05D005171 ORTHO05D006343 3.7e-11 72.4 120 38.3
Glyma.20G061000 Glycine max HOM05D005171 ORTHO05D006343 4.9e-11 72.0 135 40.7
Solyc07g045170.3 Solanum lycopersicum HOM05D005171 ORTHO05D006343 4.9e-11 72.0 126 41.3
Nitab4.5_0004941g0030 Nicotiana tabacum HOM05D005171 ORTHO05D006343 1.1e-10 70.9 136 40.4
Ah.10g032550 Amaranthus hybridus HOM05D005171 ORTHO05D006343 1.4e-10 70.5 135 42.2
arahy.Tifrunner.gnm1.ann1.AZD9M5 Arachis hypogaea HOM05D005171 ORTHO05D006343 1.2e-09 67.4 118 43.2
Actinidia12354 Actinidia chinensis HOM05D005171 ORTHO05D006343 2.0e-09 66.6 71 54.9
Lsat_1_v5_gn_7_97220 Lactuca sativa HOM05D005171 ORTHO05D006343 2.7e-09 66.2 133 42.9
DCAR_012742 Daucus carota HOM05D005171 ORTHO05D006343 3.5e-09 65.9 130 40.8
Glyma.13G008500 Glycine max HOM05D005171 ORTHO05D006343 3.5e-09 65.9 128 40.6
EL10Ac2g03228 Beta vulgaris HOM05D005171 ORTHO05D006343 5.9e-09 65.1 141 40.4
Migut.M00063 Erythranthe guttata HOM05D005171 ORTHO05D006343 7.8e-09 64.7 126 38.9
SalBow7G0566 Salvia bowleyana HOM05D005171 ORTHO05D006343 1.7e-08 63.5 131 35.9
Lj1C801G5 Lonicera japonica HOM05D005171 ORTHO05D006343 2.3e-08 63.2 86 48.8
Nitab4.5_0003086g0060 Nicotiana tabacum HOM05D005171 ORTHO05D006343 2.3e-08 63.2 122 42.6
Peaxi162Scf00359g00324 Petunia axillaris HOM05D005171 ORTHO05D006343 2.3e-08 63.2 142 37.3
Cc05_g01980 Coffea canephora HOM05D005171 ORTHO05D006343 1.9e-07 60.1 123 42.3
Oeu036991.1 Olea europaea HOM05D005171 ORTHO05D006343 5.6e-07 58.5 115 41.7
HanXRQChr13g0389891 Helianthus annuus HOM05D005171 ORTHO05D006343 7.3e-07 58.2 95 46.3
Sc20g0003130 Simmondsia chinensis HOM05D005171 ORTHO05D006343 3.6e-06 55.8 133 33.1


User provided reference genes

Program Settings