Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1346.1 Carica papaya HOM05D004252 ORTHO05D005101 1.8e-28 128.6 70 100.0
COL.COLO4_15351 Corchorus olitorius HOM05D004252 ORTHO05D005101 1.3e-26 122.5 70 94.3
Duzib128G1785 Durio zibethinus HOM05D004252 ORTHO05D005101 2.2e-26 121.7 70 92.9
Thecc.05G283200 Theobroma cacao HOM05D004252 ORTHO05D005101 3.8e-26 120.9 70 92.9
Hund06974 Selenicereus undatus HOM05D004252 ORTHO05D005101 8.5e-26 119.8 70 92.9
Manes.09G152800 Manihot esculenta HOM05D004252 ORTHO05D005101 1.9e-25 118.6 70 88.6
PGR142G2894 Punica granatum HOM05D004252 ORTHO05D005101 2.5e-25 118.2 69 89.9
Dinv20302 Davidia involucrata HOM05D004252 ORTHO05D005101 3.2e-25 117.9 70 88.6
Gohir.D08G232300 Gossypium hirsutum HOM05D004252 ORTHO05D005101 3.2e-25 117.9 70 90.0
Gorai.004G246800 Gossypium raimondii HOM05D004252 ORTHO05D005101 3.2e-25 117.9 70 90.0
Nn3g19509 Nelumbo nucifera HOM05D004252 ORTHO05D005101 4.2e-25 117.5 70 90.0
THA.LOC104821672 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 5.5e-25 117.1 70 90.0
TWI12G0933 Tripterygium wilfordii HOM05D004252 ORTHO05D005101 5.5e-25 117.1 70 90.0
Potri.005G053700 Populus trichocarpa HOM05D004252 ORTHO05D005101 7.2e-25 116.7 70 88.6
Sabra05G0047100 Salix brachista HOM05D004252 ORTHO05D005101 7.2e-25 116.7 70 88.6
CANSAT54G1217 Cannabis sativa HOM05D004252 ORTHO05D005101 9.4e-25 116.3 69 87.0
Duzib177G1152 Durio zibethinus HOM05D004252 ORTHO05D005101 9.4e-25 116.3 70 88.6
Potri.013G041201 Populus trichocarpa HOM05D004252 ORTHO05D005101 9.4e-25 116.3 70 88.6
TAR362G1238 Trochodendron aralioides HOM05D004252 ORTHO05D005101 1.2e-24 115.9 70 88.6
Gohir.A08G215700 Gossypium hirsutum HOM05D004252 ORTHO05D005101 2.1e-24 115.2 70 88.6
Sabra13G0038000 Salix brachista HOM05D004252 ORTHO05D005101 2.7e-24 114.8 70 87.1
GSVIVG01021781001 Vitis vinifera HOM05D004252 ORTHO05D005101 2.7e-24 114.8 70 88.6
Aa31LG5G15140 Aethionema arabicum HOM05D004252 ORTHO05D005101 3.6e-24 114.4 70 84.3
EL10Ac4g09148 Beta vulgaris HOM05D004252 ORTHO05D005101 4.7e-24 114.0 70 87.1
Eucgr.B02119 Eucalyptus grandis HOM05D004252 ORTHO05D005101 4.7e-24 114.0 69 89.9
Lj1A1079G39 Lonicera japonica HOM05D004252 ORTHO05D005101 6.1e-24 113.6 70 84.3
Actinidia32806 Actinidia chinensis HOM05D004252 ORTHO05D005101 7.9e-24 113.2 70 84.3
CSS0026350 Camellia sinensis var. sinensis HOM05D004252 ORTHO05D005101 7.9e-24 113.2 70 82.9
Thhalv10019885m.g Eutrema salsugineum HOM05D004252 ORTHO05D005101 1.0e-23 112.8 70 84.3
THA.LOC104818630 Tarenaya hassleriana HOM05D004252 ORTHO05D005101 1.0e-23 112.8 70 87.1
TAR633G0655 Trochodendron aralioides HOM05D004252 ORTHO05D005101 1.0e-23 112.8 70 87.1
Atru.chr2.826 Acer truncatum HOM05D004252 ORTHO05D005101 2.3e-23 111.7 70 85.7
Cc02_g30700 Coffea canephora HOM05D004252 ORTHO05D005101 2.3e-23 111.7 70 82.9
AT3G04740 Arabidopsis thaliana HOM05D004252 ORTHO05D005101 3.0e-23 111.3 70 82.9
Lsat_1_v5_gn_5_53600 Lactuca sativa HOM05D004252 ORTHO05D005101 3.0e-23 111.3 70 81.4
Ciclev10000014m.g Citrus clementina HOM05D004252 ORTHO05D005101 3.9e-23 110.9 70 84.3
HanXRQChr03g0080781 Helianthus annuus HOM05D004252 ORTHO05D005101 3.9e-23 110.9 70 81.4
AL3G14870 Arabidopsis lyrata HOM05D004252 ORTHO05D005101 5.1e-23 110.5 70 82.9
Rhsim04G0066800 Rhododendron simsii HOM05D004252 ORTHO05D005101 5.1e-23 110.5 71 84.5
HanXRQChr13g0411361 Helianthus annuus HOM05D004252 ORTHO05D005101 6.7e-23 110.2 70 81.4
Prupe.6G343600 Prunus persica HOM05D004252 ORTHO05D005101 8.8e-23 109.8 70 85.7
ECA240G2739 Erigeron canadensis HOM05D004252 ORTHO05D005101 1.1e-22 109.4 70 80.0
CDE02G2007 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 1.5e-22 109.0 70 82.9
CAN.G134.97 Capsicum annuum HOM05D004252 ORTHO05D005101 2.0e-22 108.6 70 80.0
vmacro20358 Vaccinium macrocarpon HOM05D004252 ORTHO05D005101 2.0e-22 108.6 71 81.7
A05p42820 Brassica napus HOM05D004252 ORTHO05D005101 3.3e-22 107.8 70 81.4
BraA05t22970Z Brassica rapa HOM05D004252 ORTHO05D005101 3.3e-22 107.8 70 81.4
ClCG02G016630 Citrullus lanatus HOM05D004252 ORTHO05D005101 3.3e-22 107.8 69 81.2
Dinv08153 Davidia involucrata HOM05D004252 ORTHO05D005101 3.3e-22 107.8 83 74.7
MD04G1224900 Malus domestica HOM05D004252 ORTHO05D005101 3.3e-22 107.8 70 84.3
MD12G1241600 Malus domestica HOM05D004252 ORTHO05D005101 4.4e-22 107.5 70 84.3
CDE06G0814 Ceratophyllum demersum HOM05D004252 ORTHO05D005101 5.7e-22 107.1 70 81.4
C05p62540 Brassica napus HOM05D004252 ORTHO05D005101 7.4e-22 106.7 70 80.0
BolC5t34909H Brassica oleracea HOM05D004252 ORTHO05D005101 7.4e-22 106.7 70 80.0
MELO3C004380.2 Cucumis melo HOM05D004252 ORTHO05D005101 7.4e-22 106.7 69 79.7
PSO832G2970 Papaver somniferum HOM05D004252 ORTHO05D005101 7.4e-22 106.7 70 80.0
Solyc01g097320.3 Solanum lycopersicum HOM05D004252 ORTHO05D005101 7.4e-22 106.7 70 78.6
Sopen00g013550 Solanum pennellii HOM05D004252 ORTHO05D005101 7.4e-22 106.7 70 78.6
Peaxi162Scf00282g00418 Petunia axillaris HOM05D004252 ORTHO05D005101 9.7e-22 106.3 70 78.6
Sp3g03590 Schrenkiella parvula HOM05D004252 ORTHO05D005101 1.3e-21 105.9 70 78.6
AUR62004951 Chenopodium quinoa HOM05D004252 ORTHO05D005101 1.7e-21 105.5 71 83.1
CsaV3_2G004140 Cucumis sativus L. HOM05D004252 ORTHO05D005101 1.7e-21 105.5 69 78.3
PSO210G6431 Papaver somniferum HOM05D004252 ORTHO05D005101 1.7e-21 105.5 70 80.0
Sc20g0000330 Simmondsia chinensis HOM05D004252 ORTHO05D005101 2.2e-21 105.1 70 81.4
Aqoxy5G01125 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 2.8e-21 104.8 70 78.6
Nitab4.5_0008996g0010 Nicotiana tabacum HOM05D004252 ORTHO05D005101 2.8e-21 104.8 70 78.6
Ah.06g192380 Amaranthus hybridus HOM05D004252 ORTHO05D005101 6.3e-21 103.6 70 78.6
Carub.0003s0391 Capsella rubella HOM05D004252 ORTHO05D005101 6.3e-21 103.6 70 77.1
arahy.Tifrunner.gnm1.ann1.9CBY7M Arachis hypogaea HOM05D004252 ORTHO05D005101 1.4e-20 102.4 69 75.4
arahy.Tifrunner.gnm1.ann1.QZ0BKE Arachis hypogaea HOM05D004252 ORTHO05D005101 1.4e-20 102.4 69 75.4
Aqoxy6G01279 Aquilegia oxysepala HOM05D004252 ORTHO05D005101 1.8e-20 102.1 70 77.1
CAN.G1116.5 Capsicum annuum HOM05D004252 ORTHO05D005101 1.8e-20 102.1 70 74.3
Cfa006427 Carpinus fangiana HOM05D004252 ORTHO05D005101 1.8e-20 102.1 77 75.3
Haze_04358 Corylus avellana HOM05D004252 ORTHO05D005101 1.8e-20 102.1 77 75.3
DCAR_014751 Daucus carota HOM05D004252 ORTHO05D005101 2.4e-20 101.7 70 77.1
FvH4_6g02880 Fragaria vesca HOM05D004252 ORTHO05D005101 2.4e-20 101.7 71 77.5
FAN02G2888 Fragaria x ananassa HOM05D004252 ORTHO05D005101 2.4e-20 101.7 71 77.5
FAN14G3887 Fragaria x ananassa HOM05D004252 ORTHO05D005101 2.4e-20 101.7 71 77.5
arahy.Tifrunner.gnm1.ann1.39XKQR Arachis hypogaea HOM05D004252 ORTHO05D005101 3.1e-20 101.3 69 73.9
Migut.B01091 Erythranthe guttata HOM05D004252 ORTHO05D005101 3.1e-20 101.3 71 76.1
FAN05G2119 Fragaria x ananassa HOM05D004252 ORTHO05D005101 4.1e-20 100.9 71 76.1
Medtr7g115190 Medicago truncatula HOM05D004252 ORTHO05D005101 4.1e-20 100.9 69 73.9
RcHm_v2.0_Chr3g0451091 Rosa chinensis HOM05D004252 ORTHO05D005101 4.1e-20 100.9 71 77.5
CiPaw.08G123300 Carya illinoinensis HOM05D004252 ORTHO05D005101 5.3e-20 100.5 80 71.2
FAN09G2874 Fragaria x ananassa HOM05D004252 ORTHO05D005101 5.3e-20 100.5 71 76.1
Glyma.03G247300 Glycine max HOM05D004252 ORTHO05D005101 5.3e-20 100.5 69 73.9
Glyma.19G245100 Glycine max HOM05D004252 ORTHO05D005101 1.2e-19 99.4 69 72.5
Phvul.006G101900 Phaseolus vulgaris HOM05D004252 ORTHO05D005101 1.2e-19 99.4 69 72.5
TPR.G6924 Trifolium pratense HOM05D004252 ORTHO05D005101 1.2e-19 99.4 69 72.5
VMungo0540G0159 Vigna mungo HOM05D004252 ORTHO05D005101 1.2e-19 99.4 69 72.5
Psat3g007080 Pisum sativum HOM05D004252 ORTHO05D005101 2.0e-19 98.6 70 71.4
Lj1g0020341 Lotus japonicus HOM05D004252 ORTHO05D005101 2.6e-19 98.2 69 71.0
arahy.Tifrunner.gnm1.ann1.YD0KDM Arachis hypogaea HOM05D004252 ORTHO05D005101 5.9e-19 97.1 69 72.5
Ca_09423_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 5.9e-19 97.1 69 71.0
Ca_29790_v3 Cicer arietinum L. HOM05D004252 ORTHO05D005101 5.9e-19 97.1 69 71.0
DCAR_023243 Daucus carota HOM05D004252 ORTHO05D005101 5.9e-19 97.1 70 68.6
SalBow3G2512 Salvia bowleyana HOM05D004252 ORTHO05D005101 5.9e-19 97.1 71 73.2
ATR0665G632 Amborella trichopoda HOM05D004252 ORTHO05D005101 1.0e-18 96.3 70 77.1
BcaB04g19300 Brassica carinata HOM05D004252 ORTHO05D005101 1.0e-18 96.3 70 70.0
Lalb_Chr04g0262241 Lupinus albus HOM05D004252 ORTHO05D005101 1.7e-18 95.5 69 72.5
Sed0020402 Sechium edule HOM05D004252 ORTHO05D005101 2.2e-18 95.1 69 73.9
Medtr1g087060 Medicago truncatula HOM05D004252 ORTHO05D005101 3.8e-18 94.4 70 72.9
arahy.Tifrunner.gnm1.ann1.795G7S Arachis hypogaea HOM05D004252 ORTHO05D005101 6.5e-18 93.6 73 69.9
AUR62001006 Chenopodium quinoa HOM05D004252 ORTHO05D005101 1.1e-17 92.8 58 86.2
QL03p026982 Quercus lobata HOM05D004252 ORTHO05D005101 3.2e-17 91.3 90 61.1
HPP92_026425 Vanilla planifolia HOM05D004252 ORTHO05D005101 3.2e-17 91.3 69 73.9
Zm00001eb097360 Zea mays HOM05D004252 ORTHO05D005101 3.6e-16 87.8 82 62.2
SEGI_02854 Sequoiadendron giganteum HOM05D004252 ORTHO05D005101 4.7e-16 87.4 70 65.7
CiPaw.07G067400 Carya illinoinensis HOM05D004252 ORTHO05D005101 1.0e-15 86.3 80 66.2
Os08g0332800 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 1.0e-15 86.3 75 64.0
Sed0025221 Sechium edule HOM05D004252 ORTHO05D005101 1.0e-15 86.3 69 66.7
Os09g0281900 Oryza sativa ssp. japonica HOM05D004252 ORTHO05D005101 1.4e-15 85.9 79 62.0
SHI18417 Sapria himalayana HOM05D004252 ORTHO05D005101 1.1e-14 82.8 66 66.7
unitig_699.g19676 Utricularia gibba HOM05D004252 ORTHO05D005101 5.7e-14 80.5 63 69.8
SMO118G0536 Selaginella moellendorffii HOM05D004252 ORTHO05D005101 5.9e-11 70.5 67 58.2
Pp3c9_5080 Physcomitrium patens HOM05D004252 ORTHO05D005101 8.5e-10 66.6 63 60.3
AagrBONN_evm.TU.Sc2ySwM_368.2529 Anthoceros agrestis HOM05D004252 ORTHO05D005101 1.1e-09 66.2 66 54.5
Mapoly0110s0011 Marchantia polymorpha HOM05D004252 ORTHO05D005101 1.5e-09 65.9 66 54.5
Pp3c9_4280 Physcomitrium patens HOM05D004252 ORTHO05D005101 2.5e-09 65.1 63 58.7


User provided reference genes

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