Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc132.44 Carica papaya HOM05D000395 ORTHO05D000088 8.7e-159 563.5 275 100.0
Cpa.g.sc132.62 Carica papaya HOM05D000395 ORTHO05D000088 4.8e-48 195.7 263 45.2
Cpa.g.sc132.66 Carica papaya HOM05D000395 ORTHO05D000088 2.5e-36 156.8 202 46.0
Cpa.g.sc132.65 Carica papaya HOM05D000395 ORTHO05D000088 2.7e-19 100.1 199 37.7
Cpa.g.sc132.63 Carica papaya HOM05D000395 ORTHO05D000088 1.7e-13 80.9 202 30.2
Prupe.7G044800 Prunus persica HOM05D000395 ORTHO05D000088 1.2e-11 74.7 306 27.8
Thecc.01G047200 Theobroma cacao HOM05D000395 ORTHO05D000088 1.2e-11 74.7 330 24.5
FvH4_6g38700 Fragaria vesca HOM05D000395 ORTHO05D000088 2.1e-11 73.9 304 24.7
FAN14G4811 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.1e-11 73.9 304 24.7
Gohir.A12G067300 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.4e-10 71.2 177 28.8
Duzib147G0434 Durio zibethinus HOM05D000395 ORTHO05D000088 1.8e-10 70.9 237 30.4
TWI09G1538 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 1.8e-10 70.9 165 29.7
CiPaw.01G027300 Carya illinoinensis HOM05D000395 ORTHO05D000088 2.3e-10 70.5 313 24.6
Gohir.D12G067900 Gossypium hirsutum HOM05D000395 ORTHO05D000088 4.0e-10 69.7 180 28.9
Gorai.008G071200 Gossypium raimondii HOM05D000395 ORTHO05D000088 4.0e-10 69.7 178 28.7
Gohir.D12G067800 Gossypium hirsutum HOM05D000395 ORTHO05D000088 5.2e-10 69.3 178 28.7
QL06p043901 Quercus lobata HOM05D000395 ORTHO05D000088 6.7e-10 68.9 326 24.2
Lj2A601G13 Lonicera japonica HOM05D000395 ORTHO05D000088 1.1e-09 68.2 316 23.7
Thecc.01G046900 Theobroma cacao HOM05D000395 ORTHO05D000088 1.5e-09 67.8 168 30.4
Gorai.007G209200 Gossypium raimondii HOM05D000395 ORTHO05D000088 2.6e-09 67.0 181 27.1
CiPaw.01G027200 Carya illinoinensis HOM05D000395 ORTHO05D000088 4.4e-09 66.2 177 31.1
Gorai.008G071300 Gossypium raimondii HOM05D000395 ORTHO05D000088 4.4e-09 66.2 180 27.8
CiPaw.01G027100 Carya illinoinensis HOM05D000395 ORTHO05D000088 7.5e-09 65.5 177 30.5
Gohir.D11G195300 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.3e-08 64.7 179 27.4
Lalb_Chr19g0126241 Lupinus albus HOM05D000395 ORTHO05D000088 1.3e-08 64.7 81 43.2
Psat6g097800 Pisum sativum HOM05D000395 ORTHO05D000088 1.7e-08 64.3 247 27.5
Potri.004G230100 Populus trichocarpa HOM05D000395 ORTHO05D000088 2.2e-08 63.9 307 25.1
FvH4_6g38690 Fragaria vesca HOM05D000395 ORTHO05D000088 2.8e-08 63.5 276 26.4
Gohir.A12G067500 Gossypium hirsutum HOM05D000395 ORTHO05D000088 2.8e-08 63.5 177 27.7
MD02G1160300 Malus domestica HOM05D000395 ORTHO05D000088 3.7e-08 63.2 307 24.8
Lalb_Chr19g0126231 Lupinus albus HOM05D000395 ORTHO05D000088 4.8e-08 62.8 84 40.5
Gohir.A11G188800 Gossypium hirsutum HOM05D000395 ORTHO05D000088 6.3e-08 62.4 181 26.5
Gohir.D03G019625 Gossypium hirsutum HOM05D000395 ORTHO05D000088 6.3e-08 62.4 178 29.8
Glyma.18G155000 Glycine max HOM05D000395 ORTHO05D000088 8.2e-08 62.0 75 40.0
TPR.G11170 Trifolium pratense HOM05D000395 ORTHO05D000088 8.2e-08 62.0 242 24.8
CANSAT01G3184 Cannabis sativa HOM05D000395 ORTHO05D000088 1.4e-07 61.2 165 25.5
Gohir.A10G093700 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.4e-07 61.2 281 23.5
Manes.07G115200 Manihot esculenta HOM05D000395 ORTHO05D000088 1.4e-07 61.2 275 25.5
TWI73G0729 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 2.4e-07 60.5 124 28.2
CiPaw.02G012600 Carya illinoinensis HOM05D000395 ORTHO05D000088 4.1e-07 59.7 80 41.2
Prupe.7G039600 Prunus persica HOM05D000395 ORTHO05D000088 4.1e-07 59.7 162 26.5
QL02p075828 Quercus lobata HOM05D000395 ORTHO05D000088 4.1e-07 59.7 290 23.4
Lalb_Chr17g0345311 Lupinus albus HOM05D000395 ORTHO05D000088 7.0e-07 58.9 82 36.6
RcHm_v2.0_Chr2g0103521 Rosa chinensis HOM05D000395 ORTHO05D000088 7.0e-07 58.9 79 41.8
Glyma.01G095166 Glycine max HOM05D000395 ORTHO05D000088 9.1e-07 58.5 46 54.3
Gorai.003G020100 Gossypium raimondii HOM05D000395 ORTHO05D000088 9.1e-07 58.5 179 26.8
Gorai.011G103800 Gossypium raimondii HOM05D000395 ORTHO05D000088 9.1e-07 58.5 281 22.4
MD02G1160000 Malus domestica HOM05D000395 ORTHO05D000088 9.1e-07 58.5 73 38.4
CANSAT01G0597 Cannabis sativa HOM05D000395 ORTHO05D000088 1.2e-06 58.2 88 31.8
Thecc.01G047000 Theobroma cacao HOM05D000395 ORTHO05D000088 1.2e-06 58.2 100 35.0
Gohir.D10G094400 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.6e-06 57.8 281 22.4
Manes.13G130950 Manihot esculenta HOM05D000395 ORTHO05D000088 1.6e-06 57.8 161 32.3
QL05p084622 Quercus lobata HOM05D000395 ORTHO05D000088 1.6e-06 57.8 71 40.8
QL05p084669 Quercus lobata HOM05D000395 ORTHO05D000088 1.6e-06 57.8 71 40.8
VMungo0720G0733 Vigna mungo HOM05D000212 ORTHO05D005509 1.6e-06 57.8 125 32.0
QL05p085016 Quercus lobata HOM05D000395 ORTHO05D000088 2.0e-06 57.4 71 40.8
Gorai.013G245600 Gossypium raimondii HOM05D000395 ORTHO05D000088 2.7e-06 57.0 277 23.5
Lj1g0016560 Lotus japonicus HOM05D000395 ORTHO05D000088 2.7e-06 57.0 78 37.2
Lj2g0004829 Lotus japonicus HOM05D000395 ORTHO05D000088 2.7e-06 57.0 77 41.6
RcHm_v2.0_Chr1g0343041 Rosa chinensis HOM05D000395 ORTHO05D000088 2.7e-06 57.0 305 23.9
Peaxi162Scf00234g00019 Petunia axillaris HOM05D000395 ORTHO05D000088 3.5e-06 56.6 65 43.1
TPR.G27879 Trifolium pratense HOM05D000395 ORTHO05D000088 3.5e-06 56.6 133 32.3
MSTRG.20125 Avicennia marina HOM05D000823 ORTHO05D000088 4.5e-06 56.2 62 41.9
MD02G1159800 Malus domestica HOM05D000395 ORTHO05D000088 4.5e-06 56.2 80 36.2
Eucgr.G01240 Eucalyptus grandis HOM05D000395 ORTHO05D000088 5.9e-06 55.8 165 27.9
Glyma.10G281300 Glycine max HOM05D000395 ORTHO05D000088 5.9e-06 55.8 142 27.5
Lj1g0005488 Lotus japonicus HOM05D000395 ORTHO05D000088 5.9e-06 55.8 49 49.0
Thecc.01G047100 Theobroma cacao HOM05D000395 ORTHO05D000088 5.9e-06 55.8 64 40.6
TWI09G0341 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 5.9e-06 55.8 127 31.5
CANSAT01G3124 Cannabis sativa HOM05D000395 ORTHO05D000088 7.7e-06 55.5 312 22.4
MD02G1159700 Malus domestica HOM05D000395 ORTHO05D000088 7.7e-06 55.5 78 33.3


User provided reference genes

Program Settings