Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 6.8e-289 996.5 463 100.0
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.1e-249 864.8 455 86.8
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 9.3e-246 853.2 436 88.3
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.1e-245 852.0 438 88.1
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.0e-244 849.7 449 86.0
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.0e-244 849.7 445 86.3
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 1.0e-244 849.7 438 87.9
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 1.7e-244 849.0 436 88.1
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 3.9e-244 847.8 436 87.6
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 5.1e-244 847.4 444 85.6
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 5.1e-244 847.4 445 86.3
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.9e-243 845.5 446 86.1
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 4.3e-243 844.3 449 86.0
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 1.3e-242 842.8 437 88.3
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 4.8e-242 840.9 449 86.9
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 1.8e-241 839.0 445 85.4
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 2.4e-241 838.6 434 86.9
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 2.4e-241 838.6 450 85.1
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 3.1e-241 838.2 445 85.4
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 4.0e-241 837.8 437 87.2
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 4.0e-241 837.8 456 83.3
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 2.0e-240 835.5 437 87.2
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 5.8e-240 833.9 437 86.7
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 7.6e-240 833.6 454 82.8
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 7.6e-240 833.6 448 84.8
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 2.9e-239 831.6 433 86.8
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 2.9e-239 831.6 447 84.3
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 2.9e-239 831.6 454 83.7
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 3.8e-239 831.2 433 86.1
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 6.4e-239 830.5 434 86.6
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 6.4e-239 830.5 469 82.3
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 8.4e-239 830.1 431 87.0
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.9e-238 828.9 440 84.3
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 1.9e-238 828.9 480 78.1
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 1.9e-238 828.9 480 78.1
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 2.4e-238 828.6 450 83.3
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 4.2e-238 827.8 443 84.4
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.2e-238 827.8 431 86.1
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 4.2e-238 827.8 447 83.7
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 7.1e-238 827.0 431 85.4
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 7.1e-238 827.0 437 85.4
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 9.3e-238 826.6 433 85.7
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 9.3e-238 826.6 433 85.7
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 9.3e-238 826.6 455 82.9
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 2.1e-237 825.5 431 86.8
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.7e-237 825.1 447 83.7
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 3.5e-237 824.7 431 86.5
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 3.5e-237 824.7 433 85.5
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 4.6e-237 824.3 433 85.7
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 6.0e-237 823.9 439 85.0
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 7.9e-237 823.5 447 83.9
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 1.0e-236 823.2 433 85.5
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 1.0e-236 823.2 445 83.8
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 1.0e-236 823.2 435 86.7
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 1.3e-236 822.8 431 86.1
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 1.3e-236 822.8 431 85.4
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.3e-236 822.8 431 86.1
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 8.7e-236 820.1 433 85.5
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 1.5e-235 819.3 431 85.4
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 1.9e-235 818.9 470 80.9
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 2.5e-235 818.5 431 85.8
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 2.5e-235 818.5 431 85.4
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 2.8e-234 815.1 431 85.6
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 3.7e-234 814.7 439 84.7
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 4.8e-234 814.3 431 84.9
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 6.2e-234 813.9 431 85.2
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.0e-232 808.9 439 83.4
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.0e-232 808.9 431 85.6
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 2.0e-232 808.9 431 85.6
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 2.6e-232 808.5 444 82.9
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 2.6e-232 808.5 431 84.5
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 3.4e-232 808.1 431 85.6
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 3.4e-232 808.1 438 84.5
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.0e-231 806.6 439 83.4
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 1.7e-231 805.8 440 82.7
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 2.2e-231 805.4 435 82.5
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 8.4e-231 803.5 469 78.5
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 1.9e-230 802.4 431 84.7
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 3.2e-230 801.6 451 81.4
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 6.0e-229 797.3 455 81.8
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 8.7e-228 793.5 460 80.4
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 8.7e-228 793.5 439 82.0
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 7.4e-227 790.4 441 81.9
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.6e-224 781.9 442 81.0
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 2.5e-219 765.4 450 76.9
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 1.6e-218 762.7 449 76.6
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 3.1e-217 758.4 402 86.8
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 5.3e-217 757.7 435 79.3
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 2.6e-216 755.4 472 75.0
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 1.7e-210 736.1 448 75.4
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 4.8e-210 734.6 398 83.9
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.8e-209 732.6 445 75.3
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 2.6e-208 728.8 434 76.0
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 9.1e-201 703.7 397 79.8
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 5.0e-199 698.0 433 72.7
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 1.1e-195 686.8 433 74.1
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.2e-192 676.8 437 74.4
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 6.5e-191 671.0 420 71.7
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 8.5e-191 670.6 455 68.8
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.4e-187 658.7 406 76.4
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 4.9e-178 628.2 433 66.5
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.7e-170 603.2 320 85.0
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 2.9e-170 602.4 302 90.1
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 1.3e-162 577.0 303 85.8
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 2.4e-161 572.8 453 61.1
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 4.6e-160 568.5 376 72.6
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 1.2e-155 553.9 460 58.9
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 7.5e-155 551.2 279 88.2
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 3.2e-137 492.7 277 80.5
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 1.0e-82 311.6 196 76.0
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 9.1e-76 288.5 180 73.9
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 3.6e-72 276.6 411 44.0
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.4e-71 274.6 178 71.3
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.4e-70 270.0 132 89.4
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 1.2e-67 261.5 301 50.5
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.3e-66 258.1 133 86.5
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 3.6e-64 250.0 135 82.2
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 6.8e-63 245.7 216 57.4
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.2e-62 245.0 120 92.5
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 1.4e-60 238.0 140 75.7
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 6.6e-50 202.6 119 79.0
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 9.5e-49 198.7 114 73.7
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 1.4e-47 194.9 249 49.0
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.8e-31 141.4 86 75.6
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 3.9e-26 123.6 182 42.3
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 8.1e-24 115.9 62 82.3
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 6.9e-23 112.8 89 61.8
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.5e-22 111.7 70 72.9
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 4.4e-22 110.2 62 75.8
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.2e-20 104.0 105 49.5
BraA10t43231Z Brassica rapa HOM05D006017 ORTHO05D017343 3.6e-16 90.5 68 63.2
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 5.1e-10 70.1 65 53.8
Mapoly0432s0001 Marchantia polymorpha HOM05D019566 ORTHO05D017343 5.6e-09 66.6 43 67.4


User provided reference genes

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