Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 5.3e-48 194.1 105 100.0
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 2.1e-20 102.4 85 67.1
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 4.4e-18 94.7 82 64.6
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 2.8e-17 92.0 82 61.0
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 4.8e-17 91.3 87 60.9
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 4.8e-17 91.3 86 61.6
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 8.3e-17 90.5 84 61.9
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 8.3e-17 90.5 87 60.9
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 8.3e-17 90.5 82 63.4
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.1e-16 90.1 82 63.4
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 1.4e-16 89.7 86 57.0
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.8e-16 89.4 87 60.9
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.4e-16 89.0 82 62.2
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 3.1e-16 88.6 86 58.1
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 4.1e-16 88.2 83 62.7
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 7.0e-16 87.4 90 57.8
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 7.0e-16 87.4 84 59.5
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 9.1e-16 87.0 83 59.0
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 1.2e-15 86.7 84 61.9
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 2.0e-15 85.9 86 55.8
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 2.0e-15 85.9 65 69.2
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 2.7e-15 85.5 84 58.3
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 4.5e-15 84.7 70 57.1
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 7.7e-15 84.0 71 57.7
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 1.0e-14 83.6 83 61.4
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 1.7e-14 82.8 83 60.2
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 2.9e-14 82.0 80 55.0
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 3.8e-14 81.6 59 66.1
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 3.8e-14 81.6 59 64.4
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 5.0e-14 81.3 84 58.3
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 5.0e-14 81.3 58 63.8
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 1.5e-13 79.7 84 58.3
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 1.9e-13 79.3 82 54.9
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 1.9e-13 79.3 61 60.7
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 2.5e-13 79.0 75 58.7
Lj3g0018742 Lotus japonicus HOM05D008135 ORTHO05D010260 3.2e-13 78.6 83 54.2
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 3.2e-13 78.6 62 61.3
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 3.2e-13 78.6 57 66.7
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 4.2e-13 78.2 64 60.9
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 4.2e-13 78.2 57 66.7
Lalb_Chr25g0280561 Lupinus albus HOM05D008135 ORTHO05D010260 5.5e-13 77.8 81 55.6
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 7.2e-13 77.4 73 57.5
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 9.5e-13 77.0 74 59.5
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 1.2e-12 76.6 66 68.2
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 2.7e-12 75.5 73 57.5
Atru.chr1.3625 Acer truncatum HOM05D008135 ORTHO05D010260 8.0e-12 73.9 86 47.7
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 1.0e-11 73.6 83 49.4
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 1.0e-11 73.6 83 50.6
MELO3C024405.2 Cucumis melo HOM05D008135 ORTHO05D010260 1.4e-11 73.2 83 50.6
Sed0004354 Sechium edule HOM05D008135 ORTHO05D010260 1.8e-11 72.8 84 51.2
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 2.3e-11 72.4 50 68.0
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 3.0e-11 72.0 73 56.2
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 4.0e-11 71.6 78 50.0
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 1.2e-10 70.1 74 51.4
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 2.0e-10 69.3 75 50.7
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 4.4e-10 68.2 72 52.8
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 1.3e-09 66.6 60 56.7
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 2.2e-09 65.9 53 56.6
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 2.8e-09 65.5 65 55.4
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 4.9e-09 64.7 58 55.2
THA.LOC109116552 Tarenaya hassleriana HOM05D008135 ORTHO05D010260 7.0e-08 60.8 79 46.8
Aqoxy2G03851 Aquilegia oxysepala HOM05D008135 ORTHO05D010260 9.2e-08 60.5 63 52.4
Nn8g38941 Nelumbo nucifera HOM05D008135 ORTHO05D010260 3.5e-07 58.5 48 60.4
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 1.3e-06 56.6 87 42.5
Sc12g0009960 Simmondsia chinensis HOM05D008135 ORTHO05D010260 2.9e-06 55.5 57 50.9


User provided reference genes

Program Settings