Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc130.26 Carica papaya HOM05D005182 ORTHO05D006631 9.3e-83 310.1 148 100.0
Cpa.g.c28071.2 Carica papaya HOM05D005182 ORTHO05D006631 2.7e-53 212.2 115 87.8
Cpa.g.sc130.27 Carica papaya HOM05D005182 ORTHO05D006631 3.0e-49 198.7 114 85.1
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 1.3e-47 193.4 117 78.6
CANSAT64G2419 Cannabis sativa HOM05D005182 ORTHO05D006631 1.1e-46 190.3 117 76.9
Actinidia06755 Actinidia chinensis HOM05D005182 ORTHO05D006631 3.1e-46 188.7 114 78.1
CiPaw.02G035100 Carya illinoinensis HOM05D005182 ORTHO05D006631 5.4e-46 188.0 117 76.9
Sabra01G0148000 Salix brachista HOM05D005182 ORTHO05D006631 7.0e-46 187.6 108 83.3
Potri.001G178800 Populus trichocarpa HOM05D005182 ORTHO05D006631 1.2e-45 186.8 108 82.4
Dinv35097 Davidia involucrata HOM05D005182 ORTHO05D006631 1.6e-45 186.4 112 78.6
Manes.17G115200 Manihot esculenta HOM05D005182 ORTHO05D006631 1.6e-45 186.4 112 79.5
Thecc.04G015200 Theobroma cacao HOM05D005182 ORTHO05D006631 1.6e-45 186.4 116 75.0
Ciclev10016757m.g Citrus clementina HOM05D005182 ORTHO05D006631 2.0e-45 186.0 110 79.1
Cfa007391 Carpinus fangiana HOM05D005182 ORTHO05D006631 1.0e-44 183.7 119 74.8
Nn3g16771 Nelumbo nucifera HOM05D005182 ORTHO05D006631 1.3e-44 183.3 112 77.7
RcHm_v2.0_Chr2g0173081 Rosa chinensis HOM05D005182 ORTHO05D006631 1.3e-44 183.3 113 77.0
Dinv33456 Davidia involucrata HOM05D005182 ORTHO05D006631 1.7e-44 183.0 125 74.4
QL02p075210 Quercus lobata HOM05D005182 ORTHO05D006631 2.9e-44 182.2 118 73.7
Cfa007386 Carpinus fangiana HOM05D005182 ORTHO05D006631 5.0e-44 181.4 119 73.9
Gohir.A07G222400 Gossypium hirsutum HOM05D005182 ORTHO05D006631 5.0e-44 181.4 113 76.1
ECA246G2600 Erigeron canadensis HOM05D005182 ORTHO05D006631 6.5e-44 181.0 112 78.6
TAR629G2348 Trochodendron aralioides HOM05D005182 ORTHO05D006631 6.5e-44 181.0 112 77.7
Atru.chr6.2358 Acer truncatum HOM05D005182 ORTHO05D006631 1.1e-43 180.3 111 77.5
Gohir.D07G229100 Gossypium hirsutum HOM05D005182 ORTHO05D006631 1.1e-43 180.3 116 72.4
Gorai.001G264200 Gossypium raimondii HOM05D005182 ORTHO05D006631 1.1e-43 180.3 116 72.4
MD09G1028700 Malus domestica HOM05D005182 ORTHO05D006631 1.1e-43 180.3 113 76.1
Haze_14718 Corylus avellana HOM05D005182 ORTHO05D006631 1.5e-43 179.9 119 73.9
DCAR_011246 Daucus carota HOM05D005182 ORTHO05D006631 1.5e-43 179.9 107 80.4
COL.COLO4_29086 Corchorus olitorius HOM05D005182 ORTHO05D006631 1.9e-43 179.5 116 71.6
Eucgr.J02232 Eucalyptus grandis HOM05D005182 ORTHO05D006631 2.5e-43 179.1 108 77.8
MBI16_g14596_MAGBIO Magnolia biondii HOM05D005182 ORTHO05D006631 4.2e-43 178.3 117 73.5
MD17G1030300 Malus domestica HOM05D005182 ORTHO05D006631 7.2e-43 177.6 118 73.7
CSS0002021 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 9.5e-43 177.2 112 75.0
MSTRG.3153 Avicennia marina HOM05D005182 ORTHO05D006631 2.1e-42 176.0 118 72.0
HanXRQChr17g0548351 Helianthus annuus HOM05D005182 ORTHO05D006631 2.8e-42 175.6 112 75.9
Aa31LG10G4000 Aethionema arabicum HOM05D005182 ORTHO05D006631 3.6e-42 175.3 112 75.0
Sopen02g031300 Solanum pennellii HOM05D005182 ORTHO05D006631 3.6e-42 175.3 111 76.6
vmacro04855 Vaccinium macrocarpon HOM05D005182 ORTHO05D006631 3.6e-42 175.3 121 71.9
PGR024G0002 Punica granatum HOM05D005182 ORTHO05D006631 4.7e-42 174.9 122 70.5
AL1G57790 Arabidopsis lyrata HOM05D005182 ORTHO05D006631 6.1e-42 174.5 112 74.1
CARHR040200 Cardamine hirsuta HOM05D005182 ORTHO05D006631 1.4e-41 173.3 112 73.2
TWI12G0687 Tripterygium wilfordii HOM05D005182 ORTHO05D006631 1.8e-41 172.9 111 73.9
Solyc02g086560.3 Solanum lycopersicum HOM05D005182 ORTHO05D006631 2.3e-41 172.6 111 75.7
Aqoxy3G02839 Aquilegia oxysepala HOM05D005182 ORTHO05D006631 3.0e-41 172.2 112 73.2
CAN.G1799.12 Capsicum annuum HOM05D005182 ORTHO05D006631 3.0e-41 172.2 112 73.2
Prupe.3G289500 Prunus persica HOM05D005182 ORTHO05D006631 4.0e-41 171.8 113 72.6
PGSC0003DMG400000477 Solanum tuberosum HOM05D005182 ORTHO05D006631 4.0e-41 171.8 112 75.0
SGA_v2.0_scaffold481G52321 Striga asiatica HOM05D005182 ORTHO05D006631 4.0e-41 171.8 106 74.5
Carub.0001s3930 Capsella rubella HOM05D005182 ORTHO05D006631 5.2e-41 171.4 112 73.2
SalBow1G7073 Salvia bowleyana HOM05D005182 ORTHO05D006631 6.8e-41 171.0 106 77.4
MELO3C021568.2 Cucumis melo HOM05D005182 ORTHO05D006631 8.9e-41 170.6 105 76.2
THA.LOC104801894 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 8.9e-41 170.6 114 69.3
Lj2g0004707 Lotus japonicus HOM05D005182 ORTHO05D006631 1.2e-40 170.2 106 74.5
Nitab4.5_0002682g0020 Nicotiana tabacum HOM05D005182 ORTHO05D006631 1.2e-40 170.2 112 75.0
TPR.G14069 Trifolium pratense HOM05D005182 ORTHO05D006631 1.2e-40 170.2 106 77.4
ATR0661G518 Amborella trichopoda HOM05D005182 ORTHO05D006631 2.0e-40 169.5 111 68.5
AUR62024784 Chenopodium quinoa HOM05D005182 ORTHO05D006631 2.0e-40 169.5 111 70.3
AUR62032437 Chenopodium quinoa HOM05D005182 ORTHO05D006631 2.0e-40 169.5 111 70.3
Psat1g190920 Pisum sativum HOM05D005182 ORTHO05D006631 2.0e-40 169.5 106 77.4
A08p03300 Brassica napus HOM05D005182 ORTHO05D006631 2.6e-40 169.1 108 72.2
FAN21G0797 Fragaria x ananassa HOM05D005182 ORTHO05D006631 2.6e-40 169.1 112 71.4
Cc07_g01870 Coffea canephora HOM05D005182 ORTHO05D006631 3.4e-40 168.7 111 70.3
Thhalv10011756m.g Eutrema salsugineum HOM05D005182 ORTHO05D006631 3.4e-40 168.7 106 74.5
PGR142G3360 Punica granatum HOM05D005182 ORTHO05D006631 3.4e-40 168.7 122 69.7
CsaV3_5G027220 Cucumis sativus L. HOM05D005182 ORTHO05D006631 4.4e-40 168.3 105 74.3
AT1G50170 Arabidopsis thaliana HOM05D005182 ORTHO05D006631 5.7e-40 167.9 112 71.4
Nitab4.5_0005432g0010 Nicotiana tabacum HOM05D005182 ORTHO05D006631 5.7e-40 167.9 112 73.2
THA.LOC104807109 Tarenaya hassleriana HOM05D005182 ORTHO05D006631 5.7e-40 167.9 114 69.3
VMungo0464G0237 Vigna mungo HOM05D005182 ORTHO05D006631 5.7e-40 167.9 116 72.4
Sp1g37040 Schrenkiella parvula HOM05D005182 ORTHO05D006631 7.5e-40 167.5 112 70.5
Medtr6g005390 Medicago truncatula HOM05D005182 ORTHO05D006631 1.3e-39 166.8 106 75.5
C03p89510 Brassica napus HOM05D005182 ORTHO05D006631 1.7e-39 166.4 108 72.2
BolC3t21265H Brassica oleracea HOM05D005182 ORTHO05D006631 1.7e-39 166.4 108 72.2
Peaxi162Scf00304g01217 Petunia axillaris HOM05D005182 ORTHO05D006631 1.7e-39 166.4 112 71.4
Sed0010591 Sechium edule HOM05D005182 ORTHO05D006631 1.7e-39 166.4 116 69.0
Peaxi162Scf00129g01422 Petunia axillaris HOM05D005182 ORTHO05D006631 2.2e-39 166.0 112 70.5
Rhsim02G0095200 Rhododendron simsii HOM05D005182 ORTHO05D006631 2.2e-39 166.0 127 65.4
BraA08t32363Z Brassica rapa HOM05D005182 ORTHO05D006631 2.8e-39 165.6 108 71.3
FvH4_3g28470 Fragaria vesca HOM05D005182 ORTHO05D006631 3.7e-39 165.2 111 72.1
FAN11G2673 Fragaria x ananassa HOM05D005182 ORTHO05D006631 3.7e-39 165.2 111 72.1
EL10Ac2g02464 Beta vulgaris HOM05D005182 ORTHO05D006631 4.9e-39 164.9 111 68.5
arahy.Tifrunner.gnm1.ann1.NIKC7C Arachis hypogaea HOM05D005182 ORTHO05D006631 6.3e-39 164.5 111 68.5
CDE06G0683 Ceratophyllum demersum HOM05D005182 ORTHO05D006631 6.3e-39 164.5 130 62.3
Glyma.05G004900 Glycine max HOM05D005182 ORTHO05D006631 6.3e-39 164.5 106 73.6
Phvul.004G010800 Phaseolus vulgaris HOM05D005182 ORTHO05D006631 6.3e-39 164.5 106 73.6
Hund03875 Selenicereus undatus HOM05D005182 ORTHO05D006631 1.1e-38 163.7 106 68.9
Ca_04172_v3 Cicer arietinum L. HOM05D005182 ORTHO05D006631 1.4e-38 163.3 106 75.5
SHI25748 Sapria himalayana HOM05D005182 ORTHO05D006631 2.0e-37 159.5 111 66.7
SEGI_02514 Sequoiadendron giganteum HOM05D005182 ORTHO05D006631 2.0e-37 159.5 123 59.3
Zm00001eb072570 Zea mays HOM05D005182 ORTHO05D006631 1.3e-36 156.8 108 66.7
Migut.H00088 Erythranthe guttata HOM05D005182 ORTHO05D006631 5.0e-36 154.8 105 74.3
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 1.1e-35 153.7 113 66.4
Medtr6g005410 Medicago truncatula HOM05D005182 ORTHO05D006631 1.5e-35 153.3 106 67.0
CiPaw.03G042000 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.2e-34 150.2 117 67.5
Rhsim09G0149800 Rhododendron simsii HOM05D005182 ORTHO05D006631 3.6e-34 148.7 113 65.5
GSVIVG01032428001 Vitis vinifera HOM05D005182 ORTHO05D006631 3.6e-34 148.7 89 79.8
Mapoly0034s0026 Marchantia polymorpha HOM05D005182 ORTHO05D006631 6.1e-34 147.9 108 62.0
SMO356G0462 Selaginella moellendorffii HOM05D005182 ORTHO05D006631 1.0e-33 147.1 119 58.0
Hma1.2p1_1291F.1_g273570 Hydrangea macrophylla HOM05D005182 ORTHO05D006631 3.0e-33 145.6 89 78.7
Oeu057055.1 Olea europaea HOM05D005182 ORTHO05D006631 8.9e-33 144.1 89 74.2
Psat1g058400 Pisum sativum HOM05D005182 ORTHO05D006631 6.4e-31 137.9 106 63.2
Sed0025592 Sechium edule HOM05D005182 ORTHO05D006631 1.1e-30 137.1 105 65.7
ClCG00G002150 Citrullus lanatus HOM05D005182 ORTHO05D006631 1.9e-30 136.3 105 65.7
ClCG09G019170 Citrullus lanatus HOM05D005182 ORTHO05D006631 1.9e-30 136.3 105 65.7
Pp3c3_11190 Physcomitrium patens HOM05D005182 ORTHO05D006631 2.4e-30 136.0 109 56.0
unitig_746.g26550 Utricularia gibba HOM05D005182 ORTHO05D006631 1.2e-29 133.7 89 71.9
CBR_g4824 Chara braunii HOM05D005182 ORTHO05D006631 1.6e-29 133.3 105 63.8
arahy.Tifrunner.gnm1.ann1.1JMX4I Arachis hypogaea HOM05D005182 ORTHO05D006631 2.7e-29 132.5 111 62.2
MCO08G118 Micromonas commoda HOM05D005182 ORTHO05D006631 2.7e-29 132.5 104 62.5
Sc19g0005880 Simmondsia chinensis HOM05D005182 ORTHO05D006631 1.7e-28 129.8 80 73.8
MSTRG.15523 Avicennia marina HOM05D005182 ORTHO05D006631 5.0e-28 128.3 84 70.2
Psat1g058360 Pisum sativum HOM05D005182 ORTHO05D006631 5.0e-28 128.3 106 59.4
RcHm_v2.0_Chr1g0351301 Rosa chinensis HOM05D005182 ORTHO05D006631 1.5e-27 126.7 113 57.5
arahy.Tifrunner.gnm1.ann1.0YQ56L Arachis hypogaea HOM05D005182 ORTHO05D006631 4.3e-27 125.2 82 69.5
Cpa.g.sc171.39 Carica papaya HOM05D005182 ORTHO05D006631 1.5e-24 116.7 66 84.8
Duzib187G0244 Durio zibethinus HOM05D005182 ORTHO05D006631 3.2e-22 109.0 66 80.3
EL10Ac6g14578 Beta vulgaris HOM05D002842 ORTHO05D003177 5.4e-22 108.2 72 70.8
QL09p000526 Quercus lobata HOM05D005182 ORTHO05D006631 5.4e-22 108.2 67 76.1
BcaC01g01215 Brassica carinata HOM05D005182 ORTHO05D006631 9.2e-22 107.5 108 51.9
CiPaw.02G035200 Carya illinoinensis HOM05D005182 ORTHO05D006631 1.2e-21 107.1 65 78.5
EL10Ac5g10908 Beta vulgaris HOM05D005182 ORTHO05D006631 1.6e-21 106.7 72 69.4
Cre04.g214100 Chlamydomonas reinhardtii HOM05D005182 ORTHO05D006631 1.6e-21 106.7 111 45.0
EL10Ac6g13785 Beta vulgaris HOM05D005182 ORTHO05D006631 3.5e-21 105.5 72 69.4
Glyma.17G203751 Glycine max HOM05D005182 ORTHO05D006631 7.8e-21 104.4 73 63.0
FAN05G5577 Fragaria x ananassa HOM05D005182 ORTHO05D006631 5.1e-20 101.7 88 58.0
FvH4_6g51400 Fragaria vesca HOM05D005182 ORTHO05D006631 2.5e-19 99.4 88 58.0
FAN14G1378 Fragaria x ananassa HOM05D005182 ORTHO05D006631 2.5e-19 99.4 88 58.0
Os02g0296800 Oryza sativa ssp. japonica HOM05D005182 ORTHO05D006631 1.6e-18 96.7 73 60.3
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 1.1e-17 94.0 77 57.1
Prupe.3G207400 Prunus persica HOM05D005182 ORTHO05D006631 3.1e-17 92.4 83 59.0
AagrBONN_evm.TU.Sc2ySwM_228.389 Anthoceros agrestis HOM05D005182 ORTHO05D006631 6.8e-17 91.3 85 49.4
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 1.2e-16 90.5 67 64.2
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 7.5e-16 87.8 56 73.2
Ah.12g060430 Amaranthus hybridus HOM05D005182 ORTHO05D006631 2.2e-15 86.3 106 44.3
PRCOL_00005828 Prasinoderma coloniale HOM05D005182 ORTHO05D006631 7.8e-13 77.8 67 55.2
Zm00001eb085260 Zea mays HOM05D005182 ORTHO05D006631 1.1e-09 67.4 46 65.2
Prupe.3G289700 Prunus persica HOM05D005182 ORTHO05D006631 2.6e-08 62.8 39 69.2


User provided reference genes

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