Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc130.24 Carica papaya HOM05D005499 ORTHO05D006666 1.0e-67 260.0 134 100.0
Dinv33378 Davidia involucrata HOM05D005499 ORTHO05D006666 8.3e-54 213.8 134 82.1
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla HOM05D005499 ORTHO05D006666 1.1e-53 213.4 134 82.8
TWI36G0940 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 1.8e-53 212.6 134 82.1
Oeu003270.1 Olea europaea HOM05D005499 ORTHO05D006666 3.1e-53 211.8 134 82.8
TAR371G0544 Trochodendron aralioides HOM05D005499 ORTHO05D006666 1.2e-52 209.9 134 81.3
CiPaw.03G051000 Carya illinoinensis HOM05D005499 ORTHO05D006666 2.0e-52 209.1 134 82.1
Eucgr.J02294 Eucalyptus grandis HOM05D005499 ORTHO05D006666 2.0e-52 209.1 134 79.1
Lalb_Chr21g0317581 Lupinus albus HOM05D005499 ORTHO05D006666 2.0e-52 209.1 134 82.8
Thecc.04G028500 Theobroma cacao HOM05D005499 ORTHO05D006666 4.5e-52 208.0 134 82.8
Atru.chr6.2492 Acer truncatum HOM05D005499 ORTHO05D006666 7.7e-52 207.2 134 79.1
Rhsim10G0010400 Rhododendron simsii HOM05D005499 ORTHO05D006666 7.7e-52 207.2 134 82.1
Duzib264G0656 Durio zibethinus HOM05D005499 ORTHO05D006666 1.7e-51 206.1 134 82.8
Lalb_Chr02g0157891 Lupinus albus HOM05D005499 ORTHO05D006666 1.7e-51 206.1 134 82.1
Haze_14820 Corylus avellana HOM05D005499 ORTHO05D006666 3.8e-51 204.9 134 79.1
COL.COLO4_29287 Corchorus olitorius HOM05D005499 ORTHO05D006666 6.5e-51 204.1 134 82.1
QL02p072772 Quercus lobata HOM05D005499 ORTHO05D006666 6.5e-51 204.1 133 78.2
Duzib187G1007 Durio zibethinus HOM05D005499 ORTHO05D006666 8.5e-51 203.8 134 82.8
Gorai.012G089400 Gossypium raimondii HOM05D005499 ORTHO05D006666 8.5e-51 203.8 134 82.1
Ciclev10017154m.g Citrus clementina HOM05D005499 ORTHO05D006666 1.1e-50 203.4 134 79.1
Glyma.05G073700 Glycine max HOM05D005499 ORTHO05D006666 1.5e-50 203.0 134 79.9
Glyma.19G077100 Glycine max HOM05D005499 ORTHO05D006666 1.9e-50 202.6 134 79.9
TWI56G1275 Tripterygium wilfordii HOM05D005499 ORTHO05D006666 1.9e-50 202.6 128 82.0
VMungo0464G1619 Vigna mungo HOM05D005499 ORTHO05D006666 2.5e-50 202.2 134 78.4
CSS0020557 Camellia sinensis var. sinensis HOM05D005499 ORTHO05D006666 3.2e-50 201.8 134 78.4
Psat1g031800 Pisum sativum HOM05D005499 ORTHO05D006666 4.2e-50 201.4 134 76.9
HanXRQChr01g0030421 Helianthus annuus HOM05D005499 ORTHO05D006666 5.5e-50 201.1 134 82.8
Lj6g0007933 Lotus japonicus HOM05D005499 ORTHO05D006666 9.4e-50 200.3 134 77.6
Prupe.6G125800 Prunus persica HOM05D005499 ORTHO05D006666 9.4e-50 200.3 134 76.1
TPR.G3708 Trifolium pratense HOM05D005499 ORTHO05D006666 9.4e-50 200.3 134 77.6
Aqoxy5G03538 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 1.2e-49 199.9 134 76.9
MBI11_g21381_MAGBIO Magnolia biondii HOM05D005499 ORTHO05D006666 1.2e-49 199.9 134 76.1
Potri.001G335600 Populus trichocarpa HOM05D005499 ORTHO05D006666 1.2e-49 199.9 134 79.1
Cfa007270 Carpinus fangiana HOM05D005499 ORTHO05D006666 1.6e-49 199.5 134 76.9
Manes.15G156800 Manihot esculenta HOM05D005499 ORTHO05D006666 2.1e-49 199.1 134 78.4
Gohir.D04G079400 Gossypium hirsutum HOM05D005499 ORTHO05D006666 8.0e-49 197.2 134 79.9
TAR629G1334 Trochodendron aralioides HOM05D005499 ORTHO05D006666 8.0e-49 197.2 134 76.9
Gohir.D10G084868 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.0e-48 196.8 134 79.9
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea HOM05D005499 ORTHO05D006666 1.8e-48 196.1 134 77.6
Gorai.011G092800 Gossypium raimondii HOM05D005499 ORTHO05D006666 2.3e-48 195.7 134 79.1
Sabra16G0216600 Salix brachista HOM05D005499 ORTHO05D006666 4.0e-48 194.9 134 77.6
Migut.K01440 Erythranthe guttata HOM05D005499 ORTHO05D006666 5.2e-48 194.5 129 79.8
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea HOM05D005499 ORTHO05D006666 6.8e-48 194.1 134 76.9
ECA238G0236 Erigeron canadensis HOM05D005499 ORTHO05D006666 6.8e-48 194.1 134 80.6
Phvul.003G262000 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 6.8e-48 194.1 134 76.9
PSO478G5160 Papaver somniferum HOM05D005499 ORTHO05D006666 1.2e-47 193.4 134 76.9
RcHm_v2.0_Chr3g0449841 Rosa chinensis HOM05D005499 ORTHO05D006666 1.2e-47 193.4 134 77.6
Ca_25364_v3 Cicer arietinum L. HOM05D005499 ORTHO05D006666 2.0e-47 192.6 135 75.6
Cc10_g08070 Coffea canephora HOM05D005499 ORTHO05D006666 2.0e-47 192.6 134 76.9
FAN05G0237 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-47 192.6 138 76.8
FAN05G2282 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-47 192.6 138 76.8
FvH4_6g02050 Fragaria vesca HOM05D005499 ORTHO05D006666 2.6e-47 192.2 138 76.8
FAN05G1403 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.6e-47 192.2 138 76.8
FAN09G0379 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.6e-47 192.2 138 76.8
FAN14G4216 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.6e-47 192.2 138 76.8
Nn4g24319 Nelumbo nucifera HOM05D005499 ORTHO05D006666 4.4e-47 191.4 134 74.6
SGA_v2.0_scaffold47G17558 Striga asiatica HOM05D005499 ORTHO05D006666 4.4e-47 191.4 134 77.6
FAN05G4095 Fragaria x ananassa HOM05D005499 ORTHO05D006666 5.7e-47 191.0 138 76.1
Medtr6g078300 Medicago truncatula HOM05D005499 ORTHO05D006666 5.7e-47 191.0 135 75.6
PSO782G3924 Papaver somniferum HOM05D005499 ORTHO05D006666 5.7e-47 191.0 134 76.1
SalBow7G4317 Salvia bowleyana HOM05D005499 ORTHO05D006666 5.7e-47 191.0 129 76.0
Actinidia05936 Actinidia chinensis HOM05D005499 ORTHO05D006666 7.5e-47 190.7 134 77.6
Sc10g0004570 Simmondsia chinensis HOM05D005499 ORTHO05D006666 7.5e-47 190.7 134 71.6
DCAR_011296 Daucus carota HOM05D005499 ORTHO05D006666 9.8e-47 190.3 134 73.9
Phvul.003G138900 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 9.8e-47 190.3 134 76.9
Phvul.003G139152 Phaseolus vulgaris HOM05D005499 ORTHO05D006666 9.8e-47 190.3 134 76.9
MSTRG.3267 Avicennia marina HOM05D005499 ORTHO05D006666 1.3e-46 189.9 125 80.0
Gohir.A10G160300 Gossypium hirsutum HOM05D005499 ORTHO05D006666 1.3e-46 189.9 108 92.6
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.3e-46 189.9 134 73.1
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 3.7e-46 188.3 134 72.4
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 3.7e-46 188.3 134 72.4
AUR62013851 Chenopodium quinoa HOM05D005499 ORTHO05D006666 6.3e-46 187.6 134 72.4
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.1e-45 186.8 134 71.6
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 1.1e-45 186.8 128 75.0
CANSAT11G2604 Cannabis sativa HOM05D005499 ORTHO05D006666 1.4e-45 186.4 134 74.6
AUR62036750 Chenopodium quinoa HOM05D005499 ORTHO05D006666 4.1e-45 184.9 134 71.6
ClCG04G001400 Citrullus lanatus HOM05D005499 ORTHO05D006666 4.1e-45 184.9 136 75.0
FAN14G1883 Fragaria x ananassa HOM05D005499 ORTHO05D006666 4.1e-45 184.9 137 76.6
FvH4_4g13440 Fragaria vesca HOM05D005499 ORTHO05D006666 7.0e-45 184.1 138 73.2
FAN12G0501 Fragaria x ananassa HOM05D005499 ORTHO05D006666 7.0e-45 184.1 138 73.2
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 7.0e-45 184.1 134 70.9
AL3G10400 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 1.6e-44 183.0 110 82.7
FAN14G2627 Fragaria x ananassa HOM05D005499 ORTHO05D006666 2.0e-44 182.6 137 75.9
Medtr4g073700 Medicago truncatula HOM05D005499 ORTHO05D006666 2.7e-44 182.2 134 73.9
unitig_32.g10669 Utricularia gibba HOM05D005499 ORTHO05D006666 2.7e-44 182.2 127 75.6
Aqoxy3G01444 Aquilegia oxysepala HOM05D005499 ORTHO05D006666 3.5e-44 181.8 131 77.9
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 5.9e-44 181.0 134 70.9
Ah.00g000560 Amaranthus hybridus HOM05D005499 ORTHO05D006666 1.7e-43 179.5 134 70.9
Carub.0003s0032 Capsella rubella HOM05D005499 ORTHO05D006666 3.8e-43 178.3 110 80.9
Sed0019428 Sechium edule HOM05D005499 ORTHO05D006666 5.0e-43 177.9 135 71.1
Psat7g172960 Pisum sativum HOM05D005499 ORTHO05D006666 6.6e-43 177.6 134 71.6
HPP92_006243 Vanilla planifolia HOM05D005499 ORTHO05D006666 6.6e-43 177.6 128 72.7
Lsat_1_v5_gn_3_10761 Lactuca sativa HOM05D005499 ORTHO05D006666 1.1e-42 176.8 138 71.0
MELO3C008981.2 Cucumis melo HOM05D005499 ORTHO05D006666 1.9e-42 176.0 134 71.6
CARHR199040 Cardamine hirsuta HOM05D005499 ORTHO05D006666 4.2e-42 174.9 120 76.7
Hund13392 Selenicereus undatus HOM05D005499 ORTHO05D006666 4.2e-42 174.9 134 70.9
Aa31LG5G10870 Aethionema arabicum HOM05D005499 ORTHO05D006666 1.2e-41 173.3 110 80.9
CsaV3_4G031040 Cucumis sativus L. HOM05D005499 ORTHO05D006666 1.2e-41 173.3 133 71.4
A03p32370 Brassica napus HOM05D005499 ORTHO05D006666 1.6e-41 172.9 110 80.9
C03p39430 Brassica napus HOM05D005499 ORTHO05D006666 1.6e-41 172.9 110 80.9
BolC3t16211H Brassica oleracea HOM05D005499 ORTHO05D006666 1.6e-41 172.9 110 80.9
BraA03t12407Z Brassica rapa HOM05D005499 ORTHO05D006666 1.6e-41 172.9 110 80.9
EL10Ac2g02820 Beta vulgaris HOM05D005499 ORTHO05D006666 2.1e-41 172.6 134 70.1
Gohir.A05G341200 Gossypium hirsutum HOM05D005499 ORTHO05D006666 3.6e-41 171.8 134 71.6
Thhalv10014999m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.0e-40 170.2 110 80.0
QL05p048106 Quercus lobata HOM05D005499 ORTHO05D006666 2.3e-40 169.1 130 70.8
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 1.2e-39 166.8 134 64.9
AT3G01740 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 1.5e-39 166.4 110 76.4
Cc07_g00480 Coffea canephora HOM05D005499 ORTHO05D006666 2.0e-39 166.0 134 67.9
PSO782G2325 Papaver somniferum HOM05D005499 ORTHO05D006666 7.5e-39 164.1 121 71.1
CARHR075180 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.7e-38 162.9 92 87.0
THA.LOC104822403 Tarenaya hassleriana HOM05D005499 ORTHO05D006666 2.9e-38 162.2 132 67.4
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 6.4e-38 161.0 134 62.7
Sp3g00320 Schrenkiella parvula HOM05D005499 ORTHO05D006666 5.4e-37 157.9 92 83.7
AT5G14290 Arabidopsis thaliana HOM05D005499 ORTHO05D006666 1.2e-36 156.8 110 72.7
CARHR105740 Cardamine hirsuta HOM05D005499 ORTHO05D006666 3.5e-36 155.2 112 74.1
Os12g0244200 Oryza sativa ssp. japonica HOM05D005499 ORTHO05D006666 7.8e-36 154.1 134 64.2
AL6G24990 Arabidopsis lyrata HOM05D005499 ORTHO05D006666 1.7e-35 152.9 100 77.0
Thhalv10021760m.g Eutrema salsugineum HOM05D005499 ORTHO05D006666 1.7e-35 152.9 113 72.6
ATR1098G108 Amborella trichopoda HOM05D005499 ORTHO05D006666 3.3e-34 148.7 116 71.6
FAN21G0236 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.6e-33 145.2 126 64.3
SHI11403 Sapria himalayana HOM05D005499 ORTHO05D006666 4.7e-33 144.8 134 59.7
Zm00001eb328460 Zea mays HOM05D005499 ORTHO05D006666 6.2e-33 144.4 134 59.7
Sed0018883 Sechium edule HOM05D005499 ORTHO05D006666 9.8e-31 137.1 93 74.2
Nn1g08773 Nelumbo nucifera HOM05D005499 ORTHO05D006666 3.7e-30 135.2 120 64.2
SEGI_30393 Sequoiadendron giganteum HOM05D005499 ORTHO05D006666 7.0e-29 131.0 104 65.4
Gohir.1Z049635 Gossypium hirsutum HOM05D005499 ORTHO05D006666 2.3e-27 125.9 92 73.9
FAN02G3728 Fragaria x ananassa HOM05D005499 ORTHO05D006666 3.7e-22 108.6 57 89.5
CBR_g38683 Chara braunii HOM05D005499 ORTHO05D006666 5.4e-21 104.8 110 51.8
Pp3c26_11040 Physcomitrium patens HOM05D005499 ORTHO05D006666 2.3e-19 99.4 92 54.3
Mapoly0005s0032 Marchantia polymorpha HOM05D005499 ORTHO05D006666 3.9e-19 98.6 110 50.0
SMO164G0004 Selaginella moellendorffii HOM05D005499 ORTHO05D006666 5.6e-18 94.7 110 47.3
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis HOM05D005499 ORTHO05D006666 8.1e-17 90.9 126 44.4
CARHR266370 Cardamine hirsuta HOM05D005499 ORTHO05D006666 1.8e-16 89.7 52 80.8
Dinv24762 Davidia involucrata HOM05D003270 ORTHO05D003662 4.4e-15 85.1 69 65.2
Actinidia36173 Actinidia chinensis HOM05D005499 ORTHO05D006666 1.6e-12 76.6 82 56.1
TAR374G0914 Trochodendron aralioides HOM05D005499 ORTHO05D006666 3.5e-12 75.5 93 50.5
MCO16G647 Micromonas commoda HOM05D005499 ORTHO05D006666 1.7e-11 73.2 125 36.0
Cre12.g546000 Chlamydomonas reinhardtii HOM05D005499 ORTHO05D006666 3.3e-10 68.9 99 40.4
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 4.7e-09 65.1 68 58.8
Dinv25304 Davidia involucrata HOM05D000009 ORTHO05D000008 1.3e-06 57.0 54 59.3


User provided reference genes

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