Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc13.59 Carica papaya HOM05D000030 ORTHO05D009563 7.3e-46 186.8 91 100.0
Actinidia31034 Actinidia chinensis HOM05D005660 ORTHO05D009563 6.7e-31 137.1 88 77.3
RhsimUnG0106400 Rhododendron simsii HOM05D000030 ORTHO05D009563 4.3e-30 134.4 76 82.9
Sp1g16510 Schrenkiella parvula HOM05D000030 ORTHO05D009563 4.3e-30 134.4 87 71.3
vmacro17683 Vaccinium macrocarpon HOM05D000030 ORTHO05D009563 7.4e-30 133.7 76 84.2
Thecc.03G027200 Theobroma cacao HOM05D000030 ORTHO05D009563 9.6e-30 133.3 88 76.1
CiPaw.15G125300 Carya illinoinensis HOM05D000030 ORTHO05D009563 2.1e-29 132.1 88 76.1
Dinv36894 Davidia involucrata HOM05D000030 ORTHO05D009563 3.7e-29 131.3 88 76.1
Duzib068G1203 Durio zibethinus HOM05D000030 ORTHO05D009563 3.7e-29 131.3 88 75.0
Manes.05G118100 Manihot esculenta HOM05D000030 ORTHO05D009563 4.8e-29 131.0 87 72.4
TWI81G0331 Tripterygium wilfordii HOM05D000030 ORTHO05D009563 1.1e-28 129.8 88 73.9
GSVIVG01008224001 Vitis vinifera HOM05D000030 ORTHO05D009563 1.1e-28 129.8 87 78.2
TWI15G1164 Tripterygium wilfordii HOM05D000030 ORTHO05D009563 1.4e-28 129.4 76 84.2
CSS0033246 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D009563 1.8e-28 129.0 76 84.2
Atru.chr9.734 Acer truncatum HOM05D000030 ORTHO05D009563 2.4e-28 128.6 76 80.3
Potri.012G059200 Populus trichocarpa HOM05D000030 ORTHO05D009563 3.1e-28 128.3 85 72.9
AT1G18560 Arabidopsis thaliana HOM05D000030 ORTHO05D009563 6.9e-28 127.1 87 71.3
ClCG02G014930 Citrullus lanatus HOM05D000030 ORTHO05D009563 6.9e-28 127.1 88 73.9
Ciclev10019100m.g Citrus clementina HOM05D000030 ORTHO05D009563 6.9e-28 127.1 76 80.3
Nn4g23693 Nelumbo nucifera HOM05D000030 ORTHO05D009563 6.9e-28 127.1 76 78.9
Sabra12G0040700 Salix brachista HOM05D000030 ORTHO05D009563 9.0e-28 126.7 85 71.8
Gohir.A11G007550 Gossypium hirsutum HOM05D000030 ORTHO05D009563 1.2e-27 126.3 88 72.7
Gohir.D11G008433 Gossypium hirsutum HOM05D000030 ORTHO05D009563 1.2e-27 126.3 88 72.7
Gorai.007G008000 Gossypium raimondii HOM05D000030 ORTHO05D009563 1.2e-27 126.3 88 72.7
AL1G31000 Arabidopsis lyrata HOM05D000030 ORTHO05D000031 1.5e-27 125.9 87 70.1
CiPaw.16G083300 Carya illinoinensis HOM05D000030 ORTHO05D009563 2.0e-27 125.6 88 75.0
MD06G1210000 Malus domestica HOM05D000030 ORTHO05D009563 2.0e-27 125.6 88 71.6
QL10p023146 Quercus lobata HOM05D000030 ORTHO05D009563 2.0e-27 125.6 90 72.2
Actinidia39804 Actinidia chinensis HOM05D000030 ORTHO05D009563 3.4e-27 124.8 88 71.6
Thhalv10006990m.g Eutrema salsugineum HOM05D000030 ORTHO05D009563 3.4e-27 124.8 87 69.0
Haze_18591 Corylus avellana HOM05D000030 ORTHO05D009563 4.5e-27 124.4 88 71.6
Haze_18592 Corylus avellana HOM05D000030 ORTHO05D009563 4.5e-27 124.4 88 71.6
Duzib084G1399 Durio zibethinus HOM05D000030 ORTHO05D009563 2.2e-26 122.1 74 78.4
COL.COLO4_22696 Corchorus olitorius HOM05D000030 ORTHO05D009563 2.9e-26 121.7 88 71.6
Carub.0001s1819 Capsella rubella HOM05D000030 ORTHO05D009563 3.8e-26 121.3 75 76.0
CARHR019180 Cardamine hirsuta HOM05D000030 ORTHO05D009563 6.5e-26 120.6 87 67.8
Prupe.5G216200 Prunus persica HOM05D000030 ORTHO05D009563 6.5e-26 120.6 88 70.5
Aa31LG7G3250 Aethionema arabicum HOM05D000030 ORTHO05D009563 8.4e-26 120.2 87 67.8
CANSAT80G1142 Cannabis sativa HOM05D000030 ORTHO05D009563 8.4e-26 120.2 90 72.2
RcHm_v2.0_Chr7g0184431 Rosa chinensis HOM05D000030 ORTHO05D009563 1.4e-25 119.4 91 68.1
MELO3C031531.2 Cucumis melo HOM05D000030 ORTHO05D009563 5.5e-25 117.5 73 82.2
THA.LOC104812116 Tarenaya hassleriana HOM05D000030 ORTHO05D009563 5.5e-25 117.5 86 68.6
Sed0016338 Sechium edule HOM05D000030 ORTHO05D009563 1.2e-24 116.3 90 68.9
Lj9C432T16 Lonicera japonica HOM05D000030 ORTHO05D009563 1.6e-24 115.9 90 67.8
Cc04_g07610 Coffea canephora HOM05D000030 ORTHO05D009563 3.5e-24 114.8 90 68.9
MBI16_g23749_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D009563 3.5e-24 114.8 88 63.6
PGR083G1920 Punica granatum HOM05D000030 ORTHO05D009563 3.5e-24 114.8 88 67.0
CsaV3_2G007070 Cucumis sativus L. HOM05D000030 ORTHO05D009563 1.3e-23 112.8 88 65.9
FvH4_5g12801 Fragaria vesca HOM05D000030 ORTHO05D009563 1.3e-23 112.8 90 67.8
Lsat_1_v5_gn_5_24240 Lactuca sativa HOM05D000030 ORTHO05D009563 1.3e-23 112.8 87 64.4
MSTRG.9564 Avicennia marina HOM05D000030 ORTHO05D009563 2.3e-23 112.1 90 67.8
Migut.D01584 Erythranthe guttata HOM05D000030 ORTHO05D009563 2.3e-23 112.1 89 66.3
ATR0598G059 Amborella trichopoda HOM05D000030 ORTHO05D009563 3.0e-23 111.7 76 71.1
Nitab4.5_0000410g0150 Nicotiana tabacum HOM05D000030 ORTHO05D009563 5.1e-23 110.9 94 60.6
AUR62032181 Chenopodium quinoa HOM05D000030 ORTHO05D009563 6.7e-23 110.5 76 73.7
Eucgr.B00689 Eucalyptus grandis HOM05D000030 ORTHO05D009563 8.7e-23 110.2 88 64.8
SGA_v2.0_scaffold168G38477 Striga asiatica HOM05D000030 ORTHO05D009563 1.5e-22 109.4 78 73.1
PSO063G1480 Papaver somniferum HOM05D000030 ORTHO05D009563 2.5e-22 108.6 76 72.4
EL10Ac5g11242 Beta vulgaris HOM05D000030 ORTHO05D009563 3.3e-22 108.2 76 69.7
AUR62036941 Chenopodium quinoa HOM05D000030 ORTHO05D009563 7.4e-22 107.1 76 71.1
HanXRQChr05g0157751 Helianthus annuus HOM05D000030 ORTHO05D009563 9.7e-22 106.7 87 60.9
CDE06G0266 Ceratophyllum demersum HOM05D000030 ORTHO05D009563 1.3e-21 106.3 67 79.1
Peaxi162Scf00015g00634 Petunia axillaris HOM05D000030 ORTHO05D009563 2.8e-21 105.1 92 60.9
A09p59880 Brassica napus HOM05D000030 ORTHO05D009563 3.7e-21 104.8 91 60.4
BraA09t41360Z Brassica rapa HOM05D000030 ORTHO05D009563 3.7e-21 104.8 91 60.4
Hund09994 Selenicereus undatus HOM05D000030 ORTHO05D009563 3.7e-21 104.8 82 65.9
C08p43280 Brassica napus HOM05D000030 ORTHO05D009563 4.8e-21 104.4 88 59.1
BolC8t51878H Brassica oleracea HOM05D000030 ORTHO05D009563 4.8e-21 104.4 88 59.1
Glyma.05G013900 Glycine max HOM05D000030 ORTHO05D009563 6.3e-21 104.0 75 70.7
VMungo1215G2945 Vigna mungo HOM05D000030 ORTHO05D009563 6.3e-21 104.0 75 72.0
ECA246G2413 Erigeron canadensis HOM05D000030 ORTHO05D009563 1.4e-20 102.8 88 62.5
Glyma.17G122200 Glycine max HOM05D000030 ORTHO05D009563 1.8e-20 102.4 75 69.3
Lj4g0007233 Lotus japonicus HOM05D000030 ORTHO05D009563 2.4e-20 102.1 73 71.2
Lalb_Chr13g0302391 Lupinus albus HOM05D000030 ORTHO05D009563 4.1e-20 101.3 85 65.9
MD14G1220900 Malus domestica HOM05D000030 ORTHO05D009563 4.1e-20 101.3 68 75.0
Nitab4.5_0003716g0090 Nicotiana tabacum HOM05D000030 ORTHO05D009563 1.5e-19 99.4 92 58.7
BraA10t44668Z Brassica rapa HOM05D000030 ORTHO05D009563 2.9e-18 95.1 75 64.0
Psat5g107360 Pisum sativum HOM05D000030 ORTHO05D000031 3.8e-18 94.7 71 64.8
Ca_02531_v3 Cicer arietinum L. HOM05D000030 ORTHO05D009563 8.5e-18 93.6 69 68.1
Sopen03g038690 Solanum pennellii HOM05D000030 ORTHO05D009563 4.2e-17 91.3 74 64.9
PGSC0003DMG400005619 Solanum tuberosum HOM05D000030 ORTHO05D009563 2.1e-16 89.0 74 62.2
Aqoxy3G03880 Aquilegia oxysepala HOM05D000030 ORTHO05D009563 2.7e-16 88.6 78 62.8
Solyc03g119830.4 Solanum lycopersicum HOM05D000030 ORTHO05D009563 3.6e-16 88.2 74 63.5
TPR.G26769 Trifolium pratense HOM05D000030 ORTHO05D009563 1.4e-15 86.3 66 66.7
Lj9C216T3 Lonicera japonica HOM05D000030 ORTHO05D000031 1.1e-14 83.2 74 62.2
Os01g0111400 Oryza sativa ssp. japonica HOM05D000030 ORTHO05D009563 2.6e-11 72.0 85 42.4
BolC5t32459H Brassica oleracea HOM05D003212 ORTHO05D017537 1.1e-09 66.6 35 82.9
PSO421G0305 Papaver somniferum HOM05D000030 ORTHO05D009563 6.7e-07 57.4 34 70.6
PSO063G2153 Papaver somniferum HOM05D000030 ORTHO05D009563 4.4e-06 54.7 36 63.9
ATR0564G191 Amborella trichopoda HOM05D000030 ORTHO05D009563 5.7e-06 54.3 61 52.5
PSO063G2643 Papaver somniferum HOM05D000030 ORTHO05D009563 9.7e-06 53.5 31 74.2


User provided reference genes

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