Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 1.4e-57 226.1 119 100.0
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 4.6e-32 141.4 106 73.6
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 1.0e-31 140.2 106 71.7
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 2.3e-31 139.0 106 70.8
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 1.1e-30 136.7 108 69.4
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.5e-30 136.3 106 72.6
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 1.9e-30 136.0 110 63.6
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 4.3e-30 134.8 106 66.0
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 4.3e-30 134.8 106 71.7
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 5.7e-30 134.4 106 65.1
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.3e-29 133.3 106 70.8
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 3.7e-29 131.7 106 67.0
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 6.2e-29 131.0 106 66.0
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 1.8e-28 129.4 108 64.8
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 3.1e-28 128.6 116 62.9
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 3.1e-28 128.6 106 66.0
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 4.1e-28 128.3 106 63.2
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 5.3e-28 127.9 106 67.0
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 5.3e-28 127.9 108 65.7
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 5.8e-27 124.4 110 61.8
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 3.8e-26 121.7 106 61.3
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 8.4e-26 120.6 106 64.2
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 1.4e-25 119.8 101 63.4
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.5e-25 119.0 110 58.2
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.2e-25 118.6 110 58.2
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 4.2e-25 118.2 110 57.3
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 4.2e-25 118.2 106 62.3
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 5.5e-25 117.9 106 60.4
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 9.3e-25 117.1 106 56.6
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 1.2e-24 116.7 110 57.3
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 1.2e-24 116.7 110 58.2
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 2.1e-24 115.9 110 55.5
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 3.5e-24 115.2 106 59.4
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 4.6e-24 114.8 110 56.4
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 4.6e-24 114.8 106 58.5
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 7.9e-24 114.0 110 58.2
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 1.0e-23 113.6 106 56.6
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 1.0e-23 113.6 106 58.5
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 1.0e-23 113.6 106 57.5
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 1.3e-23 113.2 106 57.5
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 1.8e-23 112.8 110 54.5
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.3e-23 112.5 74 74.3
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.3e-23 112.5 74 74.3
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 1.5e-22 109.8 110 53.6
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 1.5e-22 109.8 106 54.7
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 1.9e-22 109.4 110 52.7
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 2.5e-22 109.0 106 57.5
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 2.5e-22 109.0 106 56.6
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 1.1e-20 103.6 101 57.4
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 1.8e-20 102.8 106 53.8
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 2.4e-20 102.4 106 55.7
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.4e-20 102.4 123 49.6
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 2.4e-20 102.4 73 72.6
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 3.1e-20 102.1 110 52.7
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 3.1e-20 102.1 123 48.8
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 6.9e-20 100.9 110 50.0
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 1.5e-19 99.8 105 55.2
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 1.7e-18 96.3 106 50.9
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 1.7e-18 96.3 106 50.9
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 1.7e-18 96.3 106 50.9
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 1.7e-18 96.3 74 66.2
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 2.2e-18 95.9 106 50.9
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 2.2e-18 95.9 106 50.9
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 6.5e-18 94.4 110 50.0
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 8.5e-18 94.0 106 52.8
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 1.1e-17 93.6 108 49.1
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 2.7e-16 89.0 110 50.0
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 1.8e-15 86.3 74 60.8
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 2.3e-15 85.9 105 47.6
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 5.1e-15 84.7 110 48.2
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 6.7e-15 84.3 106 48.1
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 9.7e-14 80.5 58 69.0
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 1.8e-12 76.3 106 45.3
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 1.8e-12 76.3 92 47.8
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 4.5e-11 71.6 106 42.5
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 5.9e-11 71.2 108 43.5
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 2.2e-10 69.3 108 43.5
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 5.0e-10 68.2 136 36.8
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 1.1e-09 67.0 78 47.4
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 1.4e-09 66.6 106 39.6
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 9.4e-09 63.9 106 41.5
AL2G14840 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 1.2e-08 63.5 61 49.2
VMungo0251G1113 Vigna mungo HOM05D007696 ORTHO05D009719 7.9e-08 60.8 91 38.5


User provided reference genes

Program Settings