Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 3.5e-101 371.7 199 100.0
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 2.2e-66 256.1 201 67.7
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 5.3e-65 251.5 201 66.7
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 1.3e-63 246.9 199 67.3
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 2.1e-61 239.6 196 66.3
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 7.9e-61 237.7 213 64.8
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 2.3e-60 236.1 210 61.9
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 5.1e-60 235.0 214 62.1
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.5e-59 233.4 210 61.0
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 9.7e-59 230.7 210 61.0
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 3.7e-58 228.8 205 62.0
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 1.5e-56 223.4 219 60.3
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 1.5e-56 223.4 206 61.2
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 3.4e-56 222.2 214 65.4
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 1.3e-55 220.3 206 58.3
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 5.0e-55 218.4 214 65.0
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 1.1e-54 217.2 214 63.6
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 1.4e-54 216.9 198 61.1
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 3.2e-54 215.7 211 60.2
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 9.4e-54 214.2 211 59.7
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 3.6e-53 212.2 192 60.9
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 6.1e-53 211.5 207 59.9
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 1.8e-52 209.9 215 58.6
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 5.2e-52 208.4 202 56.4
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 9.7e-51 204.1 210 60.0
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 2.2e-50 203.0 205 59.0
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 3.7e-50 202.2 207 63.8
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 3.7e-50 202.2 205 57.1
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 6.3e-50 201.4 205 57.6
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 6.3e-50 201.4 204 58.3
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 1.4e-49 200.3 212 63.7
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 1.4e-49 200.3 191 58.1
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 2.4e-49 199.5 209 62.7
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.4e-49 199.5 205 58.0
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 2.4e-49 199.5 186 59.7
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.1e-49 199.1 205 57.6
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 5.3e-49 198.4 200 56.0
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 7.0e-49 198.0 160 69.4
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 7.0e-49 198.0 203 56.2
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 9.1e-49 197.6 205 57.1
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 1.6e-48 196.8 203 60.6
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 7.7e-48 194.5 209 55.0
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 7.7e-48 194.5 205 58.5
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 7.7e-48 194.5 205 58.5
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 2.2e-47 193.0 216 55.6
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 3.8e-47 192.2 207 56.0
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 5.0e-47 191.8 212 54.2
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 6.5e-47 191.4 212 54.2
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.5e-46 190.3 207 59.9
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 4.2e-46 188.7 212 55.7
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 4.2e-46 188.7 197 54.3
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 5.5e-46 188.3 195 56.9
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 1.2e-45 187.2 213 54.9
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 3.6e-45 185.7 214 55.6
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 4.7e-45 185.3 225 52.4
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 4.7e-45 185.3 217 54.8
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 1.0e-44 184.1 218 53.2
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 4.0e-44 182.2 202 55.9
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 5.2e-44 181.8 201 52.2
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 1.2e-43 180.6 206 51.5
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 2.6e-43 179.5 185 54.1
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 3.3e-43 179.1 164 65.9
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 3.3e-43 179.1 204 51.5
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 4.4e-43 178.7 211 53.1
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 5.7e-43 178.3 200 56.0
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 5.7e-43 178.3 206 51.0
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 1.3e-42 177.2 203 51.2
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 2.2e-42 176.4 208 51.9
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 2.8e-42 176.0 200 53.0
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 6.3e-42 174.9 214 50.5
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 1.8e-41 173.3 161 60.2
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 2.4e-41 172.9 258 49.2
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 4.1e-41 172.2 175 57.1
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 5.3e-41 171.8 202 52.0
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 1.2e-40 170.6 242 48.3
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 1.2e-40 170.6 211 48.8
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 1.2e-40 170.6 211 48.8
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 1.2e-40 170.6 211 48.8
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 1.6e-40 170.2 215 52.6
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 1.6e-40 170.2 215 52.6
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 1.6e-40 170.2 211 53.6
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 4.5e-40 168.7 213 52.1
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 7.7e-40 167.9 211 53.1
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 1.0e-39 167.5 166 57.8
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 1.7e-39 166.8 215 53.5
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 2.2e-39 166.4 193 55.4
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 2.9e-39 166.0 211 47.9
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 5.0e-39 165.2 211 53.6
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 8.5e-39 164.5 189 51.9
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 3.2e-38 162.5 212 46.7
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 9.4e-38 161.0 238 51.3
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 9.4e-38 161.0 174 52.3
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.2e-37 160.6 175 53.1
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 2.1e-37 159.8 118 68.6
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 4.7e-37 158.7 152 63.8
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 1.4e-36 157.1 200 48.5
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 8.8e-36 154.5 165 52.7
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.5e-35 153.7 165 50.3
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 9.8e-35 151.0 198 48.0
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 3.7e-34 149.1 200 46.5
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 6.3e-34 148.3 248 42.3
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 3.1e-33 146.0 185 53.0
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 7.0e-33 144.8 182 51.6
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 5.0e-31 138.7 212 45.8
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 1.1e-30 137.5 94 73.4
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 1.1e-30 137.5 94 73.4
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 1.1e-30 137.5 94 73.4
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 3.2e-30 136.0 90 67.8
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 2.8e-29 132.9 153 56.2
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.0e-28 131.0 204 43.1
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 2.6e-27 126.3 204 41.2
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 1.8e-25 120.2 87 63.2
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.4e-25 119.8 197 41.1
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 1.3e-23 114.0 92 57.6
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 3.8e-23 112.5 122 47.5
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.8e-21 106.3 93 58.1
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.5e-19 100.5 183 42.1
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 3.4e-19 99.4 84 52.4
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 4.4e-19 99.0 206 41.3
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 3.7e-18 95.9 123 46.3
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 4.9e-18 95.5 208 40.9
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 5.4e-17 92.0 87 51.7
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 5.4e-17 92.0 87 51.7
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 1.7e-10 70.5 173 32.9
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 4.9e-10 68.9 93 40.9
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 1.2e-08 64.3 36 72.2
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 3.5e-08 62.8 107 35.5
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 4.6e-08 62.4 40 62.5
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 1.3e-07 60.8 65 53.8
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 1.7e-07 60.5 107 32.7
BolC2t09172H Brassica oleracea HOM05D000194 ORTHO05D007246 3.9e-07 59.3 72 54.2
Glyma.09G185300 Glycine max HOM05D005829 ORTHO05D007246 5.0e-07 58.9 230 28.3
BcaC03g15457 Brassica carinata HOM05D000194 ORTHO05D000069 1.5e-06 57.4 59 62.7
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 3.3e-06 56.2 212 29.7


User provided reference genes

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