Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 1.2e-183 646.4 336 100.0
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 5.1e-145 518.1 371 74.1
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 9.7e-144 513.8 386 70.5
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 2.8e-143 512.3 387 70.8
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 2.8e-143 512.3 394 70.6
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 3.7e-143 511.9 383 72.3
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 1.8e-142 509.6 391 71.9
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.8e-142 509.6 378 71.4
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 1.8e-142 509.6 378 71.4
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 6.9e-142 507.7 394 72.3
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.0e-141 506.1 389 72.2
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 3.4e-141 505.4 379 70.4
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 5.9e-141 504.6 375 72.8
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 7.7e-141 504.2 394 71.3
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 6.5e-140 501.1 378 70.6
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 7.2e-139 497.7 392 67.9
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 1.2e-138 496.9 396 69.2
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.2e-138 496.9 363 73.3
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.0e-137 493.8 401 67.8
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 1.4e-137 493.4 380 71.1
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.8e-137 493.0 391 67.8
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 1.8e-137 493.0 400 68.2
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 5.1e-137 491.5 369 71.5
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 6.7e-137 491.1 393 68.7
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 1.1e-136 490.3 397 67.8
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.1e-136 490.3 398 64.8
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 1.1e-136 490.3 396 66.4
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.5e-136 490.0 407 68.6
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 1.5e-136 490.0 401 68.8
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 2.0e-136 489.6 397 66.5
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 7.4e-136 487.6 371 70.6
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.7e-135 486.5 413 64.6
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 1.1e-134 483.8 402 68.2
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.2e-133 480.3 382 67.5
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 2.6e-133 479.2 391 68.3
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 1.3e-132 476.9 412 66.0
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.9e-132 475.7 420 61.7
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 2.9e-132 475.7 405 68.4
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 2.9e-132 475.7 400 66.5
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.8e-132 475.3 394 64.0
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.1e-131 473.8 401 65.8
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 1.1e-131 473.8 418 64.1
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 5.5e-131 471.5 410 64.9
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 7.2e-131 471.1 393 65.4
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.1e-130 469.5 407 66.8
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 2.7e-130 469.2 407 66.8
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 1.4e-129 466.8 413 64.2
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 3.0e-129 465.7 420 62.4
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 6.7e-129 464.5 377 66.6
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 8.8e-129 464.2 395 64.8
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 8.8e-129 464.2 396 64.9
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 9.7e-128 460.7 425 58.8
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 2.8e-127 459.1 413 62.0
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 3.1e-126 455.7 427 61.4
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 5.3e-126 454.9 402 63.7
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 5.3e-126 454.9 392 66.1
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 7.0e-126 454.5 354 70.3
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.2e-125 453.8 403 62.3
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 2.6e-125 452.6 356 70.2
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 5.9e-125 451.4 396 62.9
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 5.9e-125 451.4 412 58.5
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.0e-124 450.7 392 63.0
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 1.7e-124 449.9 426 60.6
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.7e-124 449.9 399 63.4
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 6.5e-124 448.0 399 63.7
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 8.5e-124 447.6 403 61.5
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 1.5e-123 446.8 425 60.2
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.9e-123 446.4 395 61.5
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 3.2e-123 445.7 400 62.2
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 3.2e-123 445.7 400 62.2
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 3.2e-123 445.7 412 62.9
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 5.5e-123 444.9 399 63.4
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 7.2e-123 444.5 364 66.8
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 7.2e-123 444.5 394 60.7
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 7.2e-123 444.5 404 63.6
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 9.4e-123 444.1 402 61.7
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 9.4e-123 444.1 402 61.7
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.6e-122 443.4 404 63.1
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.6e-122 443.4 416 57.9
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 2.1e-122 443.0 399 63.2
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 2.1e-122 443.0 365 64.4
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 3.6e-122 442.2 403 63.0
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 6.1e-122 441.4 386 63.7
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 2.3e-121 439.5 342 69.0
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 5.2e-121 438.3 327 69.4
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.7e-121 438.0 412 58.5
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 1.2e-120 437.2 403 62.5
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-119 433.7 407 58.0
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.7e-119 433.3 353 62.6
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.7e-119 433.3 417 56.8
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.7e-119 432.2 415 57.3
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.8e-118 429.9 368 63.3
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 3.1e-118 429.1 354 61.9
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 2.0e-117 426.4 340 68.8
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 9.4e-115 417.5 344 65.4
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 6.1e-114 414.8 479 52.4
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.4e-113 413.7 342 64.0
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 3.0e-113 412.5 351 60.7
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 6.8e-113 411.4 324 68.5
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 4.8e-111 405.2 413 58.6
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 2.4e-110 402.9 388 57.0
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 2.9e-108 396.0 340 64.1
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 1.2e-106 390.6 313 63.6
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 2.1e-106 389.8 367 57.8
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 7.5e-104 381.3 392 55.4
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 4.9e-103 378.6 407 52.6
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 4.9e-103 378.6 310 64.5
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 1.4e-102 377.1 330 64.8
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 1.4e-102 377.1 312 64.4
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.1e-102 375.9 405 52.3
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 5.0e-100 368.6 393 51.7
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.0e-100 368.6 393 51.7
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.0e-98 361.3 423 50.6
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.1e-97 359.4 393 50.6
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 7.0e-94 348.2 386 50.8
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.5e-91 339.7 387 53.2
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 9.5e-91 337.8 346 56.1
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 3.1e-89 332.8 306 59.5
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 5.8e-88 328.6 382 46.3
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 1.2e-85 320.9 166 89.2
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 3.9e-84 315.8 324 53.4
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 5.1e-84 315.5 343 49.0
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 6.2e-82 308.5 328 50.9
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 6.8e-81 305.1 329 49.2
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 5.8e-80 302.0 180 78.3
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 6.0e-77 292.0 286 52.8
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 1.4e-73 280.8 350 46.9
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 2.2e-71 273.5 275 61.1
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.4e-65 254.2 273 58.2
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 5.3e-65 252.3 138 86.2
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.3e-60 237.7 291 49.8
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 7.6e-56 221.9 123 84.6
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 1.2e-53 214.5 252 53.2
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 6.0e-53 212.2 120 82.5
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 3.7e-50 203.0 273 44.0
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 5.5e-46 189.1 146 67.8
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 2.7e-45 186.8 113 71.7
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.9e-43 180.6 168 54.8
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 3.4e-40 169.9 97 80.4
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 4.3e-35 152.9 146 58.2
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 1.9e-30 137.5 260 34.2
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 3.7e-26 123.2 101 67.3
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.3e-15 88.2 76 52.6
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 1.0e-12 78.6 37 91.9
unitig_61.g26223 Utricularia gibba HOM05D005199 ORTHO05D006277 1.0e-07 62.0 59 55.9
unitig_0.g1098 Utricularia gibba HOM05D005199 ORTHO05D006277 8.5e-07 58.9 72 45.8


User provided reference genes

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