Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 2.4e-145 518.8 265 100.0
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 1.5e-62 243.8 248 53.2
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 1.2e-61 240.7 246 57.3
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 5.2e-60 235.3 252 54.0
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 1.2e-59 234.2 252 54.0
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 1.2e-59 234.2 252 54.0
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 1.2e-59 234.2 248 55.2
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 5.8e-59 231.9 251 50.2
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 7.6e-59 231.5 250 52.8
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 1.6e-56 223.8 264 49.6
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 1.6e-56 223.8 264 49.6
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 3.0e-55 219.5 269 46.5
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 5.1e-55 218.8 269 46.1
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 1.1e-54 217.6 250 50.4
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 1.9e-54 216.9 268 46.3
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 7.3e-54 214.9 267 45.3
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 1.3e-53 214.2 244 49.2
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 6.2e-53 211.8 271 43.9
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 1.1e-52 211.1 263 46.0
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 1.4e-52 210.7 249 48.6
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 1.8e-52 210.3 267 46.4
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 3.1e-52 209.5 260 46.2
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 3.1e-52 209.5 260 46.2
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 3.1e-52 209.5 260 46.2
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 3.1e-52 209.5 261 46.0
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 5.3e-52 208.8 252 50.8
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 9.0e-52 208.0 261 45.6
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 9.0e-52 208.0 267 44.2
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 1.2e-51 207.6 267 44.2
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 2.0e-51 206.8 251 46.2
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 7.6e-51 204.9 240 48.8
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 1.9e-46 190.3 251 43.8
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 3.3e-46 189.5 245 42.9
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 2.8e-45 186.4 265 40.4
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 1.1e-44 184.5 253 43.1
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 1.4e-44 184.1 253 43.5
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 2.4e-44 183.3 253 42.7
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 3.1e-44 183.0 259 39.8
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 5.3e-44 182.2 241 42.3
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 5.3e-44 182.2 256 39.1
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 9.0e-44 181.4 256 38.7
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 2.9e-42 176.4 241 39.0
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 4.2e-41 172.6 237 43.5
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 9.3e-41 171.4 236 46.2
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 1.2e-40 171.0 252 40.5
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 6.0e-40 168.7 241 46.5
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 7.9e-40 168.3 258 39.1
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 3.0e-39 166.4 207 48.3
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.9e-39 166.0 236 44.1
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 6.7e-39 165.2 238 40.3
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 2.5e-38 163.3 253 40.7
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 2.5e-38 163.3 238 38.7
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 4.8e-37 159.1 257 37.7
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 3.8e-34 149.4 235 38.3
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 2.1e-32 143.7 138 55.1
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.9e-31 139.4 206 44.7
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 5.7e-30 135.6 190 41.1
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.6e-27 126.7 205 39.5
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 1.8e-20 104.0 124 40.3
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 3.8e-18 96.3 268 28.7
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.5e-14 83.6 215 33.5
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 4.1e-12 76.3 77 55.8
AagrBONN_evm.TU.Sc2ySwM_228.1887 Anthoceros agrestis HOM05D002266 ORTHO05D010337 3.3e-06 56.6 141 31.2


User provided reference genes

Program Settings