Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc13.12 Carica papaya HOM05D000261 ORTHO05D001168 4.0e-90 334.7 165 100.0
Cpa.g.sc13.8 Carica papaya HOM05D000261 ORTHO05D001168 5.4e-47 191.4 170 63.5
Ciclev10019473m.g Citrus clementina HOM05D000261 ORTHO05D001168 1.6e-19 100.1 172 40.1
Duzib205G0941 Durio zibethinus HOM05D000261 ORTHO05D001168 2.8e-19 99.4 165 41.2
Haze_18655 Corylus avellana HOM05D000261 ORTHO05D001168 3.6e-19 99.0 158 40.5
Thecc.03G033100 Theobroma cacao HOM05D000261 ORTHO05D001168 3.1e-18 95.9 170 40.0
Cfa019794 Carpinus fangiana HOM05D000261 ORTHO05D001168 4.0e-18 95.5 158 39.2
Potri.015G053300 Populus trichocarpa HOM05D000261 ORTHO05D001168 6.9e-18 94.7 152 40.1
Dinv09812 Davidia involucrata HOM05D000261 ORTHO05D001168 1.5e-17 93.6 167 38.9
Lj5A147T40 Lonicera japonica HOM05D000261 ORTHO05D001168 2.0e-17 93.2 164 40.9
Manes.05G138500 Manihot esculenta HOM05D000261 ORTHO05D001168 2.0e-17 93.2 139 43.2
Duzib068G0905 Durio zibethinus HOM05D000261 ORTHO05D001168 7.6e-17 91.3 168 41.1
vmacro17666 Vaccinium macrocarpon HOM05D000261 ORTHO05D001168 1.3e-16 90.5 167 37.7
Atru.chr9.807 Acer truncatum HOM05D000261 ORTHO05D001168 1.7e-16 90.1 168 38.1
TWI15G0250 Tripterygium wilfordii HOM05D000261 ORTHO05D001168 1.7e-16 90.1 155 39.4
PGR044G0408 Punica granatum HOM05D000261 ORTHO05D001168 3.8e-16 89.0 149 40.3
CANSAT80G1989 Cannabis sativa HOM05D000261 ORTHO05D001168 1.9e-15 86.7 165 37.0
Actinidia39821 Actinidia chinensis HOM05D000261 ORTHO05D001168 5.5e-15 85.1 158 41.1
CSS0028962 Camellia sinensis var. sinensis HOM05D000261 ORTHO05D001168 5.5e-15 85.1 169 37.9
CiPaw.16G085400 Carya illinoinensis HOM05D000261 ORTHO05D001168 5.5e-15 85.1 186 36.6
Gohir.A11G005900 Gossypium hirsutum HOM05D000261 ORTHO05D001168 5.5e-15 85.1 163 42.3
Gohir.D11G005000 Gossypium hirsutum HOM05D000261 ORTHO05D001168 7.1e-15 84.7 163 41.7
Gorai.007G006200 Gossypium raimondii HOM05D000261 ORTHO05D001168 7.1e-15 84.7 163 41.7
Hma1.2p1_1001F.1_g246540 Hydrangea macrophylla HOM05D000261 ORTHO05D001168 9.3e-15 84.3 164 40.2
Peaxi162Scf00013g00933 Petunia axillaris HOM05D000261 ORTHO05D001168 1.1e-12 77.4 153 35.9
TAR629G2210 Trochodendron aralioides HOM05D000261 ORTHO05D001168 1.5e-12 77.0 137 38.7
Eucgr.K02213 Eucalyptus grandis HOM05D000261 ORTHO05D001168 1.9e-12 76.6 152 37.5
THA.LOC104820399 Tarenaya hassleriana HOM05D000261 ORTHO05D001168 3.3e-12 75.9 162 33.3
QL10p025000 Quercus lobata HOM05D000261 ORTHO05D001168 2.8e-11 72.8 180 33.3
Cc04_g07260 Coffea canephora HOM05D000261 ORTHO05D001168 8.1e-11 71.2 147 34.7
Thhalv10011346m.g Eutrema salsugineum HOM05D000261 ORTHO05D001168 8.1e-11 71.2 159 31.4
Glyma.07G090000 Glycine max HOM05D000261 ORTHO05D001168 1.1e-10 70.9 183 35.5
Aa31LG10G4890 Aethionema arabicum HOM05D000261 ORTHO05D001168 2.4e-10 69.7 159 30.2
Glyma.09G185900 Glycine max HOM05D000261 ORTHO05D001168 3.1e-10 69.3 151 36.4
Nn4g23794 Nelumbo nucifera HOM05D000261 ORTHO05D001168 3.1e-10 69.3 150 35.3
CsaV3_1G006550 Cucumis sativus L. HOM05D000261 ORTHO05D001168 6.9e-10 68.2 156 35.9
TAR371G1242 Trochodendron aralioides HOM05D000261 ORTHO05D001168 6.9e-10 68.2 145 36.6
Carub.0001s3823 Capsella rubella HOM05D000261 ORTHO05D001168 9.0e-10 67.8 166 32.5
Lj2g0020668 Lotus japonicus HOM05D000261 ORTHO05D001168 9.0e-10 67.8 143 36.4
Lsat_1_v5_gn_2_12101 Lactuca sativa HOM05D000261 ORTHO05D001168 1.2e-09 67.4 167 34.1
CAN.G423.2 Capsicum annuum HOM05D000261 ORTHO05D001168 1.5e-09 67.0 150 36.7
AL1G55930 Arabidopsis lyrata HOM05D000261 ORTHO05D001168 2.0e-09 66.6 148 33.1
AT1G49050 Arabidopsis thaliana HOM05D000261 ORTHO05D001168 2.0e-09 66.6 150 32.7
CARHR039090 Cardamine hirsuta HOM05D000261 ORTHO05D001168 2.6e-09 66.2 141 36.9
DCAR_023197 Daucus carota HOM05D000261 ORTHO05D001168 2.6e-09 66.2 170 35.3
Sp1g35960 Schrenkiella parvula HOM05D000261 ORTHO05D001168 3.4e-09 65.9 143 34.3
Solyc06g069190.4 Solanum lycopersicum HOM05D000261 ORTHO05D001168 4.5e-09 65.5 141 34.8
PGSC0003DMG400004069 Solanum tuberosum HOM05D000261 ORTHO05D001168 4.5e-09 65.5 139 36.7
MELO3C002082.2 Cucumis melo HOM05D000261 ORTHO05D001168 5.8e-09 65.1 152 34.2
Nitab4.5_0010801g0010 Nicotiana tabacum HOM05D000261 ORTHO05D001168 5.8e-09 65.1 171 32.7
Nitab4.5_0011561g0010 Nicotiana tabacum HOM05D000261 ORTHO05D001168 5.8e-09 65.1 141 36.2
Sopen06g026460 Solanum pennellii HOM05D000261 ORTHO05D001168 5.8e-09 65.1 141 35.5
BcaB02g11295 Brassica carinata HOM05D000261 ORTHO05D001168 1.3e-08 63.9 165 31.5
arahy.Tifrunner.gnm1.ann1.6Q3FKA Arachis hypogaea HOM05D000261 ORTHO05D001168 2.9e-08 62.8 180 28.9
arahy.Tifrunner.gnm1.ann1.TGXT8E Arachis hypogaea HOM05D000261 ORTHO05D001168 2.9e-08 62.8 180 28.9
VMungo0464G0021 Vigna mungo HOM05D000261 ORTHO05D001168 6.5e-08 61.6 155 32.3
BcaC05g27542 Brassica carinata HOM05D000261 ORTHO05D001168 8.4e-08 61.2 168 32.1
C05p35270 Brassica napus HOM05D000261 ORTHO05D001168 8.4e-08 61.2 168 32.1
BolC5t32241H Brassica oleracea HOM05D000261 ORTHO05D001168 8.4e-08 61.2 168 32.1
SalBow1G2881 Salvia bowleyana HOM05D000261 ORTHO05D001168 8.4e-08 61.2 145 34.5
Lalb_Chr14g0371271 Lupinus albus HOM05D000261 ORTHO05D001168 1.1e-07 60.8 144 33.3
Ca_25507_v3 Cicer arietinum L. HOM05D000261 ORTHO05D001168 1.4e-07 60.5 167 33.5
Phvul.004G159200 Phaseolus vulgaris HOM05D000261 ORTHO05D001168 1.4e-07 60.5 157 31.8
Psat1g038960 Pisum sativum HOM05D000261 ORTHO05D001168 1.9e-07 60.1 157 32.5
Sed0007266 Sechium edule HOM05D000261 ORTHO05D001168 2.5e-07 59.7 149 32.2
HanXRQChr10g0291991 Helianthus annuus HOM05D000261 ORTHO05D001168 7.1e-07 58.2 155 33.5
MSTRG.4554 Avicennia marina HOM05D000261 ORTHO05D001168 9.3e-07 57.8 161 33.5
Medtr6g084710 Medicago truncatula HOM05D000261 ORTHO05D001168 1.2e-06 57.4 161 32.9
MBI19_g21651_MAGBIO Magnolia biondii HOM05D000261 ORTHO05D001168 1.6e-06 57.0 143 33.6
ATR0564G218 Amborella trichopoda HOM05D000261 ORTHO05D001168 2.1e-06 56.6 140 30.0
COL.COLO4_04352 Corchorus olitorius HOM05D000261 ORTHO05D001168 2.1e-06 56.6 71 46.5
TPR.G35234 Trifolium pratense HOM05D000261 ORTHO05D001168 3.5e-06 55.8 154 31.8
ClCG04G011200 Citrullus lanatus HOM05D000261 ORTHO05D001168 4.6e-06 55.5 155 32.3


User provided reference genes

Program Settings