Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 2.3e-72 275.8 175 100.0
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 2.9e-38 162.5 179 56.4
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 4.1e-37 158.7 185 70.3
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 5.4e-37 158.3 179 67.0
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 2.0e-36 156.4 179 71.5
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 9.5e-34 147.5 184 67.4
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 3.6e-33 145.6 188 60.6
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.8e-32 143.3 174 69.0
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.8e-32 143.3 174 69.0
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.8e-32 141.4 174 68.4
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 8.9e-32 141.0 177 59.9
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.5e-31 140.2 182 65.4
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.4e-31 139.0 180 67.2
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 4.4e-31 138.7 181 64.1
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 5.8e-31 138.3 178 69.7
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 5.8e-31 138.3 178 69.7
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 1.3e-30 137.1 175 58.9
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 8.3e-30 134.4 175 64.6
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.4e-29 133.7 181 67.4
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 3.2e-29 132.5 184 47.3
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 1.2e-28 130.6 178 66.3
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 1.6e-28 130.2 179 63.7
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 2.7e-28 129.4 178 66.9
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 6.0e-28 128.3 178 64.0
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 7.8e-28 127.9 181 62.4
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.0e-27 127.5 183 62.3
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.0e-27 127.5 175 54.3
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 3.0e-27 125.9 178 63.5
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 1.5e-26 123.6 178 56.7
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.5e-26 123.6 195 60.5
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 1.9e-26 123.2 179 58.1
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 1.9e-26 123.2 183 59.6
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.5e-26 122.9 180 46.7
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 4.3e-26 122.1 174 46.0
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 4.3e-26 122.1 190 48.9
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 4.3e-26 122.1 175 65.7
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.3e-26 122.1 180 46.7
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 5.6e-26 121.7 174 58.6
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 5.6e-26 121.7 119 63.0
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.6e-25 120.2 186 56.5
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.1e-25 119.8 178 47.8
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 2.1e-25 119.8 166 69.9
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 2.1e-25 119.8 174 58.0
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 2.8e-25 119.4 173 61.3
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 3.6e-25 119.0 131 51.9
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.6e-25 119.0 156 64.1
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 4.7e-25 118.6 178 63.5
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 4.7e-25 118.6 182 62.6
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 4.7e-25 118.6 195 59.0
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 4.7e-25 118.6 178 47.2
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 8.1e-25 117.9 174 45.4
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 8.1e-25 117.9 174 45.4
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 8.1e-25 117.9 182 62.6
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 8.1e-25 117.9 176 51.1
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-24 117.5 178 52.2
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 1.1e-24 117.5 191 61.3
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 1.8e-24 116.7 174 44.3
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.8e-24 116.7 139 54.0
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 2.3e-24 116.3 178 63.5
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 2.3e-24 116.3 178 61.2
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.8e-24 114.8 178 45.5
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 6.8e-24 114.8 174 63.2
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 8.9e-24 114.4 129 69.0
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.2e-23 114.0 174 44.3
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 4.4e-23 112.1 187 61.0
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 5.8e-23 111.7 178 52.8
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 7.5e-23 111.3 174 60.3
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 7.5e-23 111.3 174 60.3
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 1.3e-22 110.5 174 44.3
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 1.3e-22 110.5 170 45.9
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 1.3e-22 110.5 174 61.5
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 2.2e-22 109.8 181 55.2
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 2.2e-22 109.8 180 61.7
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 2.9e-22 109.4 178 59.6
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 2.9e-22 109.4 178 59.6
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 3.7e-22 109.0 174 51.7
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 3.7e-22 109.0 187 60.4
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 4.9e-22 108.6 177 55.4
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 4.9e-22 108.6 191 59.2
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 6.4e-22 108.2 184 60.3
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 8.3e-22 107.8 174 46.0
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 8.3e-22 107.8 174 46.0
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 8.3e-22 107.8 195 50.8
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 8.3e-22 107.8 175 61.1
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 1.1e-21 107.5 174 61.5
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 1.1e-21 107.5 175 62.3
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 1.1e-21 107.5 174 61.5
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.1e-21 107.5 179 60.9
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 1.1e-21 107.5 174 59.2
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 1.9e-21 106.7 144 68.8
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 2.4e-21 106.3 184 59.8
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.4e-21 106.3 175 43.4
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 3.2e-21 105.9 195 54.9
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 4.1e-21 105.5 119 53.8
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 5.4e-21 105.1 174 48.3
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 7.1e-21 104.8 178 57.3
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 7.1e-21 104.8 174 58.6
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 2.1e-20 103.2 174 41.4
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 2.1e-20 103.2 178 60.7
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 3.5e-20 102.4 174 44.3
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 3.5e-20 102.4 174 44.3
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 3.5e-20 102.4 174 44.3
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 3.5e-20 102.4 166 62.7
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 4.6e-20 102.1 174 45.4
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 4.6e-20 102.1 174 55.2
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 6.0e-20 101.7 116 76.7
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.3e-19 100.5 165 59.4
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 3.9e-19 99.0 119 54.6
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 5.1e-19 98.6 175 42.3
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 5.1e-19 98.6 126 48.4
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 1.5e-18 97.1 169 42.6
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 2.5e-18 96.3 90 91.1
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 4.3e-18 95.5 188 41.0
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 5.6e-18 95.1 200 54.5
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.2e-17 94.0 181 40.3
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.6e-17 93.6 122 47.5
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 2.1e-17 93.2 114 50.9
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.1e-17 93.2 172 57.6
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 3.6e-17 92.4 171 43.9
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 4.7e-17 92.0 183 50.8
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 6.2e-17 91.7 174 56.3
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 8.1e-17 91.3 176 54.0
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.1e-16 90.9 120 47.5
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 2.6e-15 86.3 171 38.6
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 4.4e-15 85.5 202 47.5
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 5.8e-15 85.1 120 53.3
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 1.1e-13 80.9 202 47.5
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 1.9e-13 80.1 172 52.3
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 4.1e-13 79.0 247 39.7
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 4.1e-13 79.0 176 36.9
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 5.4e-13 78.6 125 43.2
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 3.5e-12 75.9 144 53.5
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 1.3e-11 73.9 174 51.7
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.3e-11 73.2 176 48.3
SEGI_18714 Sequoiadendron giganteum HOM05D005335 ORTHO05D006472 8.9e-08 61.2 89 69.7
ECA246G0037 Erigeron canadensis HOM05D005335 ORTHO05D006472 5.8e-07 58.5 173 43.9
AUR62042463 Chenopodium quinoa HOM05D000179 ORTHO05D000107 9.9e-07 57.8 128 46.1
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 3.8e-06 55.8 69 85.5
unitig_8.g4035 Utricularia gibba HOM05D005335 ORTHO05D006472 6.4e-06 55.1 122 53.3
CsaV3_1G004880 Cucumis sativus L. HOM05D000179 ORTHO05D000107 8.4e-06 54.7 132 42.4


User provided reference genes

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