Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc129.12 Carica papaya HOM05D015120 ORTHO05D010666 2.7e-132 475.3 236 100.0
Thecc.01G085100 Theobroma cacao HOM05D015120 ORTHO05D010666 5.0e-30 135.6 221 39.8
Ciclev10013330m.g Citrus clementina HOM05D015120 ORTHO05D010666 1.5e-29 134.0 203 36.9
Cpa.g.sc104.41 Carica papaya HOM05D015120 ORTHO05D010825 8.9e-27 124.8 216 34.7
Atru.chr8.1376 Acer truncatum HOM05D015120 ORTHO05D010666 1.1e-24 117.9 235 34.5
Gorai.011G109200 Gossypium raimondii HOM05D015120 ORTHO05D010666 1.6e-23 114.0 213 35.2
Gohir.D10G099500 Gossypium hirsutum HOM05D015120 ORTHO05D010666 1.3e-22 110.9 213 34.3
Gohir.A10G088400 Gossypium hirsutum HOM05D015120 ORTHO05D010666 1.1e-21 107.8 213 34.3
MD14G1037900 Malus domestica HOM05D010052 ORTHO05D010666 4.3e-21 105.9 225 30.7
Prupe.7G096500 Prunus persica HOM05D010052 ORTHO05D010666 6.8e-19 98.6 173 32.9
MD14G1037800 Malus domestica HOM05D010052 ORTHO05D010666 1.1e-16 91.3 181 29.8
FvH4_6g24970 Fragaria vesca HOM05D010052 ORTHO05D010666 2.4e-16 90.1 175 30.9
FAN14G1910 Fragaria x ananassa HOM05D010052 ORTHO05D010666 4.1e-16 89.4 175 30.9
MD12G1087900 Malus domestica HOM05D010052 ORTHO05D010666 4.1e-16 89.4 210 31.0
Prupe.7G096700 Prunus persica HOM05D010052 ORTHO05D010666 1.6e-15 87.4 178 30.9
FAN09G4754 Fragaria x ananassa HOM05D010052 ORTHO05D010666 2.1e-15 87.0 175 30.3
MD07G1151300 Malus domestica HOM05D010052 ORTHO05D010666 2.1e-15 87.0 210 31.4
COL.COLO4_11689 Corchorus olitorius HOM05D015120 ORTHO05D010666 1.0e-14 84.7 144 34.0
TWI53G0569 Tripterygium wilfordii HOM05D008136 ORTHO05D002052 3.9e-14 82.8 195 31.3
Prupe.7G048100 Prunus persica HOM05D010052 ORTHO05D010666 5.6e-13 79.0 209 29.2
TWI74G0144 Tripterygium wilfordii HOM05D008136 ORTHO05D002052 7.3e-13 78.6 192 30.2
COL.COLO4_32398 Corchorus olitorius HOM05D010991 ORTHO05D010825 1.2e-12 77.8 197 29.4
VMungo1383G3225 Vigna mungo HOM05D013176 ORTHO05D010666 8.9e-11 71.6 173 25.4
QL12p000905 Quercus lobata HOM05D030319 ORTHO05D024879 1.2e-10 71.2 177 29.9
CiPaw.09G020400 Carya illinoinensis HOM05D008136 ORTHO05D002052 4.4e-10 69.3 175 24.6
Thecc.02G129000 Theobroma cacao HOM05D010991 ORTHO05D010825 4.4e-10 69.3 171 28.7
Eucgr.A02595 Eucalyptus grandis HOM05D008136 ORTHO05D002052 5.8e-10 68.9 202 27.7
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 9.9e-10 68.2 198 26.8
Haze_19713 Corylus avellana HOM05D008136 ORTHO05D002052 2.2e-09 67.0 206 25.7
Sed0011968 Sechium edule HOM05D008136 ORTHO05D002052 2.2e-09 67.0 189 26.5
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 2.9e-09 66.6 193 27.5
CsaV3_6G038540 Cucumis sativus L. HOM05D002687 ORTHO05D002052 3.7e-09 66.2 188 24.5
Lj1g0003825 Lotus japonicus HOM05D013176 ORTHO05D010666 3.7e-09 66.2 175 25.7
CsaV3_3G037890 Cucumis sativus L. HOM05D008136 ORTHO05D002052 4.9e-09 65.9 183 26.8
Nitab4.5_0000893g0110 Nicotiana tabacum HOM05D002687 ORTHO05D002052 4.9e-09 65.9 202 30.7
Potri.016G071100 Populus trichocarpa HOM05D009874 ORTHO05D010825 4.9e-09 65.9 172 27.9
MELO3C014517.2 Cucumis melo HOM05D002687 ORTHO05D002052 6.4e-09 65.5 188 24.5
Aqoxy1G00678 Aquilegia oxysepala HOM05D002687 ORTHO05D002052 1.1e-08 64.7 189 25.4
Nitab4.5_0000158g0010 Nicotiana tabacum HOM05D002687 ORTHO05D002052 1.1e-08 64.7 202 30.7
Thecc.05G103000 Theobroma cacao HOM05D008136 ORTHO05D002052 1.1e-08 64.7 183 25.7
Rhsim03G0065900 Rhododendron simsii HOM05D008136 ORTHO05D002052 1.9e-08 63.9 193 29.0
ClCG02G022410 Citrullus lanatus HOM05D002687 ORTHO05D002052 2.4e-08 63.5 190 23.7
Dinv31752 Davidia involucrata HOM05D002687 ORTHO05D022209 2.4e-08 63.5 167 28.7
Duzib093G0447 Durio zibethinus HOM05D008136 ORTHO05D002052 2.4e-08 63.5 172 23.3
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 2.4e-08 63.5 180 28.3
VMungo1309G2852 Vigna mungo HOM05D013176 ORTHO05D010666 2.4e-08 63.5 159 24.5
Oeu052622.2 Olea europaea HOM05D022101 ORTHO05D022209 3.2e-08 63.2 204 26.0
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 4.1e-08 62.8 154 28.6
FAN05G0496 Fragaria x ananassa HOM05D009874 ORTHO05D010825 4.1e-08 62.8 170 27.6
FvH4_6g20210 Fragaria vesca HOM05D009874 ORTHO05D010825 5.4e-08 62.4 171 26.3
QL01p011302 Quercus lobata HOM05D002687 ORTHO05D002052 5.4e-08 62.4 227 26.4
Lsat_1_v5_gn_2_38441 Lactuca sativa HOM05D002687 ORTHO05D002052 7.1e-08 62.0 202 27.7
Rhsim13G0195600 Rhododendron simsii HOM05D002687 ORTHO05D002052 7.1e-08 62.0 182 26.4
RcHm_v2.0_Chr3g0475751 Rosa chinensis HOM05D009874 ORTHO05D010825 7.1e-08 62.0 171 26.3
Prupe.7G096800 Prunus persica HOM05D009874 ORTHO05D010825 9.2e-08 61.6 168 27.4
TAR633G1301 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.6e-07 60.8 199 26.1
Actinidia07275 Actinidia chinensis HOM05D002687 ORTHO05D002052 2.1e-07 60.5 184 27.2
TAR623G1724 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.7e-07 60.1 177 28.2
TAR636G0437 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.7e-07 60.1 173 25.4
TAR636G3204 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.7e-07 60.1 173 25.4
Oeu055534.1 Olea europaea HOM05D012176 ORTHO05D014468 3.5e-07 59.7 158 26.6
CSS0036580 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 6.0e-07 58.9 193 26.9
Psat3g028960 Pisum sativum HOM05D013176 ORTHO05D010666 6.0e-07 58.9 170 25.9
Rhsim01G0201900 Rhododendron simsii HOM05D002687 ORTHO05D002052 6.0e-07 58.9 194 29.4
FAN05G5202 Fragaria x ananassa HOM05D009874 ORTHO05D010825 7.8e-07 58.5 126 29.4
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.8e-07 58.5 178 23.6
Lj1C262G4 Lonicera japonica HOM05D002687 ORTHO05D002052 1.0e-06 58.2 174 27.6
Oeu050407.1 Olea europaea HOM05D012176 ORTHO05D014468 1.3e-06 57.8 156 25.6
RcHm_v2.0_Chr2g0124701 Rosa chinensis HOM05D010052 ORTHO05D010666 1.3e-06 57.8 77 32.5
Sp5g09840 Schrenkiella parvula HOM05D008136 ORTHO05D002052 2.3e-06 57.0 197 25.4
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 3.0e-06 56.6 157 28.0
Thhalv10010982m.g Eutrema salsugineum HOM05D008136 ORTHO05D002052 5.1e-06 55.8 191 25.1
MD00G1129000 Malus domestica HOM05D002687 ORTHO05D002052 5.1e-06 55.8 171 25.7
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 6.6e-06 55.5 202 25.7
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 6.6e-06 55.5 202 25.7
AL5G33110 Arabidopsis lyrata HOM05D008136 ORTHO05D002052 8.6e-06 55.1 198 25.3


User provided reference genes

Program Settings