Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 2.8e-79 298.5 147 100.0
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 5.0e-28 128.3 134 53.7
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 5.5e-27 124.8 129 56.6
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 8.0e-26 120.9 134 49.3
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 1.4e-25 120.2 140 51.4
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 1.8e-25 119.8 155 47.7
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 5.7e-24 114.8 124 50.8
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 1.3e-23 113.6 152 42.8
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.7e-23 113.2 149 43.6
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 1.8e-22 109.8 138 44.9
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 3.1e-22 109.0 123 49.6
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 5.4e-22 108.2 150 44.7
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 7.0e-22 107.8 144 44.4
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.2e-21 107.1 149 42.3
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 1.2e-21 107.1 136 47.1
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 3.5e-21 105.5 139 47.5
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 1.0e-20 104.0 153 43.1
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 1.7e-20 103.2 135 46.7
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 2.3e-20 102.8 135 45.2
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 5.0e-20 101.7 122 47.5
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 8.6e-20 100.9 118 49.2
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 1.1e-19 100.5 95 56.8
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 1.1e-19 100.5 130 45.4
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 2.5e-19 99.4 118 48.3
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 3.3e-19 99.0 114 48.2
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 5.5e-19 98.2 142 43.0
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 1.2e-18 97.1 148 42.6
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 1.6e-18 96.7 141 41.1
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 1.6e-18 96.7 110 50.0
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 4.7e-18 95.1 143 41.3
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 8.0e-18 94.4 142 44.4
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 2.3e-17 92.8 127 48.0
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 8.9e-17 90.9 119 47.1
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 1.2e-16 90.5 126 40.5
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 2.0e-16 89.7 140 42.1
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 2.0e-16 89.7 143 44.1
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 7.5e-16 87.8 131 45.0
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 1.3e-15 87.0 131 45.0
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 1.3e-15 87.0 102 47.1
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 1.3e-15 87.0 133 42.9
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.8e-15 85.9 143 37.1
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 3.7e-15 85.5 76 55.3
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 6.3e-15 84.7 101 44.6
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 8.3e-15 84.3 143 37.1
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.8e-14 83.2 143 36.4
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 5.4e-14 81.6 128 41.4
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 1.2e-13 80.5 60 65.0
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.2e-13 80.5 143 35.7
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 2.7e-13 79.3 139 41.7
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 3.5e-13 79.0 144 36.8
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 1.0e-12 77.4 128 42.2
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 1.3e-12 77.0 119 43.7
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 1.7e-12 76.6 98 40.8
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 2.3e-12 76.3 109 45.0
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 3.8e-12 75.5 137 35.0
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 3.8e-12 75.5 109 45.0
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 5.0e-12 75.1 134 39.6
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 8.6e-12 74.3 130 37.7
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 8.6e-12 74.3 136 36.0
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 1.5e-11 73.6 138 42.0
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 1.9e-11 73.2 135 37.8
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 2.5e-11 72.8 62 61.3
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 4.3e-11 72.0 76 50.0
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 5.6e-11 71.6 139 38.8
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 7.3e-11 71.2 112 42.9
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 9.5e-11 70.9 84 50.0
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 2.8e-10 69.3 123 39.8
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 2.8e-10 69.3 116 41.4
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 4.7e-10 68.6 115 38.3
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 6.1e-10 68.2 146 37.0
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 8.0e-10 67.8 104 43.3
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 1.0e-09 67.4 114 39.5
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 1.4e-09 67.0 141 34.0
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 1.4e-09 67.0 133 38.3
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 1.8e-09 66.6 135 38.5
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 2.3e-09 66.2 116 37.9
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 3.1e-09 65.9 121 38.8
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 3.1e-09 65.9 144 33.3
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 5.2e-09 65.1 138 37.7
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 6.8e-09 64.7 99 42.4
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 6.8e-09 64.7 139 35.3
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 6.8e-09 64.7 144 37.5
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 6.8e-09 64.7 62 50.0
Cfa011213 Carpinus fangiana HOM05D018442 ORTHO05D020347 1.5e-08 63.5 99 41.4
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 2.0e-08 63.2 127 35.4
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 2.6e-08 62.8 125 34.4
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 3.4e-08 62.4 60 50.0
Haze_02631 Corylus avellana HOM05D007333 ORTHO05D008874 5.8e-08 61.6 132 36.4
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 5.8e-08 61.6 61 52.5
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 1.3e-07 60.5 129 34.1
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 1.7e-07 60.1 49 55.1
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 2.2e-07 59.7 82 41.5
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 2.2e-07 59.7 135 36.3
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 2.2e-07 59.7 135 36.3
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 2.9e-07 59.3 95 38.9
QL04p040607 Quercus lobata HOM05D007333 ORTHO05D008874 4.9e-07 58.5 106 38.7
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 6.4e-07 58.2 124 35.5
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 1.1e-06 57.4 135 36.3
Nn6g35090 Nelumbo nucifera HOM05D007333 ORTHO05D008874 1.9e-06 56.6 39 59.0
Sed0004459 Sechium edule HOM05D027254 ORTHO05D028888 4.1e-06 55.5 88 37.5
Ciclev10010649m.g Citrus clementina HOM05D007333 ORTHO05D008874 5.4e-06 55.1 110 40.0
Ciclev10029520m.g Citrus clementina HOM05D007333 ORTHO05D008874 5.4e-06 55.1 112 39.3
QL08p037183 Quercus lobata HOM05D018442 ORTHO05D020347 9.2e-06 54.3 88 35.2


User provided reference genes

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