Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc128.51 Carica papaya HOM05D006575 ORTHO05D008251 4.8e-106 387.9 202 100.0
Atru.chr12.966 Acer truncatum HOM05D006575 ORTHO05D008251 4.8e-29 132.1 104 63.5
TWI38G0941 Tripterygium wilfordii HOM05D006575 ORTHO05D008251 8.1e-29 131.3 121 58.7
QL04p041148 Quercus lobata HOM05D006575 ORTHO05D008251 1.8e-28 130.2 119 57.1
Prupe.2G089200 Prunus persica HOM05D006575 ORTHO05D008251 3.1e-28 129.4 122 59.0
Thhalv10013565m.g Eutrema salsugineum HOM05D006575 ORTHO05D008251 1.2e-27 127.5 121 57.9
Sp6g38170 Schrenkiella parvula HOM05D006575 ORTHO05D008251 1.2e-27 127.5 120 57.5
CiPaw.14G028500 Carya illinoinensis HOM05D006575 ORTHO05D008251 2.6e-27 126.3 119 57.1
THA.LOC104816459 Tarenaya hassleriana HOM05D006575 ORTHO05D008251 4.5e-27 125.6 116 56.9
COL.COLO4_27239 Corchorus olitorius HOM05D006575 ORTHO05D008251 9.9e-27 124.4 125 56.0
Sabra10G0181900 Salix brachista HOM05D006575 ORTHO05D008251 2.9e-26 122.9 120 55.0
Potri.010G234600 Populus trichocarpa HOM05D006575 ORTHO05D008251 3.8e-26 122.5 120 56.7
Aa31LG11G5480 Aethionema arabicum HOM05D006575 ORTHO05D008251 4.9e-26 122.1 120 54.2
Carub.0006s0353 Capsella rubella HOM05D006575 ORTHO05D008251 8.4e-26 121.3 121 57.9
CARHR208680 Cardamine hirsuta HOM05D006575 ORTHO05D008251 8.4e-26 121.3 120 55.8
AL6G14240 Arabidopsis lyrata HOM05D006575 ORTHO05D008251 1.4e-25 120.6 121 57.0
Haze_02613 Corylus avellana HOM05D006575 ORTHO05D008251 3.2e-25 119.4 119 53.8
Manes.07G130800 Manihot esculenta HOM05D006575 ORTHO05D008251 4.2e-25 119.0 120 55.8
RcHm_v2.0_Chr1g0334121 Rosa chinensis HOM05D006575 ORTHO05D008251 5.4e-25 118.6 124 54.8
Ciclev10031399m.g Citrus clementina HOM05D006575 ORTHO05D008251 1.2e-24 117.5 127 55.1
A10p31490 Brassica napus HOM05D006575 ORTHO05D008251 1.6e-24 117.1 119 56.3
BraA10t45195Z Brassica rapa HOM05D006575 ORTHO05D008251 1.6e-24 117.1 119 56.3
MD07G1071500 Malus domestica HOM05D006575 ORTHO05D008251 1.6e-24 117.1 124 56.5
BcaC06g32169 Brassica carinata HOM05D006575 ORTHO05D008251 7.9e-24 114.8 119 56.3
BolC9t59962H Brassica oleracea HOM05D006575 ORTHO05D008251 7.9e-24 114.8 119 56.3
Thecc.10G101600 Theobroma cacao HOM05D006575 ORTHO05D008251 1.0e-23 114.4 126 51.6
C09p72180 Brassica napus HOM05D006575 ORTHO05D008251 1.3e-23 114.0 97 61.9
FvH4_7g06280 Fragaria vesca HOM05D006575 ORTHO05D008251 5.1e-23 112.1 119 52.1
CsaV3_3G002140 Cucumis sativus L. HOM05D006575 ORTHO05D008251 1.9e-22 110.2 120 54.2
Duzib114G1029 Durio zibethinus HOM05D006575 ORTHO05D008251 3.3e-22 109.4 133 48.1
Nn6g35050 Nelumbo nucifera HOM05D006575 ORTHO05D008251 3.3e-22 109.4 128 50.8
AT5G04610 Arabidopsis thaliana HOM05D006575 ORTHO05D008251 7.4e-22 108.2 121 53.7
Lj5g0027739 Lotus japonicus HOM05D006575 ORTHO05D008251 7.4e-22 108.2 105 53.3
MELO3C013886.2 Cucumis melo HOM05D006575 ORTHO05D008251 9.6e-22 107.8 120 53.3
GSVIVG01034712001 Vitis vinifera HOM05D006575 ORTHO05D008251 9.6e-22 107.8 123 49.6
Psat6g093080 Pisum sativum HOM05D006575 ORTHO05D008251 1.6e-21 107.1 95 57.9
ClCG00G004800 Citrullus lanatus HOM05D006575 ORTHO05D008251 2.8e-21 106.3 120 51.7
ClCG10G002050 Citrullus lanatus HOM05D006575 ORTHO05D008251 2.8e-21 106.3 120 51.7
Lalb_Chr01g0010311 Lupinus albus HOM05D006575 ORTHO05D008251 4.8e-21 105.5 120 51.7
Ah.00g000570 Amaranthus hybridus HOM05D006575 ORTHO05D008251 1.1e-20 104.4 126 45.2
Ca_05248_v3 Cicer arietinum L. HOM05D006575 ORTHO05D008251 1.1e-20 104.4 112 51.8
Cc02_g10220 Coffea canephora HOM05D006575 ORTHO05D008251 1.8e-20 103.6 135 43.7
Nitab4.5_0001807g0050 Nicotiana tabacum HOM05D006575 ORTHO05D008251 2.4e-20 103.2 125 45.6
Dinv30658 Davidia involucrata HOM05D006575 ORTHO05D008251 4.0e-20 102.4 133 46.6
Glyma.01G147000 Glycine max HOM05D006575 ORTHO05D008251 4.0e-20 102.4 87 60.9
PGR142G1213 Punica granatum HOM05D006575 ORTHO05D008251 5.3e-20 102.1 95 56.8
Gorai.006G244900 Gossypium raimondii HOM05D006575 ORTHO05D008251 6.9e-20 101.7 128 49.2
Nitab4.5_0002259g0040 Nicotiana tabacum HOM05D006575 ORTHO05D008251 1.5e-19 100.5 126 45.2
Sed0005632 Sechium edule HOM05D006575 ORTHO05D008251 1.5e-19 100.5 123 49.6
DCAR_019027 Daucus carota HOM05D006575 ORTHO05D008251 2.6e-19 99.8 122 49.2
Glyma.10G113000 Glycine max HOM05D006575 ORTHO05D008251 2.6e-19 99.8 87 59.8
Peaxi162Scf00244g00053 Petunia axillaris HOM05D006575 ORTHO05D008251 2.6e-19 99.8 109 46.8
TAR623G0136 Trochodendron aralioides HOM05D006575 ORTHO05D008251 3.4e-19 99.4 126 46.0
VMungo0720G0428 Vigna mungo HOM05D006575 ORTHO05D008251 3.4e-19 99.4 107 51.4
Phvul.007G246400 Phaseolus vulgaris HOM05D006575 ORTHO05D008251 4.5e-19 99.0 88 60.2
Solyc11g007550.1 Solanum lycopersicum HOM05D006575 ORTHO05D008251 4.5e-19 99.0 126 46.0
arahy.Tifrunner.gnm1.ann1.G6FTBS Arachis hypogaea HOM05D006575 ORTHO05D008251 5.8e-19 98.6 105 49.5
CSS0046856 Camellia sinensis var. sinensis HOM05D006575 ORTHO05D008251 7.6e-19 98.2 132 43.9
Aqoxy1G00940 Aquilegia oxysepala HOM05D006575 ORTHO05D008251 1.0e-18 97.8 127 43.3
Hma1.2p1_0567F.1_g180090 Hydrangea macrophylla HOM05D006575 ORTHO05D008251 1.0e-18 97.8 123 47.2
BcaC06g32171 Brassica carinata HOM05D006575 ORTHO05D008251 1.3e-18 97.4 83 62.7
SHI21275 Sapria himalayana HOM05D006575 ORTHO05D008251 2.2e-18 96.7 120 45.8
Sopen11g003390 Solanum pennellii HOM05D006575 ORTHO05D008251 2.2e-18 96.7 128 46.1
PGSC0003DMG400027314 Solanum tuberosum HOM05D006575 ORTHO05D008251 2.2e-18 96.7 128 45.3
CANSAT56G2424 Cannabis sativa HOM05D006575 ORTHO05D008251 2.9e-18 96.3 104 49.0
Medtr1g050528 Medicago truncatula HOM05D006575 ORTHO05D008251 3.8e-18 95.9 109 50.5
Sc20g0001310 Simmondsia chinensis HOM05D006575 ORTHO05D008251 3.8e-18 95.9 136 41.2
Lsat_1_v5_gn_2_102621 Lactuca sativa HOM05D006575 ORTHO05D008251 8.4e-18 94.7 158 43.7
Oeu030489.1 Olea europaea HOM05D006575 ORTHO05D008251 1.9e-17 93.6 124 49.2
MELO3C019882.2 Cucumis melo HOM05D006575 ORTHO05D008251 2.5e-17 93.2 101 50.5
TPR.G22706 Trifolium pratense HOM05D006575 ORTHO05D008251 4.2e-17 92.4 91 54.9
CAN.G135.74 Capsicum annuum HOM05D006575 ORTHO05D008251 1.6e-16 90.5 122 45.1
Lsat_1_v5_gn_2_6840 Lactuca sativa HOM05D006575 ORTHO05D008251 2.1e-16 90.1 129 42.6
HanXRQChr14g0456911 Helianthus annuus HOM05D006575 ORTHO05D008251 2.7e-16 89.7 124 45.2
PSO349G0192 Papaver somniferum HOM05D006575 ORTHO05D008251 1.3e-15 87.4 132 41.7
ATR0820G127 Amborella trichopoda HOM05D006575 ORTHO05D008251 5.1e-15 85.5 127 40.9
PSO765G0131 Papaver somniferum HOM05D006575 ORTHO05D008251 8.7e-15 84.7 133 41.4
CDE11G0034 Ceratophyllum demersum HOM05D006575 ORTHO05D008251 1.5e-14 84.0 124 42.7
MSTRG.411 Avicennia marina HOM05D006575 ORTHO05D008251 4.3e-14 82.4 108 45.4
Lsat_1_v5_gn_2_102500 Lactuca sativa HOM05D006575 ORTHO05D008251 1.3e-13 80.9 127 41.7
ECA238G0587 Erigeron canadensis HOM05D006575 ORTHO05D008251 2.1e-13 80.1 126 42.1
Lsat_1_v5_gn_2_102541 Lactuca sativa HOM05D006575 ORTHO05D008251 2.1e-13 80.1 120 41.7
Migut.F01657 Erythranthe guttata HOM05D006575 ORTHO05D008251 2.8e-13 79.7 94 47.9
SGA_v2.0_scaffold8G04418 Striga asiatica HOM05D006575 ORTHO05D008251 2.8e-13 79.7 120 40.8
AUR62036741 Chenopodium quinoa HOM05D006575 ORTHO05D008251 6.2e-13 78.6 70 52.9
unitig_578.g16358 Utricularia gibba HOM05D006575 ORTHO05D008251 6.2e-13 78.6 124 40.3
EL10Ac1g02057 Beta vulgaris HOM05D006575 ORTHO05D008251 1.1e-12 77.8 70 52.9
Cfa011222 Carpinus fangiana HOM05D006575 ORTHO05D008251 2.4e-12 76.6 68 55.9
AUR62013857 Chenopodium quinoa HOM05D006575 ORTHO05D008251 4.1e-12 75.9 70 51.4
Lsat_1_v5_gn_2_102601 Lactuca sativa HOM05D006575 ORTHO05D008251 4.1e-12 75.9 123 43.1
MBI17_g15051_MAGBIO Magnolia biondii HOM05D006575 ORTHO05D008251 4.1e-12 75.9 123 40.7
Solyc11g007820.1 Solanum lycopersicum HOM05D006575 ORTHO05D008251 4.1e-12 75.9 122 41.8
MBI17_g11659_MAGBIO Magnolia biondii HOM05D006575 ORTHO05D008251 5.3e-12 75.5 123 40.7
Sopen11g003680 Solanum pennellii HOM05D006575 ORTHO05D008251 5.3e-12 75.5 120 40.8
HPP92_005460 Vanilla planifolia HOM05D006575 ORTHO05D008251 9.0e-12 74.7 101 44.6
Rhsim03G0106300 Rhododendron simsii HOM05D006575 ORTHO05D008251 1.2e-11 74.3 132 40.2
Eucgr.G02713 Eucalyptus grandis HOM05D006575 ORTHO05D008251 3.4e-11 72.8 60 56.7
Zm00001eb035650 Zea mays HOM05D006575 ORTHO05D008251 4.5e-11 72.4 127 40.9
Sabra08G0017500 Salix brachista HOM05D006575 ORTHO05D008251 1.0e-10 71.2 79 48.1
Actinidia18575 Actinidia chinensis HOM05D006575 ORTHO05D008251 2.9e-10 69.7 70 51.4
SEGI_07264 Sequoiadendron giganteum HOM05D006575 ORTHO05D008251 1.4e-09 67.4 117 41.9
CsaV3_2G032970 Cucumis sativus L. HOM05D006575 ORTHO05D008251 3.5e-08 62.8 71 47.9
Os08g0520400 Oryza sativa ssp. japonica HOM05D006575 ORTHO05D008251 6.1e-08 62.0 109 38.5
Lj2C27T14 Lonicera japonica HOM05D006575 ORTHO05D008251 1.8e-07 60.5 70 50.0
RcHm_v2.0_Chr1g0335101 Rosa chinensis HOM05D006575 ORTHO05D008251 4.3e-06 55.8 36 69.4


User provided reference genes

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