Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc1265.1 Carica papaya HOM05D000014 ORTHO05D000016 4.8e-34 147.1 68 100.0
Cpa.g.sc82.72 Carica papaya HOM05D000014 ORTHO05D000016 4.0e-20 100.9 67 73.1
Cpa.g.sc60.73 Carica papaya HOM05D030452 ORTHO05D000016 3.7e-18 94.4 67 70.1
Cpa.g.sc4.147 Carica papaya HOM05D000014 ORTHO05D000016 3.8e-15 84.3 67 53.7
Cpa.g.sc4.33 Carica papaya HOM05D000014 ORTHO05D000016 5.0e-15 84.0 68 60.3
Cpa.g.sc61.8 Carica papaya HOM05D008054 ORTHO05D000016 6.5e-15 83.6 59 66.1
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 1.1e-14 82.8 67 58.2
CANSAT78G2394 Cannabis sativa HOM05D000014 ORTHO05D000016 2.5e-14 81.6 67 56.7
CANSAT80G1312 Cannabis sativa HOM05D000014 ORTHO05D000016 2.5e-14 81.6 67 56.7
Oeu021836.2 Olea europaea HOM05D000014 ORTHO05D000016 4.2e-14 80.9 67 52.2
Thecc.06G051900 Theobroma cacao HOM05D000014 ORTHO05D000016 5.5e-14 80.5 68 54.4
Thecc.01G254100 Theobroma cacao HOM05D000014 ORTHO05D000016 3.6e-13 77.8 60 56.7
CANSAT25G3548 Cannabis sativa HOM05D000014 ORTHO05D000016 8.0e-13 76.6 67 52.2
CANSAT80G0554 Cannabis sativa HOM05D000014 ORTHO05D000016 8.0e-13 76.6 67 52.2
CANSAT11G1067 Cannabis sativa HOM05D000014 ORTHO05D000016 1.0e-12 76.3 67 53.7
CANSAT56G0185 Cannabis sativa HOM05D000014 ORTHO05D000016 1.4e-12 75.9 67 53.7
Cpa.g.sc335.1 Carica papaya HOM05D012829 ORTHO05D000016 1.4e-12 75.9 56 67.9
CANSAT01G0424 Cannabis sativa HOM05D000014 ORTHO05D000016 2.3e-12 75.1 67 53.7
CANSAT01G0105 Cannabis sativa HOM05D000014 ORTHO05D000016 6.8e-12 73.6 67 50.7
Oeu047983.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-11 72.0 67 50.7
CANSAT01G2243 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-10 68.9 59 52.5
PGR031G1363 Punica granatum HOM05D000014 ORTHO05D000093 2.8e-10 68.2 67 50.7
arahy.Tifrunner.gnm1.ann1.Q96CMM Arachis hypogaea HOM05D000014 ORTHO05D000016 6.3e-10 67.0 55 49.1
Oeu025149.1 Olea europaea HOM05D000014 ORTHO05D000016 6.3e-10 67.0 67 49.3
arahy.Tifrunner.gnm1.ann1.81QANW Arachis hypogaea HOM05D000014 ORTHO05D000016 8.3e-10 66.6 55 49.1
Oeu034030.1 Olea europaea HOM05D000014 ORTHO05D000016 8.3e-10 66.6 67 49.3
CANSAT21G1138 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-09 66.2 59 52.5
AUR62014202 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.1e-09 66.2 54 59.3
AUR62031796 Chenopodium quinoa HOM05D000014 ORTHO05D000016 1.1e-09 66.2 67 49.3
arahy.Tifrunner.gnm1.ann1.I9FKSU Arachis hypogaea HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 41.8
Oeu054243.1 Olea europaea HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 47.8
PGR004G2403 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR013G0002 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR026G0002 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR031G1008 Punica granatum HOM05D000014 ORTHO05D000093 1.4e-09 65.9 67 49.3
PGR031G1161 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR031G1474 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR031G2833 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR031G3309 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR042G0004 Punica granatum HOM05D000014 ORTHO05D000093 1.4e-09 65.9 67 49.3
PGR042G2691 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR102G0067 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR102G0138 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR102G0846 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR102G1143 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR142G0256 Punica granatum HOM05D000014 ORTHO05D000093 1.4e-09 65.9 67 49.3
PGR142G0407 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR142G1132 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
PGR142G2478 Punica granatum HOM05D000014 ORTHO05D000016 1.4e-09 65.9 67 49.3
Cpa.g.sc0.8 Carica papaya HOM05D000014 ORTHO05D000016 1.8e-09 65.5 67 50.7
AUR62026440 Chenopodium quinoa HOM05D000014 ORTHO05D000016 1.8e-09 65.5 67 47.8
AUR62036886 Chenopodium quinoa HOM05D000014 ORTHO05D000016 1.8e-09 65.5 67 49.3
AUR62039888 Chenopodium quinoa HOM05D000014 ORTHO05D000016 1.8e-09 65.5 67 49.3
AUR62039883 Chenopodium quinoa HOM05D000014 ORTHO05D000016 2.4e-09 65.1 67 49.3
AUR62035174 Chenopodium quinoa HOM05D000014 ORTHO05D000016 4.1e-09 64.3 67 49.3
Manes.04G127160 Manihot esculenta HOM05D000014 ORTHO05D000016 4.1e-09 64.3 67 50.7
Oeu007323.1 Olea europaea HOM05D000014 ORTHO05D000016 4.1e-09 64.3 67 47.8
arahy.Tifrunner.gnm1.ann1.EQB169 Arachis hypogaea HOM05D000014 ORTHO05D000016 9.1e-09 63.2 55 45.5
AUR62041101 Chenopodium quinoa HOM05D000014 ORTHO05D000016 9.1e-09 63.2 67 46.3
arahy.Tifrunner.gnm1.ann1.2H52CR Arachis hypogaea HOM05D000014 ORTHO05D000016 1.2e-08 62.8 55 45.5
arahy.Tifrunner.gnm1.ann1.LW0R14 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.2e-08 62.8 55 45.5
arahy.Tifrunner.gnm1.ann1.X5U67K Arachis hypogaea HOM05D000014 ORTHO05D000016 1.2e-08 62.8 55 45.5
arahy.Tifrunner.gnm1.ann1.YYP60T Arachis hypogaea HOM05D000014 ORTHO05D000016 1.2e-08 62.8 55 45.5
Atru.chr2.557 Acer truncatum HOM05D000014 ORTHO05D000016 1.6e-08 62.4 67 43.3
arahy.Tifrunner.gnm1.ann1.LBDF62 Arachis hypogaea HOM05D000014 ORTHO05D000016 2.0e-08 62.0 55 45.5
arahy.Tifrunner.gnm1.ann1.N0JK03 Arachis hypogaea HOM05D000014 ORTHO05D000016 2.0e-08 62.0 67 38.8
AUR62022087 Chenopodium quinoa HOM05D000014 ORTHO05D000016 2.0e-08 62.0 67 46.3
Oeu017629.1 Olea europaea HOM05D000014 ORTHO05D000016 2.0e-08 62.0 67 46.3
CANSAT01G1394 Cannabis sativa HOM05D000014 ORTHO05D000016 2.7e-08 61.6 67 41.8
CANSAT78G2236 Cannabis sativa HOM05D000014 ORTHO05D000016 2.7e-08 61.6 67 41.8
arahy.Tifrunner.gnm1.ann1.9TN888 Arachis hypogaea HOM05D000014 ORTHO05D000016 3.5e-08 61.2 55 43.6
Oeu064136.1 Olea europaea HOM05D000014 ORTHO05D000016 3.5e-08 61.2 67 47.8
CANSAT78G0146 Cannabis sativa HOM05D000014 ORTHO05D000016 4.5e-08 60.8 67 41.8
Oeu009768.1 Olea europaea HOM05D000014 ORTHO05D000016 4.5e-08 60.8 67 44.8
CANSAT54G2205 Cannabis sativa HOM05D000014 ORTHO05D000016 5.9e-08 60.5 67 40.3
AUR62031272 Chenopodium quinoa HOM05D000014 ORTHO05D000016 5.9e-08 60.5 66 47.0
arahy.Tifrunner.gnm1.ann1.J83EUV Arachis hypogaea HOM05D000014 ORTHO05D000016 7.7e-08 60.1 55 49.1
Manes.07G068316 Manihot esculenta HOM05D000014 ORTHO05D000016 7.7e-08 60.1 67 44.8
Oeu039483.1 Olea europaea HOM05D000014 ORTHO05D000016 7.7e-08 60.1 68 47.1
arahy.Tifrunner.gnm1.ann1.TNV6EF Arachis hypogaea HOM05D000014 ORTHO05D000016 1.0e-07 59.7 55 43.6
PGR083G0640 Punica granatum HOM05D000014 ORTHO05D000016 1.0e-07 59.7 67 46.3
arahy.Tifrunner.gnm1.ann1.6CK6EB Arachis hypogaea HOM05D000014 ORTHO05D000016 1.3e-07 59.3 66 39.4
arahy.Tifrunner.gnm1.ann1.V7ESBJ Arachis hypogaea HOM05D000014 ORTHO05D000016 1.3e-07 59.3 55 49.1
arahy.Tifrunner.gnm1.ann1.B12FQA Arachis hypogaea HOM05D000014 ORTHO05D000016 2.3e-07 58.5 66 39.4
arahy.Tifrunner.gnm1.ann1.CUPE1C Arachis hypogaea HOM05D000014 ORTHO05D000016 2.3e-07 58.5 66 39.4
Oeu017422.1 Olea europaea HOM05D000014 ORTHO05D000016 2.3e-07 58.5 67 44.8
Atru.chr2.2726 Acer truncatum HOM05D000014 ORTHO05D000016 5.0e-07 57.4 66 43.9
CANSAT64G1133 Cannabis sativa HOM05D000014 ORTHO05D000016 5.0e-07 57.4 66 39.4
Oeu002512.1 Olea europaea HOM05D000014 ORTHO05D000016 5.0e-07 57.4 67 44.8
CANSAT78G1781 Cannabis sativa HOM05D000014 ORTHO05D000016 8.6e-07 56.6 67 38.8
Cpa.g.sc288.4 Carica papaya HOM05D000014 ORTHO05D000016 8.6e-07 56.6 43 67.4
TWI15G0694 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 8.6e-07 56.6 67 41.8
CANSAT11G1900 Cannabis sativa HOM05D000014 ORTHO05D000016 1.1e-06 56.2 67 40.3
Medtr0029s0220 Medicago truncatula HOM05D029435 ORTHO05D000016 1.1e-06 56.2 67 40.3
Medtr8g028605 Medicago truncatula HOM05D000014 ORTHO05D000016 1.1e-06 56.2 48 58.3
arahy.Tifrunner.gnm1.ann1.WHF8H5 Arachis hypogaea HOM05D000014 ORTHO05D000016 1.5e-06 55.8 55 45.5
CANSAT25G0834 Cannabis sativa HOM05D000014 ORTHO05D000016 1.5e-06 55.8 61 42.6
Manes.17G100851 Manihot esculenta HOM05D000014 ORTHO05D000016 1.9e-06 55.5 67 44.8
Oeu055875.1 Olea europaea HOM05D000014 ORTHO05D000016 1.9e-06 55.5 67 43.3
Oeu012344.1 Olea europaea HOM05D000014 ORTHO05D000016 2.5e-06 55.1 67 43.3
PGR042G3031 Punica granatum HOM05D000014 ORTHO05D000016 3.3e-06 54.7 57 49.1
arahy.Tifrunner.gnm1.ann1.7EH03T Arachis hypogaea HOM05D000014 ORTHO05D000016 5.5e-06 53.9 54 38.9
Cpa.g.sc2026.3 Carica papaya HOM05D000014 ORTHO05D000016 7.2e-06 53.5 68 44.1
Medtr0060s0110 Medicago truncatula HOM05D008802 ORTHO05D000016 7.2e-06 53.5 65 41.5
Oeu050542.1 Olea europaea HOM05D000014 ORTHO05D000016 9.5e-06 53.1 67 41.8


User provided reference genes

Program Settings