Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc126.5 Carica papaya HOM05D000833 ORTHO05D007016 5.6e-65 250.8 123 100.0
Dinv22946 Davidia involucrata HOM05D000833 ORTHO05D007016 3.6e-11 72.0 44 81.8
GSVIVG01035483001 Vitis vinifera HOM05D000833 ORTHO05D007016 3.6e-11 72.0 44 81.8
Eucgr.C03168 Eucalyptus grandis HOM05D000833 ORTHO05D007016 4.7e-11 71.6 44 84.1
MELO3C016919.2 Cucumis melo HOM05D000833 ORTHO05D007016 1.8e-10 69.7 44 79.5
Sabra18G0046300 Salix brachista HOM05D000833 ORTHO05D007016 1.8e-10 69.7 44 77.3
COL.COLO4_21154 Corchorus olitorius HOM05D000833 ORTHO05D007016 2.3e-10 69.3 40 82.5
Aqoxy7G04083 Aquilegia oxysepala HOM05D000833 ORTHO05D007016 3.9e-10 68.6 44 72.7
Duzib150G0319 Durio zibethinus HOM05D000833 ORTHO05D007016 5.1e-10 68.2 44 77.3
Thecc.09G064900 Theobroma cacao HOM05D000833 ORTHO05D007016 5.1e-10 68.2 44 77.3
Cc08_g01040 Coffea canephora HOM05D000833 ORTHO05D007016 6.7e-10 67.8 44 77.3
vmacro05237 Vaccinium macrocarpon HOM05D000833 ORTHO05D007016 6.7e-10 67.8 45 73.3
Lalb_Chr08g0244751 Lupinus albus HOM05D000833 ORTHO05D007016 8.8e-10 67.4 44 79.5
Prupe.1G403100 Prunus persica HOM05D000833 ORTHO05D007016 8.8e-10 67.4 44 77.3
Sabra06G0169400 Salix brachista HOM05D000833 ORTHO05D007016 8.8e-10 67.4 44 77.3
MD15G1048800 Malus domestica HOM05D000833 ORTHO05D007016 1.1e-09 67.0 44 77.3
Nn6g35709 Nelumbo nucifera HOM05D000833 ORTHO05D007016 1.1e-09 67.0 44 75.0
CSS0016644 Camellia sinensis var. sinensis HOM05D000833 ORTHO05D007016 1.5e-09 66.6 44 75.0
CSS0021641 Camellia sinensis var. sinensis HOM05D000833 ORTHO05D007016 1.5e-09 66.6 44 75.0
Cfa017862 Carpinus fangiana HOM05D000833 ORTHO05D007016 1.5e-09 66.6 44 77.3
PSO135G0376 Papaver somniferum HOM05D000833 ORTHO05D007016 1.5e-09 66.6 44 77.3
RcHm_v2.0_Chr6g0311991 Rosa chinensis HOM05D000833 ORTHO05D007016 1.5e-09 66.6 44 75.0
Actinidia29352 Actinidia chinensis HOM05D000833 ORTHO05D007016 2.0e-09 66.2 44 75.0
CsaV3_4G036110 Cucumis sativus L. HOM05D000833 ORTHO05D007016 2.6e-09 65.9 44 75.0
Duzib187G1248 Durio zibethinus HOM05D000833 ORTHO05D007016 2.6e-09 65.9 44 72.7
FvH4_2g30860 Fragaria vesca HOM05D000833 ORTHO05D007016 2.6e-09 65.9 44 75.0
FAN20G2685 Fragaria x ananassa HOM05D000833 ORTHO05D007016 2.6e-09 65.9 44 75.0
FAN27G2379 Fragaria x ananassa HOM05D000833 ORTHO05D007016 2.6e-09 65.9 44 75.0
Glyma.17G226700 Glycine max HOM05D000833 ORTHO05D007016 2.6e-09 65.9 44 77.3
Phvul.001G092700 Phaseolus vulgaris HOM05D000833 ORTHO05D007016 2.6e-09 65.9 44 77.3
VMungo0647G1882 Vigna mungo HOM05D000833 ORTHO05D007016 2.6e-09 65.9 44 77.3
MD08G1073000 Malus domestica HOM05D000833 ORTHO05D007016 3.3e-09 65.5 44 75.0
Sed0001154 Sechium edule HOM05D000833 ORTHO05D007016 3.3e-09 65.5 44 75.0
MBI13_g12062_MAGBIO Magnolia biondii HOM05D000833 ORTHO05D007016 4.4e-09 65.1 44 77.3
Potri.018G048600 Populus trichocarpa HOM05D000833 ORTHO05D007016 4.4e-09 65.1 44 70.5
Gohir.A05G038200 Gossypium hirsutum HOM05D000833 ORTHO05D007016 5.7e-09 64.7 44 72.7
Potri.006G219500 Populus trichocarpa HOM05D000833 ORTHO05D007016 5.7e-09 64.7 39 84.6
Sc23g0006080 Simmondsia chinensis HOM05D000833 ORTHO05D007016 5.7e-09 64.7 44 75.0
TAR636G0903 Trochodendron aralioides HOM05D000833 ORTHO05D007016 5.7e-09 64.7 44 75.0
CANSAT25G0768 Cannabis sativa HOM05D000833 ORTHO05D007016 7.4e-09 64.3 57 63.2
Lalb_Chr23g0268001 Lupinus albus HOM05D000833 ORTHO05D007016 7.4e-09 64.3 44 75.0
Psat5g034360 Pisum sativum HOM05D000833 ORTHO05D007016 7.4e-09 64.3 44 75.0
CAN.G6.2 Capsicum annuum HOM05D000833 ORTHO05D007016 9.7e-09 63.9 44 72.7
ClCG05G015820 Citrullus lanatus HOM05D000833 ORTHO05D007016 9.7e-09 63.9 44 75.0
Duzib168G1917 Durio zibethinus HOM05D000833 ORTHO05D007016 9.7e-09 63.9 44 72.7
Glyma.14G098000 Glycine max HOM05D000833 ORTHO05D007016 9.7e-09 63.9 44 75.0
TWI63G0400 Tripterygium wilfordii HOM05D000833 ORTHO05D007016 9.7e-09 63.9 44 72.7
FAN24G2397 Fragaria x ananassa HOM05D000833 ORTHO05D007016 1.3e-08 63.5 44 72.7
Oeu022789.1 Olea europaea HOM05D000833 ORTHO05D007016 1.3e-08 63.5 44 72.7
PGR044G1321 Punica granatum HOM05D000833 ORTHO05D007016 1.3e-08 63.5 44 75.0
Solyc08g061220.3 Solanum lycopersicum HOM05D000833 ORTHO05D007016 1.3e-08 63.5 44 72.7
Ciclev10008557m.g Citrus clementina HOM05D000833 ORTHO05D007016 1.7e-08 63.2 44 72.7
Haze_18310 Corylus avellana HOM05D000833 ORTHO05D007016 1.7e-08 63.2 39 82.1
Lj5g0011295 Lotus japonicus HOM05D000833 ORTHO05D007016 1.7e-08 63.2 44 72.7
Manes.03G054100 Manihot esculenta HOM05D000833 ORTHO05D007016 1.7e-08 63.2 44 72.7
TPR.G3524 Trifolium pratense HOM05D000833 ORTHO05D007016 1.7e-08 63.2 44 72.7
Atru.chr7.1834 Acer truncatum HOM05D000833 ORTHO05D007016 2.2e-08 62.8 44 75.0
Sopen08g016600 Solanum pennellii HOM05D000833 ORTHO05D007016 2.8e-08 62.4 44 70.5
PGSC0003DMG400012995 Solanum tuberosum HOM05D000833 ORTHO05D007016 2.8e-08 62.4 44 70.5
Ca_13118_v3 Cicer arietinum L. HOM05D000833 ORTHO05D007016 3.7e-08 62.0 44 72.7
Rhsim10G0108500 Rhododendron simsii HOM05D000833 ORTHO05D007016 3.7e-08 62.0 44 68.2
TPR.G13082 Trifolium pratense HOM05D000833 ORTHO05D007016 3.7e-08 62.0 44 72.7
Migut.A00063 Erythranthe guttata HOM05D000833 ORTHO05D007016 4.8e-08 61.6 42 71.4
Gohir.D05G039700 Gossypium hirsutum HOM05D000833 ORTHO05D007016 4.8e-08 61.6 44 70.5
Peaxi162Scf00486g00311 Petunia axillaris HOM05D000833 ORTHO05D007016 4.8e-08 61.6 44 70.5
Psat6g021680 Pisum sativum HOM05D000833 ORTHO05D007016 4.8e-08 61.6 44 72.7
Hund25566 Selenicereus undatus HOM05D000833 ORTHO05D007016 4.8e-08 61.6 45 71.1
Lsat_1_v5_gn_5_79340 Lactuca sativa HOM05D000833 ORTHO05D007016 6.3e-08 61.2 44 72.7
Ca_15828_v3 Cicer arietinum L. HOM05D000833 ORTHO05D007016 8.2e-08 60.8 58 56.9
Manes.16G086500 Manihot esculenta HOM05D000833 ORTHO05D007016 1.1e-07 60.5 42 71.4
Medtr1g015750 Medicago truncatula HOM05D000833 ORTHO05D007016 1.1e-07 60.5 44 70.5
Sed0007772 Sechium edule HOM05D000833 ORTHO05D007016 1.1e-07 60.5 44 70.5
CiPaw.15G091100 Carya illinoinensis HOM05D000833 ORTHO05D007016 1.4e-07 60.1 44 68.2
Gorai.009G040200 Gossypium raimondii HOM05D000833 ORTHO05D007016 1.4e-07 60.1 44 68.2
Thhalv10002013m.g Eutrema salsugineum HOM05D000833 ORTHO05D007016 1.8e-07 59.7 52 63.5
VMungo1309G2805 Vigna mungo HOM05D000833 ORTHO05D007016 1.8e-07 59.7 44 70.5
CiPaw.05G040200 Carya illinoinensis HOM05D000833 ORTHO05D007016 2.4e-07 59.3 50 60.0
Nitab4.5_0001576g0080 Nicotiana tabacum HOM05D000833 ORTHO05D007016 2.4e-07 59.3 44 68.2
CARHR115220 Cardamine hirsuta HOM05D000833 ORTHO05D007016 3.1e-07 58.9 42 76.2
Glyma.04G056600 Glycine max HOM05D000833 ORTHO05D007016 3.1e-07 58.9 44 70.5
BcaB08g35270 Brassica carinata HOM05D000833 ORTHO05D007016 4.1e-07 58.5 42 76.2
BcaC07g40828 Brassica carinata HOM05D000833 ORTHO05D007016 4.1e-07 58.5 42 76.2
A09p55310 Brassica napus HOM05D000833 ORTHO05D007016 4.1e-07 58.5 42 76.2
C08p38230 Brassica napus HOM05D000833 ORTHO05D007016 4.1e-07 58.5 42 76.2
BolC8t51398H Brassica oleracea HOM05D000833 ORTHO05D007016 4.1e-07 58.5 42 76.2
BraA09t40934Z Brassica rapa HOM05D000833 ORTHO05D007016 4.1e-07 58.5 42 76.2
DCAR_003723 Daucus carota HOM05D000833 ORTHO05D007016 4.1e-07 58.5 40 75.0
Sp4g06680 Schrenkiella parvula HOM05D000833 ORTHO05D007016 4.1e-07 58.5 42 76.2
THA.LOC104803708 Tarenaya hassleriana HOM05D000833 ORTHO05D007016 5.3e-07 58.2 41 73.2
Carub.0004s0619 Capsella rubella HOM05D000833 ORTHO05D007016 9.1e-07 57.4 42 73.8
HanXRQChr10g0310001 Helianthus annuus HOM05D000833 ORTHO05D007016 9.1e-07 57.4 44 70.5
Phvul.009G082900 Phaseolus vulgaris HOM05D000833 ORTHO05D007016 9.1e-07 57.4 44 68.2
SalBow4G1601 Salvia bowleyana HOM05D000833 ORTHO05D007016 9.1e-07 57.4 42 69.0
AL4G18920 Arabidopsis lyrata HOM05D000833 ORTHO05D007016 1.2e-06 57.0 42 73.8
AT2G26300 Arabidopsis thaliana HOM05D000833 ORTHO05D007016 1.2e-06 57.0 42 73.8
ECA234G4242 Erigeron canadensis HOM05D000833 ORTHO05D007016 1.2e-06 57.0 44 68.2
Glyma.06G057000 Glycine max HOM05D000833 ORTHO05D007016 1.2e-06 57.0 44 68.2
SGA_v2.0_scaffold20G09150 Striga asiatica HOM05D000833 ORTHO05D007016 1.2e-06 57.0 39 71.8
EL10Ac2g02407 Beta vulgaris HOM05D000833 ORTHO05D007016 2.0e-06 56.2 44 72.7
Nn8g38641 Nelumbo nucifera HOM05D000833 ORTHO05D007016 2.6e-06 55.8 50 64.0
Aa31LG5G9500 Aethionema arabicum HOM05D002027 ORTHO05D007016 4.5e-06 55.1 42 71.4
SGA_v2.0_scaffold64G21894 Striga asiatica HOM05D000833 ORTHO05D007016 4.5e-06 55.1 53 56.6
AUR62037724 Chenopodium quinoa HOM05D000833 ORTHO05D007016 7.7e-06 54.3 44 70.5


User provided reference genes

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