Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc126.45 Carica papaya HOM05D003860 ORTHO05D004218 1.9e-69 265.8 140 100.0
Actinidia05456 Actinidia chinensis HOM05D003860 ORTHO05D004218 4.6e-15 85.1 88 58.0
Manes.03G168100 Manihot esculenta HOM05D003860 ORTHO05D004218 6.0e-15 84.7 88 53.4
Atru.chr4.2181 Acer truncatum HOM05D003860 ORTHO05D004218 3.9e-14 82.0 107 47.7
CSS0040755 Camellia sinensis var. sinensis HOM05D003860 ORTHO05D004218 8.7e-14 80.9 96 53.1
Rhsim04G0189100 Rhododendron simsii HOM05D003860 ORTHO05D004218 1.1e-13 80.5 134 38.8
Rhsim02G0034600 Rhododendron simsii HOM05D003860 ORTHO05D004218 1.9e-13 79.7 72 56.9
QL06p016008 Quercus lobata HOM05D003860 ORTHO05D004218 2.1e-12 76.3 94 46.8
Oeu008802.1 Olea europaea HOM05D003860 ORTHO05D004218 8.2e-12 74.3 70 55.7
MD16G1211400 Malus domestica HOM05D003860 ORTHO05D004218 3.1e-11 72.4 100 45.0
Nitab4.5_0003331g0100 Nicotiana tabacum HOM05D003860 ORTHO05D004218 4.1e-11 72.0 64 53.1
Sabra08G0124700 Salix brachista HOM05D003860 ORTHO05D004218 4.1e-11 72.0 97 45.4
Lj3C795G8 Lonicera japonica HOM05D003860 ORTHO05D004218 5.3e-11 71.6 72 54.2
RcHm_v2.0_Chr5g0051721 Rosa chinensis HOM05D003860 ORTHO05D004218 5.3e-11 71.6 95 46.3
PGSC0003DMG400013397 Solanum tuberosum HOM05D003860 ORTHO05D004218 5.3e-11 71.6 64 53.1
Prupe.1G033500 Prunus persica HOM05D003860 ORTHO05D004218 6.9e-11 71.2 103 40.8
FvH4_3g28990 Fragaria vesca HOM05D003860 ORTHO05D004218 9.0e-11 70.9 98 42.9
FAN11G1859 Fragaria x ananassa HOM05D003860 ORTHO05D004218 1.2e-10 70.5 97 43.3
TAR365G0731 Trochodendron aralioides HOM05D003860 ORTHO05D004218 1.2e-10 70.5 88 48.9
Gohir.D04G018000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 1.5e-10 70.1 129 41.1
Nitab4.5_0000436g0080 Nicotiana tabacum HOM05D003860 ORTHO05D004218 1.5e-10 70.1 61 52.5
RcHm_v2.0_Chr4g0391121 Rosa chinensis HOM05D003860 ORTHO05D004218 2.0e-10 69.7 56 60.7
Ciclev10007055m.g Citrus clementina HOM05D003860 ORTHO05D004218 3.4e-10 68.9 101 43.6
Gohir.A05G398000 Gossypium hirsutum HOM05D003860 ORTHO05D004218 3.4e-10 68.9 129 39.5
Gorai.012G021000 Gossypium raimondii HOM05D003860 ORTHO05D004218 3.4e-10 68.9 129 41.1
Solyc03g005440.3 Solanum lycopersicum HOM05D003860 ORTHO05D004218 4.5e-10 68.6 64 51.6
arahy.Tifrunner.gnm1.ann1.5VC0H5 Arachis hypogaea HOM05D003860 ORTHO05D004218 7.6e-10 67.8 94 40.4
Hund04555 Selenicereus undatus HOM05D003860 ORTHO05D004218 7.6e-10 67.8 76 50.0
Duzib114G0251 Durio zibethinus HOM05D003860 ORTHO05D004218 1.3e-09 67.0 124 36.3
CiPaw.02G115700 Carya illinoinensis HOM05D003860 ORTHO05D004218 2.2e-09 66.2 130 35.4
FAN21G0272 Fragaria x ananassa HOM05D003860 ORTHO05D004218 2.2e-09 66.2 87 46.0
Ah.07g207450 Amaranthus hybridus HOM05D003860 ORTHO05D004218 2.9e-09 65.9 86 45.3
Sopen03g001470 Solanum pennellii HOM05D003860 ORTHO05D004218 2.9e-09 65.9 82 45.1
FAN25G1720 Fragaria x ananassa HOM05D003860 ORTHO05D004218 5.0e-09 65.1 72 48.6
Medtr4g032190 Medicago truncatula HOM05D003860 ORTHO05D004218 5.0e-09 65.1 141 35.5
Peaxi162Scf00024g00515 Petunia axillaris HOM05D003860 ORTHO05D004218 6.5e-09 64.7 61 45.9
arahy.Tifrunner.gnm1.ann1.IPZV7K Arachis hypogaea HOM05D003860 ORTHO05D004218 1.1e-08 63.9 94 38.3
FvH4_3g26751 Fragaria vesca HOM05D003860 ORTHO05D004218 1.4e-08 63.5 53 58.5
Thecc.04G247900 Theobroma cacao HOM05D003860 ORTHO05D004218 1.4e-08 63.5 88 43.2
COL.COLO4_20681 Corchorus olitorius HOM05D003860 ORTHO05D004218 4.2e-08 62.0 125 36.0
Potri.008G163500 Populus trichocarpa HOM05D003860 ORTHO05D004218 4.2e-08 62.0 89 44.9
Nn1g02668 Nelumbo nucifera HOM05D003860 ORTHO05D004218 5.5e-08 61.6 91 39.6
Peaxi162Scf00019g03122 Petunia axillaris HOM05D003860 ORTHO05D004218 5.5e-08 61.6 57 45.6
CANSAT78G0297 Cannabis sativa HOM05D003860 ORTHO05D004218 1.2e-07 60.5 87 42.5
Nitab4.5_0009720g0020 Nicotiana tabacum HOM05D003860 ORTHO05D004218 1.2e-07 60.5 69 40.6
Aqoxy2G03595 Aquilegia oxysepala HOM05D003860 ORTHO05D004218 2.1e-07 59.7 65 46.2
MSTRG.9921 Avicennia marina HOM05D003860 ORTHO05D004218 2.1e-07 59.7 83 42.2
EL10Ac3g05899 Beta vulgaris HOM05D003860 ORTHO05D004218 2.1e-07 59.7 93 41.9
RcHm_v2.0_Chr7g0211841 Rosa chinensis HOM05D003860 ORTHO05D004218 2.1e-07 59.7 46 60.9
Lj3g0013538 Lotus japonicus HOM05D003860 ORTHO05D004218 4.6e-07 58.5 81 42.0
CAN.G638.70 Capsicum annuum HOM05D003860 ORTHO05D004218 6.1e-07 58.2 96 39.6
Peaxi162Scf00204g00115 Petunia axillaris HOM05D003860 ORTHO05D004218 1.0e-06 57.4 117 31.6
Cc03_g05000 Coffea canephora HOM05D003860 ORTHO05D004218 1.8e-06 56.6 85 38.8
Psat7g227280 Pisum sativum HOM05D003860 ORTHO05D004218 1.8e-06 56.6 96 38.5
Sc19g0003450 Simmondsia chinensis HOM05D003860 ORTHO05D004218 3.0e-06 55.8 88 39.8
Glyma.12G000500 Glycine max HOM05D003860 ORTHO05D004218 3.9e-06 55.5 83 39.8
PSO724G0870 Papaver somniferum HOM05D003860 ORTHO05D004218 3.9e-06 55.5 52 51.9
TPR.G34114 Trifolium pratense HOM05D003860 ORTHO05D004218 3.9e-06 55.5 63 41.3
MELO3C026783.2 Cucumis melo HOM05D003860 ORTHO05D004218 6.7e-06 54.7 96 35.4
Eucgr.H03148 Eucalyptus grandis HOM05D003860 ORTHO05D004218 6.7e-06 54.7 99 38.4
Lalb_Chr03g0043921 Lupinus albus HOM05D003860 ORTHO05D004218 6.7e-06 54.7 71 36.6
AUR62015467 Chenopodium quinoa HOM05D003860 ORTHO05D004218 8.7e-06 54.3 93 39.8


User provided reference genes

Program Settings