Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 9.9e-62 240.0 123 100.0
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 1.6e-35 152.9 105 75.2
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 2.1e-35 152.5 103 74.8
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 3.5e-35 151.8 104 76.0
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 4.6e-35 151.4 103 74.8
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 6.0e-35 151.0 103 75.7
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 6.0e-35 151.0 103 75.7
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 2.3e-34 149.1 106 73.6
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 2.3e-34 149.1 106 73.6
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 5.1e-34 147.9 103 71.8
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 5.1e-34 147.9 104 74.0
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 5.1e-34 147.9 104 73.1
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 5.1e-34 147.9 104 75.0
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 6.7e-34 147.5 104 75.0
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 1.1e-33 146.7 103 72.8
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 1.1e-33 146.7 103 71.8
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 1.5e-33 146.4 104 76.0
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 1.5e-33 146.4 103 71.8
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 2.5e-33 145.6 104 72.1
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 2.5e-33 145.6 103 71.8
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 3.3e-33 145.2 103 71.8
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 3.3e-33 145.2 104 72.1
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 5.6e-33 144.4 103 70.9
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 5.6e-33 144.4 102 71.6
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 9.6e-33 143.7 104 73.1
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 9.6e-33 143.7 104 73.1
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 2.1e-32 142.5 104 72.1
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 2.1e-32 142.5 104 74.0
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 2.8e-32 142.1 104 72.1
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 2.8e-32 142.1 104 72.1
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 3.7e-32 141.7 104 72.1
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 4.8e-32 141.4 104 70.2
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 6.2e-32 141.0 105 70.5
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 1.1e-31 140.2 103 68.9
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 1.8e-31 139.4 104 71.2
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 4.0e-31 138.3 105 66.7
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 4.0e-31 138.3 103 68.9
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 5.3e-31 137.9 104 72.1
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 6.9e-31 137.5 104 69.2
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 9.0e-31 137.1 103 68.9
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 2.6e-30 135.6 103 68.9
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 1.7e-29 132.9 104 65.4
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 2.9e-29 132.1 104 64.4
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 2.9e-29 132.1 104 64.4
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 3.8e-29 131.7 104 66.3
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 3.8e-29 131.7 105 66.7
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 4.9e-29 131.3 104 64.4
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 4.9e-29 131.3 104 68.3
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 4.9e-29 131.3 105 66.7
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 4.9e-29 131.3 104 64.4
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 6.5e-29 131.0 104 63.5
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 8.4e-29 130.6 105 65.7
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 8.4e-29 130.6 104 68.3
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 1.4e-28 129.8 103 64.1
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 1.9e-28 129.4 104 65.4
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 1.9e-28 129.4 105 61.9
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 3.2e-28 128.6 103 63.1
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 3.2e-28 128.6 103 63.1
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 3.2e-28 128.6 104 66.3
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 4.2e-28 128.3 104 63.5
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 4.2e-28 128.3 103 64.1
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 5.5e-28 127.9 106 64.2
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 7.1e-28 127.5 78 80.8
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 7.1e-28 127.5 104 65.4
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 9.3e-28 127.1 104 64.4
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 9.3e-28 127.1 103 67.0
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 9.3e-28 127.1 103 63.1
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 9.3e-28 127.1 105 65.7
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 1.2e-27 126.7 103 63.1
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 1.2e-27 126.7 103 63.1
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 1.2e-27 126.7 103 63.1
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 2.1e-27 125.9 103 63.1
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 2.7e-27 125.6 103 64.1
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 3.5e-27 125.2 106 62.3
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 7.9e-27 124.0 105 62.9
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 7.9e-27 124.0 103 63.1
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 7.9e-27 124.0 106 65.1
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 1.3e-26 123.2 104 62.5
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 1.8e-26 122.9 104 58.7
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 2.3e-26 122.5 107 63.6
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 3.0e-26 122.1 104 63.5
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 5.1e-26 121.3 103 61.2
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 6.7e-26 120.9 104 61.5
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 8.7e-26 120.6 106 60.4
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 8.7e-26 120.6 107 58.9
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 8.7e-26 120.6 106 62.3
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 1.1e-25 120.2 103 61.2
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 2.5e-25 119.0 106 61.3
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 5.7e-25 117.9 104 59.6
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 5.7e-25 117.9 104 58.7
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 7.4e-25 117.5 85 70.6
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 9.7e-25 117.1 104 60.6
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 3.7e-24 115.2 109 60.6
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 7.2e-20 100.9 81 58.0
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 2.5e-17 92.4 81 55.6
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 8.2e-16 87.4 102 46.1
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 3.1e-15 85.5 59 69.5
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 5.3e-15 84.7 84 47.6
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 5.1e-10 68.2 81 42.0
Eucgr.C00726 Eucalyptus grandis HOM05D007323 ORTHO05D009238 9.7e-09 63.9 59 59.3


User provided reference genes

Program Settings